Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11530

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,462,342	+				-0.1
2,462,343	-				+0.5
2,462,525	-				-1.3
2,462,536	+				-0.0
2,462,537	-				-0.6
2,462,537	-				-0.3
2,462,537	-				+0.4
2,462,537	-				-2.2
2,462,537	-				-0.4
2,462,538	+				+0.1
2,462,538	+				-0.1
2,462,538	+				-1.7
2,462,538	+				-0.1
2,462,538	+				-0.4
2,462,538	+				-1.4
2,462,538	+				+0.1
2,462,538	+				-0.5
2,462,538	+				+0.1
2,462,538	+				+1.2
2,462,538	+				-0.9
2,462,538	+				-0.5
2,462,538	+				+0.6
2,462,538	+				+0.9
2,462,539	-				+0.9
2,462,539	-				+1.1
2,462,539	-				+0.9
2,462,539	-				+0.1
2,462,539	-				+1.1
2,462,539	-				+1.5
2,462,539	-				+0.1
2,462,539	-				+0.3
2,462,539	-				-0.9
2,462,539	-				+0.1
2,462,600	+		DZA65_RS11525	0.32	-1.4
2,462,600	+		DZA65_RS11525	0.32	-0.9
2,462,600	+		DZA65_RS11525	0.32	+0.8
2,462,601	-		DZA65_RS11525	0.32	+0.5
2,462,620	+		DZA65_RS11525	0.43	+0.2
2,462,621	-		DZA65_RS11525	0.43	+0.9
2,462,656	+		DZA65_RS11525	0.63	+0.3
2,462,656	+		DZA65_RS11525	0.63	-0.1
2,462,782	+				-1.2
2,462,783	-				+0.4
2,462,783	-				+0.7
2,462,891	+				+0.1
2,462,974	+				-2.2
2,463,032	+				-0.5
2,463,034	+				+0.1
2,463,035	-				-2.1
2,463,039	-				+1.0
2,463,079	+				+0.3
2,463,122	-				+1.1
2,463,125	-				+0.9
2,463,149	+				+1.0
2,463,150	-				-0.4
2,463,159	+				-0.7
2,463,161	+				-0.3
2,463,241	+		DZA65_RS11530	0.19	-0.3
2,463,271	-		DZA65_RS11530	0.24	-0.3
2,463,431	-		DZA65_RS11530	0.51	-2.1
2,463,431	-		DZA65_RS11530	0.51	-0.2
2,463,431	-		DZA65_RS11530	0.51	-1.3
2,463,443	-		DZA65_RS11530	0.53	-0.4
2,463,731	+				-0.0
2,463,731	+				+0.8
2,463,731	+				+0.7
2,463,732	-				-0.1
2,463,732	-				-0.2
2,463,732	-				+0.4
2,463,732	-				-0.9
2,463,732	-				+1.1
2,463,732	-				-1.1
2,463,732	-				+0.5
2,463,735	+				-0.3
2,463,735	+				+0.4
2,463,735	+				+1.4
2,463,736	-				-0.2
2,463,736	-				+0.4
2,463,736	-				+0.7
2,463,736	-				+0.1
2,463,818	+				+1.1
2,463,818	+				-0.7
2,463,818	+				+0.6
2,463,818	+				-0.6
2,463,819	-				+1.1
2,463,819	-				-0.2
2,463,819	-				+0.1
2,463,819	-				-0.2
2,463,889	+				-0.3
2,463,889	+				+0.4
2,463,889	+				+0.4
2,463,889	+				+1.1
2,463,889	+				-0.7
2,463,889	+				-0.7
2,463,889	+				-1.9
2,463,889	+				+0.1
2,463,889	+				+0.1
2,463,890	-				+1.1
2,463,890	-				-0.5
2,463,890	-				-0.5
2,463,890	-				-0.1
2,463,890	-				-0.5
2,463,890	-				+0.1
2,463,890	-				-0.5
2,463,890	-				-1.7
2,463,890	-				-0.8
2,463,899	-				-2.3
2,463,899	-				+0.6
2,463,950	-				+0.3
2,463,953	+				+2.0
2,463,953	+				-1.4
2,463,954	-				+0.6
2,463,955	+				-0.1
2,463,959	-				-0.1
2,463,985	+				-0.9
2,463,985	+				-0.7
2,463,986	-				+0.7
2,463,990	-				+0.7
2,464,010	+				+0.2
2,464,011	-				+2.1
2,464,054	+				+0.1
2,464,055	-				-0.9
2,464,055	-				-0.7
2,464,133	+				-0.2
2,464,312	+				+0.3
2,464,312	+				+0.5
2,464,312	+				+1.1
2,464,312	+				-1.7
2,464,312	+				+1.3
2,464,312	+				+0.2
2,464,312	+				+0.2
2,464,312	+				-1.7
2,464,312	+				-0.5
2,464,312	+				-1.4
2,464,312	+				+0.1
2,464,313	-				-0.6
2,464,313	-				-0.3
2,464,313	-				-0.2
2,464,313	-				-0.0
2,464,313	-				+0.1
2,464,313	-				+0.2
2,464,313	-				-3.2
2,464,313	-				-0.9
2,464,321	+				+0.9
2,464,322	-				-1.6
2,464,322	-				-1.2
2,464,322	-				-0.1
2,464,322	-				+0.6
2,464,322	-				-0.3
2,464,358	+				-0.6
2,464,358	+				-0.3
2,464,359	-				+0.4
2,464,359	-				-0.1
2,464,359	-				+0.4
2,464,359	-				-1.3
2,464,368	+				+1.7
2,464,368	+				+0.6
2,464,368	+				-0.1
2,464,368	+				-1.0
2,464,369	-				-0.6
2,464,369	-				-1.9
2,464,369	-				-2.7
2,464,369	-				+0.7
2,464,381	-				+1.4
2,464,381	-				-0.7
2,464,482	+		DZA65_RS11535	0.11	+0.4
2,464,482	+		DZA65_RS11535	0.11	+1.5
2,464,482	+		DZA65_RS11535	0.11	-1.9
2,464,483	-		DZA65_RS11535	0.11	+0.3
2,464,521	+		DZA65_RS11535	0.14	-0.2
2,464,537	+		DZA65_RS11535	0.16	-0.8
2,464,537	+		DZA65_RS11535	0.16	-0.2
2,464,537	+		DZA65_RS11535	0.16	+0.1
2,464,537	+		DZA65_RS11535	0.16	+0.5
2,464,537	+		DZA65_RS11535	0.16	-0.5
2,464,537	+		DZA65_RS11535	0.16	-0.2
2,464,537	+		DZA65_RS11535	0.16	-0.1
2,464,538	-		DZA65_RS11535	0.16	-1.2
2,464,538	-		DZA65_RS11535	0.16	+0.1
2,464,538	-		DZA65_RS11535	0.16	+0.9
2,464,538	-		DZA65_RS11535	0.16	-1.3
2,464,538	-		DZA65_RS11535	0.16	-1.4
2,464,538	-		DZA65_RS11535	0.16	+0.3
2,464,538	-		DZA65_RS11535	0.16	+0.1
2,464,538	-		DZA65_RS11535	0.16	+0.3
2,464,538	-		DZA65_RS11535	0.16	-0.4
2,464,538	-		DZA65_RS11535	0.16	-0.5
2,464,623	+		DZA65_RS11535	0.23	-0.9
2,464,623	+		DZA65_RS11535	0.23	-0.3
2,464,624	-		DZA65_RS11535	0.23	+1.1
2,464,624	-		DZA65_RS11535	0.23	-0.9