Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,395,557	-		DZA65_RS11270	0.86	+1.1
2,395,573	+		DZA65_RS11270	0.86	+1.3
2,395,779	+				+0.0
2,395,779	+				+0.4
2,395,780	-				+1.2
2,395,780	-				+0.4
2,395,780	-				+2.0
2,395,780	-				-0.0
2,395,782	+				+0.7
2,395,782	+				+0.5
2,395,782	+				+1.1
2,395,782	+				-0.5
2,395,783	-				-2.5
2,395,783	-				+1.0
2,395,783	-				+0.1
2,395,784	+				-1.1
2,395,784	+				+1.6
2,395,784	+				+1.4
2,395,784	+				+1.0
2,395,785	-				+0.3
2,395,785	-				+1.1
2,395,785	-				+1.5
2,395,785	-				+1.4
2,395,785	-				+0.5
2,395,785	-				+0.3
2,395,785	-				-0.0
2,395,785	-				+0.5
2,395,785	-				+0.7
2,395,785	-				+1.1
2,395,788	+				+1.1
2,395,788	+				+1.0
2,395,788	+				+0.1
2,395,788	+				+1.1
2,395,788	+				+1.3
2,395,788	+				-1.5
2,395,788	+				-0.0
2,395,788	+				+0.5
2,395,788	+				+0.4
2,395,788	+				+0.5
2,395,789	-				-0.0
2,395,789	-				+0.7
2,395,789	-				+1.1
2,395,789	-				+1.0
2,395,789	-				-0.1
2,395,789	-				+1.1
2,395,789	-				-0.2
2,395,789	-				-0.5
2,395,789	-				+0.9
2,395,789	-				-0.7
2,395,789	-				+1.2
2,395,801	+				+0.5
2,395,801	+				+0.6
2,395,802	-				+1.3
2,395,802	-				-0.5
2,395,836	+				+1.2
2,395,853	+				+0.1
2,395,958	-				-2.0
2,395,958	-				-0.9
2,395,981	+				+0.3
2,395,982	-				+0.1
2,396,033	+				+0.8
2,396,063	+				-0.2
2,396,069	+				-0.8
2,396,082	+				-2.2
2,396,082	+				+0.3
2,396,083	-				-2.2
2,396,083	-				+0.0
2,396,099	+				-0.6
2,396,100	-				-2.3
2,396,114	+				+0.5
2,396,115	-				-0.4
2,396,115	-				-1.1
2,396,115	-				+0.3
2,396,155	+				-1.3
2,396,155	+				+0.8
2,396,156	-				-3.6
2,396,156	-				-0.5
2,396,174	+				-0.4
2,396,187	-				+1.1
2,396,187	-				-1.5
2,396,192	+				-0.9
2,396,193	-				-0.2
2,396,193	-				+0.1
2,396,193	-				-0.1
2,396,263	+				-0.3
2,396,263	+				-1.1
2,396,263	+				-1.5
2,396,318	+				+0.4
2,396,318	+				-1.0
2,396,318	+				-0.2
2,396,319	-				-0.5
2,396,322	+				+0.3
2,396,322	+				+0.6
2,396,322	+				-0.6
2,396,322	+				+0.6
2,396,323	-				+0.1
2,396,323	-				+0.0
2,396,323	-				-0.2
2,396,323	-				+0.1
2,396,346	+				+0.7
2,396,347	-				+0.9
2,396,355	+				-1.0
2,396,417	+				-0.6
2,396,417	+				-0.3
2,396,492	+				+1.1
2,396,492	+				-0.3
2,396,506	+				+1.4
2,396,506	+				+0.1
2,396,506	+				+0.1
2,396,507	-				+0.6
2,396,507	-				-0.9
2,396,512	+				-0.3
2,396,513	-				-0.6
2,396,513	-				+0.8
2,396,563	+		DZA65_RS11275	0.14	-0.3
2,396,612	+		DZA65_RS11275	0.24	+0.1
2,396,613	-		DZA65_RS11275	0.25	+1.7
2,397,075	-				+1.5
2,397,075	-				-0.1
2,397,107	-				+0.1
2,397,167	+		DZA65_RS11280	0.12	+1.6
2,397,167	+		DZA65_RS11280	0.12	-1.7
2,397,238	+		DZA65_RS11280	0.15	-1.1
2,397,253	+		DZA65_RS11280	0.16	-0.3
2,397,288	+		DZA65_RS11280	0.18	+0.5
2,397,288	+		DZA65_RS11280	0.18	-0.2
2,397,288	+		DZA65_RS11280	0.18	+0.4
2,397,289	-		DZA65_RS11280	0.18	-1.5
2,397,292	+		DZA65_RS11280	0.18	-0.3
2,397,292	+		DZA65_RS11280	0.18	-1.2
2,397,292	+		DZA65_RS11280	0.18	+0.5
2,397,292	+		DZA65_RS11280	0.18	+0.4
2,397,293	-		DZA65_RS11280	0.18	-1.2
2,397,293	-				-0.9
2,397,320	+		DZA65_RS11280	0.20	+0.4
2,397,321	-		DZA65_RS11280	0.20	+1.3
2,397,409	+		DZA65_RS11280	0.25	-2.2
2,397,409	+		DZA65_RS11280	0.25	-1.9
2,397,410	-		DZA65_RS11280	0.25	+0.4
2,397,411	+		DZA65_RS11280	0.25	-0.8
2,397,412	-		DZA65_RS11280	0.25	+0.9
2,397,412	-		DZA65_RS11280	0.25	-1.1
2,397,446	-		DZA65_RS11280	0.27	-0.5
2,397,484	+		DZA65_RS11280	0.29	-0.2
2,397,485	-		DZA65_RS11280	0.29	-2.2
2,397,485	-		DZA65_RS11280	0.29	-0.5
2,397,485	-		DZA65_RS11280	0.29	-1.2
2,397,511	+		DZA65_RS11280	0.30	-1.0
2,397,511	+		DZA65_RS11280	0.30	-0.8
2,397,511	+		DZA65_RS11280	0.30	-1.7
2,397,512	-		DZA65_RS11280	0.30	+0.8
2,397,512	-		DZA65_RS11280	0.30	+0.9
2,397,512	-		DZA65_RS11280	0.30	-0.6
2,397,607	-		DZA65_RS11280	0.36	+0.0
2,397,776	-		DZA65_RS11280	0.45	-0.9
2,397,901	+		DZA65_RS11280	0.52	+1.3
2,397,901	+		DZA65_RS11280	0.52	-2.7
2,397,901	+		DZA65_RS11280	0.52	-0.2
2,397,902	-		DZA65_RS11280	0.52	+0.9
2,397,955	+		DZA65_RS11280	0.54	+1.5
2,397,955	+		DZA65_RS11280	0.54	-0.6
2,397,955	+		DZA65_RS11280	0.54	-1.5
2,397,955	+		DZA65_RS11280	0.54	+0.0
2,397,955	+		DZA65_RS11280	0.54	+1.1
2,397,955	+		DZA65_RS11280	0.54	+0.1
2,397,956	-		DZA65_RS11280	0.55	+1.4
2,397,956	-		DZA65_RS11280	0.55	-0.1
2,397,956	-		DZA65_RS11280	0.55	+1.2