Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,896,864	+				-0.2
1,896,865	-				-0.4
1,896,867	+				+1.9
1,896,868	-				+0.0
1,896,868	-				-2.6
1,896,897	-				+0.2
1,896,908	+				+0.2
1,896,908	+				-2.0
1,896,908	+				-2.6
1,896,908	+				+0.9
1,896,909	-				+0.2
1,896,909	-				-1.6
1,896,909	-				-1.6
1,896,912	+				+1.2
1,896,912	+				+0.0
1,896,912	+				-1.6
1,896,912	+				-0.1
1,896,913	-				-0.5
1,896,913	-				-0.8
1,896,913	-				-0.3
1,896,913	-				+0.2
1,896,913	-				-1.1
1,897,071	-		DZA65_RS09000	0.25	+0.7
1,897,073	+				+0.2
1,897,073	+		DZA65_RS09000	0.25	-0.4
1,897,073	+		DZA65_RS09000	0.25	-1.0
1,897,073	+		DZA65_RS09000	0.25	+0.5
1,897,073	+		DZA65_RS09000	0.25	-0.6
1,897,074	-		DZA65_RS09000	0.25	-2.2
1,897,265	+		DZA65_RS09000	0.44	-0.2
1,897,310	+		DZA65_RS09000	0.49	-1.5
1,897,395	-		DZA65_RS09000	0.58	-0.8
1,897,395	-		DZA65_RS09000	0.58	-0.2
1,897,395	-		DZA65_RS09000	0.58	-1.2
1,897,548	+		DZA65_RS09000	0.73	-0.7
1,897,579	-		DZA65_RS09000	0.76	-1.5
1,897,722	-				-0.2
1,897,784	+				-1.8
1,897,802	+				+0.5
1,897,845	+				-0.6
1,897,845	+				+0.8
1,897,845	+				+1.2
1,897,845	+				+1.3
1,897,845	+				-0.1
1,897,846	-				-0.6
1,897,846	-				-0.6
1,897,846	-				-2.1
1,897,846	-				+0.8
1,897,846	-				-0.2
1,897,846	-				-0.2
1,897,846	-				-0.5
1,897,846	-				+0.0
1,897,926	+		DZA65_RS09005	0.16	-0.6
1,897,926	+		DZA65_RS09005	0.16	-0.7
1,897,926	+		DZA65_RS09005	0.16	-1.8
1,897,926	+		DZA65_RS09005	0.16	-0.4
1,897,926	+		DZA65_RS09005	0.16	+0.2
1,897,926	+		DZA65_RS09005	0.16	+0.7
1,897,927	-		DZA65_RS09005	0.16	+1.8
1,897,927	-		DZA65_RS09005	0.16	+0.6
1,897,927	-		DZA65_RS09005	0.16	-1.7
1,897,939	+		DZA65_RS09005	0.18	-0.5
1,898,177	-		DZA65_RS09005	0.65	+0.9
1,898,186	+		DZA65_RS09005	0.66	-1.6
1,898,187	-		DZA65_RS09005	0.66	+0.4
1,898,187	-		DZA65_RS09005	0.66	-1.1
1,898,187	-		DZA65_RS09005	0.66	-0.8
1,898,187	-		DZA65_RS09005	0.66	-0.0
1,898,230	-		DZA65_RS09005	0.75	+0.6
1,898,292	+		DZA65_RS09005	0.87	-1.3
1,898,292	+		DZA65_RS09005	0.87	-0.0
1,898,292	+		DZA65_RS09005	0.87	+0.7
1,898,296	-		DZA65_RS09005	0.88	-0.2
1,898,332	-				-0.3
1,898,356	+				-1.8
1,898,356	+				-0.2
1,898,356	+				-0.3
1,898,364	+				-0.3
1,898,364	+				+1.2
1,898,385	+				+0.2
1,898,386	-				-0.3
1,898,386	-				-0.2
1,898,743	+		DZA65_RS09010	0.78	-0.2
1,898,743	+		DZA65_RS09010	0.78	+0.9
1,898,743	+		DZA65_RS09010	0.78	+0.0
1,898,744	-		DZA65_RS09010	0.78	-1.0
1,898,744	-		DZA65_RS09010	0.78	-0.5
1,898,744	-		DZA65_RS09010	0.78	-0.4
1,898,744	-		DZA65_RS09010	0.78	-0.6
1,898,780	+		DZA65_RS09010	0.86	+0.0
1,898,781	-		DZA65_RS09010	0.86	-2.9
1,898,849	+				-1.9
1,898,917	-		DZA65_RS09015	0.30	-0.7
1,899,104	+				-0.9
1,899,104	+				-0.1
1,899,104	+				-0.8
1,899,104	+				+1.0
1,899,105	-				-1.0
1,899,105	-				+1.5
1,899,144	+		DZA65_RS09020	0.11	-0.2
1,899,144	+		DZA65_RS09020	0.11	-0.4
1,899,145	-		DZA65_RS09020	0.12	+0.2
1,899,145	-		DZA65_RS09020	0.12	-0.8
1,899,145	-		DZA65_RS09020	0.12	-0.7
1,899,202	+		DZA65_RS09020	0.24	-0.5
1,899,260	+		DZA65_RS09020	0.37	-2.2
1,899,261	-				+0.2
1,899,261	-		DZA65_RS09020	0.37	-0.5
1,899,261	-		DZA65_RS09020	0.37	-0.6
1,899,325	+				+0.2
1,899,325	+		DZA65_RS09020	0.52	-0.1
1,899,326	-		DZA65_RS09020	0.52	-1.8
1,899,326	-		DZA65_RS09020	0.52	-0.8