Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11150

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,363,081	+		DZA65_RS11145	0.41	-0.2
2,363,082	-		DZA65_RS11145	0.41	+1.3
2,363,091	+		DZA65_RS11145	0.42	-1.7
2,363,151	+		DZA65_RS11145	0.47	-2.9
2,363,151	+		DZA65_RS11145	0.47	+0.6
2,363,165	+		DZA65_RS11145	0.48	-1.0
2,363,247	-		DZA65_RS11145	0.54	-1.0
2,363,247	-		DZA65_RS11145	0.54	-1.2
2,363,321	+		DZA65_RS11145	0.61	-0.0
2,363,352	+		DZA65_RS11145	0.63	-1.1
2,363,392	+		DZA65_RS11145	0.66	+0.1
2,363,392	+		DZA65_RS11145	0.66	-2.4
2,363,392	+		DZA65_RS11145	0.66	+0.3
2,363,393	-		DZA65_RS11145	0.66	+0.5
2,363,393	-		DZA65_RS11145	0.66	-0.1
2,363,470	+		DZA65_RS11145	0.73	-0.3
2,363,763	+				-2.2
2,363,763	+				-2.4
2,363,764	-				+0.1
2,363,764	-				+0.8
2,363,764	-				+0.6
2,363,764	-				+0.5
2,363,783	+				+0.3
2,363,783	+				+0.6
2,363,783	+				-0.2
2,363,814	+				-0.9
2,363,815	-				+0.6
2,363,827	-				-0.6
2,363,932	+				-0.1
2,363,933	-				-1.4
2,363,933	-				+0.1
2,363,949	-				-0.6
2,363,996	+				+0.4
2,363,996	+				+1.8
2,364,093	+		DZA65_RS11150	0.16	-0.5
2,364,095	+		DZA65_RS11150	0.16	-0.9
2,364,095	+		DZA65_RS11150	0.16	+0.7
2,364,095	+		DZA65_RS11150	0.16	+1.9
2,364,095	+		DZA65_RS11150	0.16	+0.7
2,364,096	-		DZA65_RS11150	0.17	+1.1
2,364,140	+		DZA65_RS11150	0.23	+0.6
2,364,255	+		DZA65_RS11150	0.40	+0.7
2,364,255	+		DZA65_RS11150	0.40	-0.2
2,364,255	+		DZA65_RS11150	0.40	-0.4
2,364,256	-		DZA65_RS11150	0.40	-0.2
2,364,256	-		DZA65_RS11150	0.40	+1.6
2,364,256	-		DZA65_RS11150	0.40	+0.3
2,364,256	-		DZA65_RS11150	0.40	+0.3
2,364,336	-		DZA65_RS11150	0.52	-0.9
2,364,361	-		DZA65_RS11150	0.56	+0.5
2,364,361	-		DZA65_RS11150	0.56	+1.6
2,364,425	+		DZA65_RS11150	0.65	+1.1
2,364,425	+		DZA65_RS11150	0.65	-0.6
2,364,425	+		DZA65_RS11150	0.65	-0.2
2,364,426	-		DZA65_RS11150	0.66	+0.1
2,364,426	-		DZA65_RS11150	0.66	-0.3
2,364,426	-		DZA65_RS11150	0.66	-0.7
2,364,426	-		DZA65_RS11150	0.66	+0.4
2,364,522	+		DZA65_RS11150	0.80	+1.7
2,364,522	+		DZA65_RS11150	0.80	+0.5
2,364,522	+		DZA65_RS11150	0.80	-0.4
2,364,522	+		DZA65_RS11150	0.80	+1.3
2,364,523	-		DZA65_RS11150	0.80	-0.6
2,364,523	-		DZA65_RS11150	0.80	+0.3
2,364,523	-		DZA65_RS11150	0.80	-0.0
2,364,621	+				-0.6
2,364,621	+				+1.0
2,364,622	-				+0.7
2,364,622	-				-0.6
2,364,622	-				-0.7
2,364,641	+				-1.6
2,364,641	+				+0.3
2,364,642	-				+0.4
2,364,654	+				+0.5
2,364,654	+				+0.5
2,364,654	+				-0.2
2,364,655	-				-0.6
2,364,816	+				+0.8
2,364,817	-				+1.3
2,364,817	-				+0.1
2,364,891	+				-0.3
2,364,892	-				+1.7
2,364,992	-		DZA65_RS11155	0.17	+0.3
2,364,992	-		DZA65_RS11155	0.17	-0.1
2,365,106	+		DZA65_RS11155	0.49	-1.1
2,365,184	+		DZA65_RS11155	0.71	-1.0
2,365,196	+		DZA65_RS11155	0.75	+1.1
2,365,196	+		DZA65_RS11155	0.75	-0.9
2,365,197	-		DZA65_RS11155	0.75	-0.6
2,365,197	-		DZA65_RS11155	0.75	-2.2
2,365,197	-		DZA65_RS11155	0.75	-0.3
2,365,197	-		DZA65_RS11155	0.75	-0.2
2,365,251	-				+0.7
2,365,264	-				-1.2
2,365,264	-				-0.4
2,365,268	+				+0.3
2,365,269	-				-1.0
2,365,269	-				-0.9
2,365,269	-				-0.6
2,365,269	-				+0.1
2,365,269	-				-0.4
2,365,269	-				+0.6
2,365,269	-				-0.9
2,365,269	-				+1.7
2,365,315	+				-0.3
2,365,315	+				+0.9
2,365,316	-				-0.4
2,365,340	+				-0.4
2,365,341	-				-0.3
2,365,341	-				-0.6
2,365,343	+				-0.9
2,365,352	+				+0.1
2,365,353	-				-0.6
2,365,353	-				-1.3
2,365,354	+				+0.6
2,365,354	+				+1.4
2,365,355	-				+3.1
2,365,355	-				-2.4
2,365,355	-				-0.8
2,365,355	-				+0.3
2,365,378	+				-0.0
2,365,378	+				+0.4
2,365,379	-				-1.1
2,365,379	-				-0.9
2,365,379	-				-1.0
2,365,441	+				-0.2
2,365,441	+				+0.7
2,365,493	+				+0.3
2,365,493	+				-1.6