Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09015

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,897,845	+				-0.6
1,897,845	+				+0.8
1,897,845	+				+1.2
1,897,845	+				+1.3
1,897,845	+				-0.1
1,897,846	-				-0.6
1,897,846	-				-0.6
1,897,846	-				-2.1
1,897,846	-				+0.8
1,897,846	-				-0.2
1,897,846	-				-0.2
1,897,846	-				-0.5
1,897,846	-				+0.0
1,897,926	+		DZA65_RS09005	0.16	-0.6
1,897,926	+		DZA65_RS09005	0.16	-0.7
1,897,926	+		DZA65_RS09005	0.16	-1.8
1,897,926	+		DZA65_RS09005	0.16	-0.4
1,897,926	+		DZA65_RS09005	0.16	+0.2
1,897,926	+		DZA65_RS09005	0.16	+0.7
1,897,927	-		DZA65_RS09005	0.16	+1.8
1,897,927	-		DZA65_RS09005	0.16	+0.6
1,897,927	-		DZA65_RS09005	0.16	-1.7
1,897,939	+		DZA65_RS09005	0.18	-0.5
1,898,177	-		DZA65_RS09005	0.65	+0.9
1,898,186	+		DZA65_RS09005	0.66	-1.6
1,898,187	-		DZA65_RS09005	0.66	+0.4
1,898,187	-		DZA65_RS09005	0.66	-1.1
1,898,187	-		DZA65_RS09005	0.66	-0.8
1,898,187	-		DZA65_RS09005	0.66	-0.0
1,898,230	-		DZA65_RS09005	0.75	+0.6
1,898,292	+		DZA65_RS09005	0.87	-1.3
1,898,292	+		DZA65_RS09005	0.87	-0.0
1,898,292	+		DZA65_RS09005	0.87	+0.7
1,898,296	-		DZA65_RS09005	0.88	-0.2
1,898,332	-				-0.3
1,898,356	+				-1.8
1,898,356	+				-0.2
1,898,356	+				-0.3
1,898,364	+				-0.3
1,898,364	+				+1.2
1,898,385	+				+0.2
1,898,386	-				-0.3
1,898,386	-				-0.2
1,898,743	+		DZA65_RS09010	0.78	-0.2
1,898,743	+		DZA65_RS09010	0.78	+0.9
1,898,743	+		DZA65_RS09010	0.78	+0.0
1,898,744	-		DZA65_RS09010	0.78	-1.0
1,898,744	-		DZA65_RS09010	0.78	-0.5
1,898,744	-		DZA65_RS09010	0.78	-0.4
1,898,744	-		DZA65_RS09010	0.78	-0.6
1,898,780	+		DZA65_RS09010	0.86	+0.0
1,898,781	-		DZA65_RS09010	0.86	-2.9
1,898,849	+				-1.9
1,898,917	-		DZA65_RS09015	0.30	-0.7
1,899,104	+				-0.9
1,899,104	+				-0.1
1,899,104	+				-0.8
1,899,104	+				+1.0
1,899,105	-				-1.0
1,899,105	-				+1.5
1,899,144	+		DZA65_RS09020	0.11	-0.2
1,899,144	+		DZA65_RS09020	0.11	-0.4
1,899,145	-		DZA65_RS09020	0.12	+0.2
1,899,145	-		DZA65_RS09020	0.12	-0.8
1,899,145	-		DZA65_RS09020	0.12	-0.7
1,899,202	+		DZA65_RS09020	0.24	-0.5
1,899,260	+		DZA65_RS09020	0.37	-2.2
1,899,261	-				+0.2
1,899,261	-		DZA65_RS09020	0.37	-0.5
1,899,261	-		DZA65_RS09020	0.37	-0.6
1,899,325	+				+0.2
1,899,325	+		DZA65_RS09020	0.52	-0.1
1,899,326	-		DZA65_RS09020	0.52	-1.8
1,899,326	-		DZA65_RS09020	0.52	-0.8
1,899,438	+		DZA65_RS09020	0.77	-0.3
1,899,439	-		DZA65_RS09020	0.77	+0.7
1,899,541	-				+0.2
1,899,575	-				-0.1
1,899,578	+				-2.6
1,899,578	+				+0.5
1,899,634	-				-0.4
1,899,648	+				+0.8
1,899,648	+				+0.4
1,899,649	-				-0.5
1,899,649	-				+0.7
1,899,666	-				+1.0
1,899,666	-				+0.1
1,899,745	-				+0.8
1,899,745	-				+0.2
1,899,745	-				-0.6
1,899,752	+				-2.2
1,899,758	+				-0.3
1,899,759	-				-0.2
1,899,766	+				-0.6
1,899,766	+				-0.3
1,899,766	+				-0.1
1,899,781	-				-0.5
1,899,787	-				-1.1
1,899,787	-				+0.5
1,899,787	-				+1.1
1,899,798	+				+0.5
1,899,799	-				+0.7
1,899,799	-				-0.1
1,899,800	+				-0.2
1,899,800	+				+2.1
1,899,800	+				+0.2
1,899,800	+				+1.2
1,899,801	-				-1.3
1,899,801	-				-2.1
1,899,801	-				+0.2
1,899,801	-				+0.2
1,899,801	-				-0.6
1,899,801	-				-0.4
1,899,801	-				+1.9
1,899,801	-				-0.8
1,899,801	-				-0.6
1,899,801	-				-2.8
1,899,882	+				+0.1
1,899,882	+				+0.6
1,899,882	+				-0.8
1,899,882	+				-0.8
1,899,882	+				-0.1
1,899,883	-				+0.4
1,899,892	+		DZA65_RS09025	0.10	+1.1
1,899,892	+		DZA65_RS09025	0.10	-0.9
1,899,893	-		DZA65_RS09025	0.10	-0.2
1,899,939	+		DZA65_RS09025	0.15	-0.3