Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,323,724	-		DZA65_RS10980	0.80	-1.0
2,323,898	-				-0.3
2,323,900	+				-0.9
2,323,901	-				-0.7
2,323,901	-				-1.0
2,323,908	+				-0.3
2,323,908	+				+0.9
2,323,909	-				+0.9
2,323,909	-				-0.1
2,323,909	-				-0.5
2,323,909	-				-0.1
2,323,977	+				+0.5
2,324,147	+		DZA65_RS10985	0.31	-0.3
2,324,147	+		DZA65_RS10985	0.31	+0.4
2,324,148	-		DZA65_RS10985	0.31	+0.3
2,324,148	-		DZA65_RS10985	0.31	-0.5
2,324,148	-		DZA65_RS10985	0.31	-0.9
2,324,154	-		DZA65_RS10985	0.32	+0.1
2,324,154	-		DZA65_RS10985	0.32	-0.3
2,324,154	-		DZA65_RS10985	0.32	+0.4
2,324,154	-		DZA65_RS10985	0.32	+0.8
2,324,165	+		DZA65_RS10985	0.34	-0.3
2,324,165	+		DZA65_RS10985	0.34	+0.0
2,324,165	+		DZA65_RS10985	0.34	+1.0
2,324,165	+		DZA65_RS10985	0.34	-0.7
2,324,165	+		DZA65_RS10985	0.34	+0.3
2,324,165	+		DZA65_RS10985	0.34	-1.2
2,324,166	-		DZA65_RS10985	0.34	-1.1
2,324,166	-		DZA65_RS10985	0.34	-0.1
2,324,166	-		DZA65_RS10985	0.34	+0.9
2,324,166	-		DZA65_RS10985	0.34	-1.5
2,324,166	-		DZA65_RS10985	0.34	+1.7
2,324,166	-		DZA65_RS10985	0.34	-0.1
2,324,166	-		DZA65_RS10985	0.34	+0.1
2,324,166	-		DZA65_RS10985	0.34	-0.2
2,324,166	-		DZA65_RS10985	0.34	-0.3
2,324,461	+		DZA65_RS10985	0.84	-0.2
2,324,461	+		DZA65_RS10985	0.84	+0.1
2,324,462	-		DZA65_RS10985	0.84	+1.2
2,324,462	-		DZA65_RS10985	0.84	-1.1
2,324,657	-		DZA65_RS10990	0.10	+0.3
2,324,657	-		DZA65_RS10990	0.10	-0.9
2,324,661	-		DZA65_RS10990	0.11	+0.6
2,324,661	-		DZA65_RS10990	0.11	+0.5
2,324,666	+		DZA65_RS10990	0.11	+1.6
2,324,666	+		DZA65_RS10990	0.11	+0.3
2,324,666	+		DZA65_RS10990	0.11	-1.4
2,324,666	+		DZA65_RS10990	0.11	-0.4
2,324,770	-		DZA65_RS10990	0.25	-2.2
2,324,770	-		DZA65_RS10990	0.25	-1.2
2,324,953	-		DZA65_RS10990	0.49	+0.1
2,324,953	-		DZA65_RS10990	0.49	+1.0
2,324,953	-		DZA65_RS10990	0.49	-1.9
2,324,953	-		DZA65_RS10990	0.49	+0.1
2,325,054	+		DZA65_RS10990	0.62	-0.3
2,325,054	+		DZA65_RS10990	0.62	+0.4
2,325,054	+		DZA65_RS10990	0.62	+0.3
2,325,054	+		DZA65_RS10990	0.62	-1.4
2,325,055	-		DZA65_RS10990	0.62	-0.0
2,325,055	-		DZA65_RS10990	0.62	+0.2
2,325,138	+		DZA65_RS10990	0.73	-1.4
2,325,138	+		DZA65_RS10990	0.73	+1.0
2,325,138	+		DZA65_RS10990	0.73	-0.2
2,325,155	+		DZA65_RS10990	0.75	+0.6
2,325,156	-		DZA65_RS10990	0.75	+0.5
2,325,156	-		DZA65_RS10990	0.75	+0.8
2,325,156	-		DZA65_RS10990	0.75	-1.0
2,325,246	-		DZA65_RS10990	0.87	-0.9
2,325,255	-		DZA65_RS10990	0.88	+0.4
2,325,309	+				+1.1
2,325,310	-				+0.7
2,325,341	+				+1.0
2,325,418	+				-0.2
2,325,419	-				+0.4
2,325,433	-				-1.2
2,325,502	+				+0.8
2,325,502	+				-0.5
2,325,503	-				+0.8
2,325,503	-				+0.3
2,325,503	-				+0.7
2,325,503	-				-1.7
2,325,503	-				-0.2
2,325,506	+				-0.8
2,325,536	-				-0.4
2,325,536	-				-1.7
2,325,536	-				+0.1
2,325,545	+				-0.8
2,325,545	+				-0.1
2,325,546	-				+1.0
2,325,546	-				+0.7
2,325,575	-				-0.1
2,325,600	+				-1.2
2,325,600	+				+0.0
2,325,600	+				+0.4
2,325,600	+				-0.9
2,325,601	-				-0.1
2,325,601	-				+0.1
2,325,601	-				+0.7
2,325,601	-				-2.9
2,325,638	+				+0.1
2,325,649	+				+0.5
2,325,657	-				+0.1
2,325,720	+				+0.5
2,325,732	+				-0.5
2,325,733	-				+0.1
2,325,766	-		DZA65_RS10995	0.13	-0.1
2,325,937	+		DZA65_RS10995	0.29	+0.5
2,325,937	+		DZA65_RS10995	0.29	+0.4
2,325,937	+		DZA65_RS10995	0.29	+2.1
2,325,937	+		DZA65_RS10995	0.29	+2.3
2,325,937	+		DZA65_RS10995	0.29	-1.1
2,325,937	+		DZA65_RS10995	0.29	-1.0
2,325,937	+		DZA65_RS10995	0.29	+0.0
2,325,937	+		DZA65_RS10995	0.29	+1.2
2,325,937	+		DZA65_RS10995	0.29	-0.1
2,325,937	+		DZA65_RS10995	0.29	-0.9
2,325,937	+		DZA65_RS10995	0.29	-0.2
2,325,938	-		DZA65_RS10995	0.29	-0.3
2,325,938	-		DZA65_RS10995	0.29	-0.4
2,325,938	-		DZA65_RS10995	0.29	+0.3
2,325,938	-		DZA65_RS10995	0.29	-0.7
2,325,938	-		DZA65_RS10995	0.29	+0.7
2,326,168	+		DZA65_RS10995	0.51	+0.8
2,326,169	-		DZA65_RS10995	0.51	-0.6
2,326,170	+		DZA65_RS10995	0.51	+1.3
2,326,170	+		DZA65_RS10995	0.51	+0.0
2,326,170	+		DZA65_RS10995	0.51	-1.9
2,326,170	+		DZA65_RS10995	0.51	-0.1
2,326,170	+		DZA65_RS10995	0.51	-0.6
2,326,171	-		DZA65_RS10995	0.52	+1.6
2,326,171	-		DZA65_RS10995	0.52	-0.5
2,326,171	-		DZA65_RS10995	0.52	+1.0
2,326,171	-		DZA65_RS10995	0.52	-0.2
2,326,171	-		DZA65_RS10995	0.52	+0.5
2,326,281	+		DZA65_RS10995	0.62	+0.2
2,326,281	+				+0.7
2,326,282	-		DZA65_RS10995	0.62	-0.5
2,326,282	-		DZA65_RS10995	0.62	-1.4
2,326,282	-		DZA65_RS10995	0.62	-0.9
2,326,299	+		DZA65_RS10995	0.64	+0.3
2,326,299	+		DZA65_RS10995	0.64	-0.0
2,326,300	-		DZA65_RS10995	0.64	+1.0
2,326,300	-		DZA65_RS10995	0.64	+0.4
2,326,312	+		DZA65_RS10995	0.65	+1.5
2,326,312	+		DZA65_RS10995	0.65	-0.6
2,326,312	+		DZA65_RS10995	0.65	+1.9
2,326,313	-		DZA65_RS10995	0.65	+0.3
2,326,313	-		DZA65_RS10995	0.65	-0.6
2,326,313	-		DZA65_RS10995	0.65	+0.7
2,326,320	+		DZA65_RS10995	0.66	-0.0
2,326,321	-		DZA65_RS10995	0.66	+0.6