Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,249,555	+		DZA65_RS10595	0.82	-0.7
2,249,555	+		DZA65_RS10595	0.82	+0.0
2,249,556	-		DZA65_RS10595	0.82	+0.2
2,249,556	-		DZA65_RS10595	0.82	-1.6
2,249,556	-		DZA65_RS10595	0.82	-0.4
2,249,556	-		DZA65_RS10595	0.82	+0.2
2,249,556	-		DZA65_RS10595	0.82	+0.8
2,249,556	-		DZA65_RS10595	0.82	+1.0
2,249,558	+		DZA65_RS10595	0.82	-1.2
2,249,558	+		DZA65_RS10595	0.82	+1.2
2,249,558	+		DZA65_RS10595	0.82	-0.7
2,249,558	+		DZA65_RS10595	0.82	+0.3
2,249,558	+		DZA65_RS10595	0.82	-1.6
2,249,558	+		DZA65_RS10595	0.82	-0.5
2,249,558	+		DZA65_RS10595	0.82	-0.2
2,249,559	-		DZA65_RS10595	0.82	-0.2
2,249,559	-		DZA65_RS10595	0.82	-0.7
2,249,559	-		DZA65_RS10595	0.82	-0.1
2,249,559	-		DZA65_RS10595	0.82	+0.3
2,249,598	+		DZA65_RS10595	0.84	-0.1
2,249,598	+		DZA65_RS10595	0.84	-0.3
2,249,599	-		DZA65_RS10595	0.84	-1.3
2,249,635	-		DZA65_RS10595	0.86	+0.0
2,249,640	+		DZA65_RS10595	0.86	-0.8
2,249,640	+		DZA65_RS10595	0.86	+0.4
2,249,640	+		DZA65_RS10595	0.86	+0.1
2,249,640	+		DZA65_RS10595	0.86	-0.4
2,249,640	+		DZA65_RS10595	0.86	-0.4
2,249,640	+		DZA65_RS10595	0.86	-1.3
2,249,641	-		DZA65_RS10595	0.86	+1.2
2,249,652	+		DZA65_RS10595	0.87	+0.3
2,249,652	+		DZA65_RS10595	0.87	+0.6
2,249,652	+		DZA65_RS10595	0.87	-1.1
2,249,652	+		DZA65_RS10595	0.87	+0.3
2,249,652	+		DZA65_RS10595	0.87	-1.4
2,249,653	-		DZA65_RS10595	0.87	-0.4
2,249,653	-		DZA65_RS10595	0.87	+0.8
2,249,653	-		DZA65_RS10595	0.87	+0.8
2,249,653	-		DZA65_RS10595	0.87	+1.1
2,249,653	-		DZA65_RS10595	0.87	-0.2
2,249,653	-		DZA65_RS10595	0.87	-0.2
2,249,654	+		DZA65_RS10595	0.87	+0.9
2,249,654	+		DZA65_RS10595	0.87	-0.7
2,249,654	+		DZA65_RS10595	0.87	-0.2
2,249,654	+		DZA65_RS10595	0.87	-0.3
2,249,654	+		DZA65_RS10595	0.87	+0.5
2,249,655	-		DZA65_RS10595	0.87	+0.3
2,249,655	-		DZA65_RS10595	0.87	-0.1
2,249,655	-		DZA65_RS10595	0.87	-1.1
2,249,655	-		DZA65_RS10595	0.87	-0.7
2,249,655	-		DZA65_RS10595	0.87	+0.5
2,249,655	-		DZA65_RS10595	0.87	+0.3
2,249,655	-		DZA65_RS10595	0.87	-2.4
2,249,662	-		DZA65_RS10595	0.87	-0.3
2,249,662	-		DZA65_RS10595	0.87	-0.4
2,249,662	-		DZA65_RS10595	0.87	-0.4
2,249,662	-		DZA65_RS10595	0.87	+0.1
2,249,805	-				+1.1
2,249,861	+				+0.2
2,249,861	+				+1.2
2,249,861	+				-0.7
2,249,861	+				-0.1
2,249,862	-				+1.2
2,249,919	+				+1.8
2,249,920	-				+0.5
2,249,955	-				-0.5
2,250,078	+				+0.2
2,250,078	+				+0.1
2,250,079	-				-1.4
2,250,112	+				-0.1
2,250,112	+				+0.0
2,250,113	-				+3.5
2,250,221	+				-0.8
2,250,222	-				+0.2
2,250,244	+				+0.5
2,250,245	-				-0.1
2,250,329	+				-0.4
2,250,365	+				-1.1
2,250,366	-				+0.2
2,250,377	-				-0.2
2,250,387	+				+2.2
2,250,388	-				+0.0
2,250,434	+				-0.1
2,250,453	+				-2.8
2,250,453	+				+0.6
2,250,453	+				+1.1
2,250,453	+				-0.4
2,250,454	-				+0.4
2,250,454	-				+0.8
2,250,454	-				+0.3
2,250,457	+				+0.6
2,250,457	+				-0.5
2,250,457	+				+0.5
2,250,458	-				-0.3
2,250,458	-				-1.2
2,250,458	-				-1.8
2,250,472	-				-1.4
2,250,472	-				-0.0
2,250,531	+		DZA65_RS10600	0.34	+0.4
2,250,531	+		DZA65_RS10600	0.34	+1.8
2,250,531	+		DZA65_RS10600	0.34	+0.6
2,250,532	-		DZA65_RS10600	0.35	-0.1
2,250,591	+		DZA65_RS10600	0.60	+0.8
2,250,592	-		DZA65_RS10600	0.61	+0.4
2,250,592	-		DZA65_RS10600	0.61	+0.8
2,250,592	-		DZA65_RS10600	0.61	-1.2
2,250,592	-		DZA65_RS10600	0.61	-0.0
2,250,654	+		DZA65_RS10600	0.87	+0.7
2,250,654	+		DZA65_RS10600	0.87	-1.0
2,250,675	+				-0.8
2,250,675	+				+0.8
2,250,675	+				-1.2
2,250,676	-				+0.7
2,250,676	-				+0.2
2,250,708	-				-0.1
2,250,708	-				-0.4
2,250,782	+				-0.8
2,250,783	-				+0.2
2,250,903	+		DZA65_RS10605	0.15	+1.2
2,250,966	+		DZA65_RS10605	0.32	-0.8
2,251,032	+		DZA65_RS10605	0.49	-1.6
2,251,151	-		DZA65_RS10605	0.81	-2.6
2,251,204	+				-1.1
2,251,204	+				-0.3
2,251,205	-				+0.1
2,251,222	+				-0.8
2,251,222	+				+0.6
2,251,222	+				-0.3
2,251,223	-				-1.0
2,251,223	-				-1.8
2,251,246	+				-2.6
2,251,247	-				-1.8
2,251,281	+				+1.0
2,251,281	+				-0.4
2,251,281	+				+0.0
2,251,281	+				-0.8
2,251,281	+				-1.4
2,251,282	-				-0.5
2,251,282	-				+0.4
2,251,306	+				-0.7
2,251,306	+				-0.0
2,251,412	+		DZA65_RS10610	0.21	-0.1
2,251,412	+		DZA65_RS10610	0.21	-0.1
2,251,413	-		DZA65_RS10610	0.21	+0.7
2,251,413	-		DZA65_RS10610	0.21	+0.5
2,251,452	+		DZA65_RS10610	0.25	-0.6
2,251,453	-		DZA65_RS10610	0.25	+1.2
2,251,456	-		DZA65_RS10610	0.25	-0.6
2,251,619	+		DZA65_RS10610	0.44	-0.7
2,251,620	-		DZA65_RS10610	0.44	-1.2
2,251,628	+		DZA65_RS10610	0.45	-0.8
2,251,628	+		DZA65_RS10610	0.45	-0.5
2,251,682	+		DZA65_RS10610	0.51	+0.2