Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,237,632	+		DZA65_RS10550	0.51	+0.3
2,237,735	+		DZA65_RS10550	0.58	-0.1
2,237,788	-		DZA65_RS10550	0.62	+0.2
2,238,069	+		DZA65_RS10550	0.82	+0.4
2,238,082	-		DZA65_RS10550	0.83	-1.8
2,238,279	+				+0.8
2,238,340	+				-3.4
2,238,340	+				-0.3
2,238,380	-				-0.6
2,238,383	+				+0.8
2,238,383	+				-0.6
2,238,383	+				+1.3
2,238,383	+				+0.1
2,238,383	+				+1.5
2,238,384	-				+0.7
2,238,443	+				-0.1
2,238,493	-				-0.8
2,238,604	-		DZA65_RS10555	0.13	-2.1
2,238,888	+		DZA65_RS10555	0.42	-1.0
2,239,102	+		DZA65_RS10555	0.63	-0.6
2,239,240	+		DZA65_RS10555	0.77	-0.8
2,239,376	-				-0.8
2,239,447	+				+2.3
2,239,490	-				-1.0
2,239,561	-				-1.3
2,239,654	+				-1.1
2,239,688	-				-0.0
2,239,701	+				-2.6
2,239,701	+				+0.4
2,239,701	+				+0.8
2,239,807	+				+1.0
2,239,808	-				+0.6
2,239,808	-				-1.2
2,239,833	+				-0.8
2,239,838	-				-0.8
2,239,865	-				-1.4
2,239,902	+				-0.1
2,239,903	-				-0.8
2,239,937	+				+0.4
2,239,951	+		DZA65_RS10560	0.10	+0.6
2,239,951	+		DZA65_RS10560	0.10	-0.3
2,239,951	+		DZA65_RS10560	0.10	-0.6
2,239,951	+		DZA65_RS10560	0.10	+1.1
2,239,951	+				+1.0
2,239,951	+		DZA65_RS10560	0.10	-0.1
2,239,952	-		DZA65_RS10560	0.11	-0.6
2,239,952	-		DZA65_RS10560	0.11	+1.3
2,239,952	-		DZA65_RS10560	0.11	-2.1
2,239,952	-		DZA65_RS10560	0.11	-1.2
2,239,952	-		DZA65_RS10560	0.11	+0.2
2,239,952	-		DZA65_RS10560	0.11	-1.6
2,240,016	+		DZA65_RS10560	0.25	-0.2
2,240,229	+		DZA65_RS10560	0.75	+0.9
2,240,292	+		DZA65_RS10560	0.89	-0.6
2,240,330	+				+0.2
2,240,330	+				-1.4
2,240,331	-				+0.5
2,240,336	-				-1.4
2,240,336	-				+0.9
2,240,366	+				-0.4
2,240,367	-				-0.2
2,240,369	+				+0.4
2,240,370	-				+0.2
2,240,370	-				+0.5
2,240,381	-				+0.4
2,240,390	+				+0.5
2,240,409	+				+0.6