Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09605

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,020,117	+		DZA65_RS09600	0.78	-0.1
2,020,117	+		DZA65_RS09600	0.78	-0.1
2,020,147	+		DZA65_RS09600	0.80	-0.7
2,020,160	-		DZA65_RS09600	0.81	+0.1
2,020,212	+		DZA65_RS09600	0.86	-0.6
2,020,212	+		DZA65_RS09600	0.86	-0.4
2,020,213	-		DZA65_RS09600	0.86	+0.2
2,020,213	-		DZA65_RS09600	0.86	-0.8
2,020,213	-		DZA65_RS09600	0.86	+0.7
2,020,382	-				+0.1
2,020,382	-				+0.4
2,020,382	-				-0.1
2,020,401	-				-0.7
2,020,403	+				+0.6
2,020,403	+				+0.8
2,020,404	-				+0.5
2,020,421	+				-0.1
2,020,421	+				+0.1
2,020,421	+				+0.9
2,020,422	-				+0.3
2,020,422	-				-0.9
2,020,422	-				-0.0
2,020,427	-				+0.6
2,020,427	-				+0.1
2,020,541	-				+0.2
2,020,541	-				+1.2
2,020,623	-				-0.2
2,020,643	+				+1.0
2,020,679	+				+0.2
2,020,715	+				+0.5
2,020,961	+				-0.8
2,021,021	-				+1.6
2,021,075	-				-0.0
2,021,120	+				+1.6
2,021,144	-				-0.2
2,021,295	+		DZA65_RS09605	0.18	+0.6
2,021,337	+		DZA65_RS09605	0.22	+1.2
2,021,359	-		DZA65_RS09605	0.24	-1.1
2,021,364	-		DZA65_RS09605	0.24	+0.1
2,021,402	+		DZA65_RS09605	0.28	+0.2
2,021,403	-		DZA65_RS09605	0.28	-0.4
2,021,418	+		DZA65_RS09605	0.30	-0.3
2,021,446	+		DZA65_RS09605	0.32	-0.6
2,021,447	-		DZA65_RS09605	0.33	+2.2
2,021,556	+		DZA65_RS09605	0.43	-0.5
2,021,557	-		DZA65_RS09605	0.43	+0.6
2,021,557	-		DZA65_RS09605	0.43	-1.5
2,021,565	+		DZA65_RS09605	0.44	-1.6
2,021,565	+		DZA65_RS09605	0.44	-1.0
2,021,566	-		DZA65_RS09605	0.44	-0.7
2,021,628	+		DZA65_RS09605	0.50	+0.2
2,021,628	+		DZA65_RS09605	0.50	+0.2
2,021,703	+		DZA65_RS09605	0.58	-0.2
2,021,704	-		DZA65_RS09605	0.58	-1.1
2,021,726	+		DZA65_RS09605	0.60	+0.4
2,021,952	+		DZA65_RS09605	0.82	-0.4
2,021,967	-		DZA65_RS09605	0.83	-0.2
2,022,134	+				+0.5
2,022,135	-				+0.5
2,022,136	+				+0.5
2,022,136	+				-0.4
2,022,147	-				-0.9
2,022,256	+				+0.7
2,022,275	+				+0.4
2,022,275	+				-0.7
2,022,275	+				+1.2
2,022,287	+				+0.1
2,022,295	+				-0.3
2,022,295	+				+0.2
2,022,295	+				-0.3
2,022,348	-				-0.3
2,022,348	-				-0.5
2,022,351	-				+0.4
2,022,352	+				+0.5
2,022,398	+				-0.3
2,022,398	+				+0.2
2,022,398	+				-2.6
2,022,398	+				+1.2
2,022,398	+				-0.8
2,022,450	+				-0.4
2,022,451	-		DZA65_RS09610	0.10	-1.8
2,022,522	+		DZA65_RS09610	0.14	+0.5
2,022,522	+		DZA65_RS09610	0.14	-0.1
2,022,542	+		DZA65_RS09610	0.15	-1.6
2,022,593	+		DZA65_RS09610	0.18	+0.5
2,022,621	+		DZA65_RS09610	0.20	+0.4
2,022,621	+		DZA65_RS09610	0.20	+0.5
2,022,622	-		DZA65_RS09610	0.20	-1.9
2,022,638	+		DZA65_RS09610	0.21	-0.3
2,022,762	+		DZA65_RS09610	0.28	+0.6
2,022,762	+		DZA65_RS09610	0.28	-1.4
2,022,763	-		DZA65_RS09610	0.28	+0.2
2,022,763	-		DZA65_RS09610	0.28	+0.4
2,022,829	+		DZA65_RS09610	0.32	+0.2
2,022,829	+		DZA65_RS09610	0.32	+0.5
2,022,829	+		DZA65_RS09610	0.32	-0.9
2,022,830	-		DZA65_RS09610	0.32	+0.2
2,022,830	-		DZA65_RS09610	0.32	+0.1
2,022,832	+		DZA65_RS09610	0.32	-0.3
2,022,832	+		DZA65_RS09610	0.32	-0.4
2,022,832	+		DZA65_RS09610	0.32	+1.1
2,022,832	+		DZA65_RS09610	0.32	+0.7
2,022,833	-		DZA65_RS09610	0.32	-0.2
2,023,044	-		DZA65_RS09610	0.44	-1.1
2,023,044	-		DZA65_RS09610	0.44	+0.4
2,023,074	+		DZA65_RS09610	0.46	+0.7
2,023,075	-		DZA65_RS09610	0.46	+0.5
2,023,075	-		DZA65_RS09610	0.46	-1.6
2,023,075	-		DZA65_RS09610	0.46	-0.0
2,023,075	-		DZA65_RS09610	0.46	+1.4
2,023,075	-		DZA65_RS09610	0.46	+0.9
2,023,075	-		DZA65_RS09610	0.46	+0.6
2,023,089	+		DZA65_RS09610	0.46	+0.2
2,023,089	+		DZA65_RS09610	0.46	-0.4
2,023,089	+		DZA65_RS09610	0.46	+0.3
2,023,090	-		DZA65_RS09610	0.47	-1.1
2,023,103	+		DZA65_RS09610	0.47	-0.2
2,023,103	+		DZA65_RS09610	0.47	-2.1
2,023,103	+		DZA65_RS09610	0.47	+0.0
2,023,104	-		DZA65_RS09610	0.47	+0.1
2,023,104	-		DZA65_RS09610	0.47	+0.6