Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10785

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,281,269	-				-0.6
2,281,312	-				-1.2
2,281,372	+				-1.9
2,281,417	+				+0.2
2,281,476	-				-0.1
2,281,476	-				+0.3
2,281,486	+				-3.0
2,281,486	+				+0.2
2,281,486	+				-1.2
2,281,486	+				-1.7
2,281,490	+				+0.3
2,281,490	+				+0.2
2,281,491	-				-0.3
2,281,491	-				+0.6
2,281,491	-				+0.6
2,281,491	-				-1.4
2,281,539	+				-0.6
2,281,540	-				-0.8
2,281,548	+				+0.4
2,281,571	+				+1.7
2,281,571	+				+0.2
2,281,571	+				+0.7
2,281,572	-				-2.4
2,281,572	-				-0.8
2,281,629	+				-0.8
2,281,693	+		DZA65_RS10780	0.15	-0.2
2,281,909	+		DZA65_RS10780	0.54	+0.1
2,281,909	+		DZA65_RS10780	0.54	+1.0
2,281,910	-		DZA65_RS10780	0.54	-0.9
2,281,935	+		DZA65_RS10780	0.59	-0.8
2,281,996	+		DZA65_RS10780	0.70	+0.6
2,282,085	-		DZA65_RS10780	0.86	-2.2
2,282,085	-		DZA65_RS10780	0.86	-1.1
2,282,085	-		DZA65_RS10780	0.86	+0.6
2,282,134	+				-0.5
2,282,135	-				-0.2
2,282,153	+				-0.2
2,282,153	+				-0.7
2,282,153	+				+0.2
2,282,153	+				-0.8
2,282,154	-				+0.1
2,282,154	-				+2.7
2,282,154	-				-0.7
2,282,159	+				+0.8
2,282,159	+				-0.5
2,282,160	-				+1.5
2,282,221	+				+0.7
2,282,405	+				+0.2
2,282,405	+				-0.1
2,282,405	+				+1.7
2,282,406	-				+1.2
2,282,574	+		DZA65_RS10785	0.17	-0.1
2,282,574	+		DZA65_RS10785	0.17	-1.2
2,282,598	-		DZA65_RS10785	0.18	+0.9
2,282,760	-		DZA65_RS10785	0.27	-0.3
2,282,760	-		DZA65_RS10785	0.27	-0.1
2,282,760	-		DZA65_RS10785	0.27	-0.6
2,282,783	+		DZA65_RS10785	0.28	-0.3
2,282,784	-		DZA65_RS10785	0.28	+0.2
2,282,784	-		DZA65_RS10785	0.28	+0.7
2,282,784	-		DZA65_RS10785	0.28	+0.6
2,282,784	-		DZA65_RS10785	0.28	-1.0
2,282,784	-		DZA65_RS10785	0.28	+0.2
2,282,784	-		DZA65_RS10785	0.28	+0.2
2,282,785	+		DZA65_RS10785	0.28	-0.4
2,282,785	+		DZA65_RS10785	0.28	-0.6
2,282,786	-		DZA65_RS10785	0.28	+0.9
2,282,786	-		DZA65_RS10785	0.28	-0.2
2,282,786	-		DZA65_RS10785	0.28	+0.1
2,282,786	-		DZA65_RS10785	0.28	+0.3
2,282,786	-		DZA65_RS10785	0.28	+0.3
2,282,786	-		DZA65_RS10785	0.28	-3.7
2,282,906	+		DZA65_RS10785	0.34	-1.1
2,282,907	-		DZA65_RS10785	0.34	+1.0
2,282,990	+				-0.3
2,283,080	+		DZA65_RS10785	0.43	+1.3
2,283,080	+		DZA65_RS10785	0.43	-1.4
2,283,081	-		DZA65_RS10785	0.43	+0.5
2,283,081	-		DZA65_RS10785	0.43	-0.3
2,283,081	-		DZA65_RS10785	0.43	-0.1
2,283,081	-		DZA65_RS10785	0.43	-0.1
2,283,081	-		DZA65_RS10785	0.43	-0.2
2,283,082	+		DZA65_RS10785	0.43	+0.6
2,283,082	+		DZA65_RS10785	0.43	+0.2
2,283,083	-		DZA65_RS10785	0.43	-0.3
2,283,083	-		DZA65_RS10785	0.43	+1.3
2,283,083	-		DZA65_RS10785	0.43	+0.6
2,283,088	+		DZA65_RS10785	0.44	-0.3
2,283,204	-		DZA65_RS10785	0.50	-0.8
2,283,223	+		DZA65_RS10785	0.51	+0.6
2,283,223	+		DZA65_RS10785	0.51	+0.4
2,283,223	+		DZA65_RS10785	0.51	+1.7
2,283,224	-		DZA65_RS10785	0.51	-0.4
2,283,224	-		DZA65_RS10785	0.51	+0.3
2,283,285	+		DZA65_RS10785	0.54	-0.4
2,283,397	+		DZA65_RS10785	0.60	-0.3
2,283,398	-		DZA65_RS10785	0.60	+1.5
2,283,422	-		DZA65_RS10785	0.61	-0.6
2,283,452	+		DZA65_RS10785	0.63	-0.3
2,283,452	+		DZA65_RS10785	0.63	-1.3
2,283,473	+		DZA65_RS10785	0.64	+0.3
2,283,474	-		DZA65_RS10785	0.64	-0.7
2,283,474	-		DZA65_RS10785	0.64	-1.5
2,283,474	-		DZA65_RS10785	0.64	+1.2
2,283,508	+		DZA65_RS10785	0.66	-0.9
2,283,509	-		DZA65_RS10785	0.66	+0.2
2,283,765	+		DZA65_RS10785	0.79	-0.1
2,283,766	-				-0.2
2,283,884	+		DZA65_RS10785	0.85	-0.3
2,283,884	+		DZA65_RS10785	0.85	+0.0
2,283,885	-				-0.8
2,283,886	+		DZA65_RS10785	0.85	-0.8
2,283,886	+				+0.6
2,283,886	+		DZA65_RS10785	0.85	+0.7
2,283,887	-		DZA65_RS10785	0.85	+0.2
2,283,887	-		DZA65_RS10785	0.85	-1.3
2,283,887	-		DZA65_RS10785	0.85	-0.2
2,283,887	-		DZA65_RS10785	0.85	+0.2
2,283,887	-		DZA65_RS10785	0.85	-0.4
2,284,051	+				-1.8
2,284,052	-				+1.6
2,284,075	+				+0.6
2,284,076	-				+0.2
2,284,078	+				+0.5
2,284,079	-				-0.6
2,284,220	+		DZA65_RS10790	0.11	-0.4
2,284,220	+		DZA65_RS10790	0.11	-0.2
2,284,260	+		DZA65_RS10790	0.21	+0.2
2,284,261	-		DZA65_RS10790	0.21	-0.8
2,284,281	-		DZA65_RS10790	0.26	-1.0
2,284,302	+		DZA65_RS10790	0.32	-1.8
2,284,374	+		DZA65_RS10790	0.50	-0.7
2,284,460	-		DZA65_RS10790	0.71	+0.3
2,284,460	-		DZA65_RS10790	0.71	-0.5
2,284,570	+				-0.4
2,284,577	-				+0.3
2,284,577	-				+0.2
2,284,577	-				-0.1
2,284,577	-				-0.1
2,284,683	-				-0.7
2,284,683	-				-0.0
2,284,732	-		DZA65_RS10795	0.14	+0.7
2,284,939	-		DZA65_RS10795	0.40	+0.9
2,284,939	-		DZA65_RS10795	0.40	-0.2
2,284,981	-		DZA65_RS10795	0.45	-0.4
2,285,021	+		DZA65_RS10795	0.50	-0.8
2,285,021	+		DZA65_RS10795	0.50	-0.4
2,285,021	+		DZA65_RS10795	0.50	+0.6
2,285,022	-		DZA65_RS10795	0.50	-0.6
2,285,022	-		DZA65_RS10795	0.50	-1.7
2,285,039	+		DZA65_RS10795	0.52	-0.0
2,285,040	-		DZA65_RS10795	0.52	-1.2
2,285,040	-		DZA65_RS10795	0.52	-0.4
2,285,040	-		DZA65_RS10795	0.52	-1.3
2,285,154	+		DZA65_RS10795	0.66	-2.0