Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08990

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,892,504	-		DZA65_RS08980	0.83	-0.3
1,892,593	+				-0.8
1,892,593	+				+0.2
1,892,594	-				-0.5
1,892,597	+				-0.1
1,892,597	+				-0.3
1,892,598	-				-0.3
1,892,598	-				+0.7
1,892,743	+				+0.7
1,892,743	+				+0.1
1,892,744	-				+0.4
1,892,807	+				-0.9
1,892,807	+				+1.1
1,892,818	+				-1.8
1,892,819	-				-0.6
1,892,857	+				+0.4
1,892,857	+				-0.2
1,892,905	-				-0.8
1,892,908	+				-0.6
1,892,908	+				-1.3
1,892,908	+				+0.2
1,892,908	+				+0.5
1,892,909	-				-0.5
1,892,909	-				-0.1
1,892,914	+				+0.4
1,892,914	+				+0.0
1,892,915	-				+0.8
1,892,915	-				+0.2
1,892,915	-				-1.3
1,892,917	+				+0.6
1,892,923	+				-0.5
1,893,037	+				+0.2
1,893,037	+				-2.3
1,893,038	-				+1.1
1,893,060	+				-0.4
1,893,061	-				-0.0
1,893,080	+				+0.8
1,893,081	-				-0.8
1,893,118	+				-0.3
1,893,118	+				+0.5
1,893,118	+				+0.6
1,893,118	+				-1.1
1,893,118	+				+0.0
1,893,118	+				-0.1
1,893,118	+				-0.3
1,893,119	-				-0.7
1,893,119	-				-0.8
1,893,119	-				-0.9
1,893,119	-				+0.7
1,893,119	-				-1.0
1,893,119	-				-1.2
1,893,138	+				-0.9
1,893,195	-				+1.2
1,893,262	+				-0.6
1,893,262	+				+1.1
1,893,266	-				-1.8
1,893,266	-				-0.6
1,893,266	-				+0.2
1,893,266	-				-0.2
1,893,266	-				-1.5
1,893,355	+				+0.2
1,893,356	-				+0.2
1,893,356	-				+0.3
1,893,356	-				+0.1
1,893,356	-				-0.2
1,893,356	-				-0.1
1,893,361	+				+0.4
1,893,361	+				+0.2
1,893,362	-				-1.5
1,893,362	-				+0.7
1,893,362	-				+0.0
1,893,362	-				+0.1
1,893,362	-				-0.5
1,893,362	-				-0.3
1,893,417	+				-1.0
1,893,418	-				+0.3
1,893,487	+				+1.0
1,893,575	+		DZA65_RS08990	0.11	-0.1
1,893,575	+		DZA65_RS08990	0.11	-0.5
1,893,575	+		DZA65_RS08990	0.11	+0.8
1,893,576	-		DZA65_RS08990	0.11	+0.2
1,893,618	-		DZA65_RS08990	0.13	+0.2
1,893,618	-		DZA65_RS08990	0.13	-0.4
1,893,618	-		DZA65_RS08990	0.13	-0.4
1,893,618	-		DZA65_RS08990	0.13	+0.1
1,893,629	+		DZA65_RS08990	0.14	+0.6
1,893,629	+		DZA65_RS08990	0.14	-0.5
1,893,629	+		DZA65_RS08990	0.14	-0.5
1,893,629	+		DZA65_RS08990	0.14	-1.5
1,893,630	-		DZA65_RS08990	0.14	+1.1
1,893,630	-		DZA65_RS08990	0.14	-0.2
1,893,630	-		DZA65_RS08990	0.14	-0.3
1,893,630	-		DZA65_RS08990	0.14	-0.3
1,893,630	-		DZA65_RS08990	0.14	-0.0
1,893,632	+		DZA65_RS08990	0.14	+0.5
1,893,633	-		DZA65_RS08990	0.14	-0.6
1,893,638	+		DZA65_RS08990	0.14	-0.0
1,893,638	+		DZA65_RS08990	0.14	-0.7
1,893,638	+		DZA65_RS08990	0.14	-0.2
1,893,638	+		DZA65_RS08990	0.14	+0.5
1,893,639	-		DZA65_RS08990	0.14	-1.2
1,893,639	-		DZA65_RS08990	0.14	+1.6
1,893,639	-		DZA65_RS08990	0.14	+0.7
1,893,641	+		DZA65_RS08990	0.14	-0.0
1,893,641	+		DZA65_RS08990	0.14	+1.1
1,893,641	+		DZA65_RS08990	0.14	-1.6
1,893,641	+		DZA65_RS08990	0.14	+0.8
1,893,642	-		DZA65_RS08990	0.14	-0.8
1,893,642	-		DZA65_RS08990	0.14	-1.3
1,893,656	+		DZA65_RS08990	0.15	+0.2
1,893,656	+		DZA65_RS08990	0.15	+0.2
1,893,656	+		DZA65_RS08990	0.15	+0.2
1,893,656	+		DZA65_RS08990	0.15	+1.0
1,893,656	+		DZA65_RS08990	0.15	-0.0
1,893,656	+		DZA65_RS08990	0.15	+1.1
1,893,656	+		DZA65_RS08990	0.15	+0.4
1,893,656	+		DZA65_RS08990	0.15	+0.8
1,893,656	+		DZA65_RS08990	0.15	+1.8
1,893,656	+		DZA65_RS08990	0.15	-0.5
1,893,656	+				-1.3
1,893,656	+		DZA65_RS08990	0.15	+0.8
1,893,657	-		DZA65_RS08990	0.15	-0.2
1,893,657	-		DZA65_RS08990	0.15	-1.7
1,893,657	-		DZA65_RS08990	0.15	-0.4
1,893,657	-		DZA65_RS08990	0.15	-0.6
1,893,657	-		DZA65_RS08990	0.15	-0.6
1,893,657	-		DZA65_RS08990	0.15	-0.9
1,893,657	-		DZA65_RS08990	0.15	-1.1
1,893,657	-		DZA65_RS08990	0.15	-1.8
1,893,657	-		DZA65_RS08990	0.15	-0.3
1,893,657	-		DZA65_RS08990	0.15	-2.3
1,893,791	+		DZA65_RS08990	0.22	-0.8
1,893,791	+		DZA65_RS08990	0.22	+0.4
1,893,791	+		DZA65_RS08990	0.22	-0.2
1,893,791	+		DZA65_RS08990	0.22	-1.7
1,893,791	+		DZA65_RS08990	0.22	+0.8
1,893,791	+		DZA65_RS08990	0.22	-0.5
1,893,792	-		DZA65_RS08990	0.22	+0.2
1,893,792	-		DZA65_RS08990	0.22	-0.2
1,893,792	-		DZA65_RS08990	0.22	-0.6
1,893,815	+		DZA65_RS08990	0.23	-1.9
1,893,815	+		DZA65_RS08990	0.23	-0.5
1,893,816	-		DZA65_RS08990	0.23	-1.1
1,893,896	+		DZA65_RS08990	0.27	-0.1
1,893,959	-		DZA65_RS08990	0.30	-0.9
1,894,054	+		DZA65_RS08990	0.35	-0.2
1,894,054	+		DZA65_RS08990	0.35	-2.3
1,894,054	+		DZA65_RS08990	0.35	+0.4
1,894,055	-		DZA65_RS08990	0.35	-1.6
1,894,055	-		DZA65_RS08990	0.35	-0.2
1,894,055	-		DZA65_RS08990	0.35	-0.0
1,894,055	-		DZA65_RS08990	0.35	+0.6
1,894,055	-		DZA65_RS08990	0.35	-0.4
1,894,055	-		DZA65_RS08990	0.35	+0.8
1,894,085	+		DZA65_RS08990	0.36	-0.7
1,894,100	+				+1.2
1,894,100	+		DZA65_RS08990	0.37	+0.2
1,894,101	-		DZA65_RS08990	0.37	-1.1
1,894,101	-		DZA65_RS08990	0.37	+0.6
1,894,101	-		DZA65_RS08990	0.37	-1.3
1,894,189	+		DZA65_RS08990	0.41	+0.1
1,894,189	+		DZA65_RS08990	0.41	-0.3
1,894,189	+		DZA65_RS08990	0.41	-1.8
1,894,189	+		DZA65_RS08990	0.41	+0.1
1,894,189	+		DZA65_RS08990	0.41	-0.5
1,894,190	-		DZA65_RS08990	0.41	-0.8
1,894,190	-		DZA65_RS08990	0.41	-1.3
1,894,190	-		DZA65_RS08990	0.41	-1.9
1,894,190	-		DZA65_RS08990	0.41	+0.4
1,894,190	-		DZA65_RS08990	0.41	+0.7
1,894,280	+		DZA65_RS08990	0.46	-0.1
1,894,281	-		DZA65_RS08990	0.46	-0.9
1,894,337	+		DZA65_RS08990	0.49	-0.5
1,894,337	+		DZA65_RS08990	0.49	-0.4
1,894,337	+		DZA65_RS08990	0.49	-2.6
1,894,338	-		DZA65_RS08990	0.49	-0.7
1,894,406	+		DZA65_RS08990	0.52	-2.3
1,894,407	-				+0.8
1,894,407	-		DZA65_RS08990	0.52	-1.9
1,894,407	-		DZA65_RS08990	0.52	-0.7
1,894,526	+		DZA65_RS08990	0.58	+0.2
1,894,526	+		DZA65_RS08990	0.58	-2.8
1,894,526	+		DZA65_RS08990	0.58	-1.1
1,894,526	+		DZA65_RS08990	0.58	+0.5
1,894,526	+		DZA65_RS08990	0.58	+0.4
1,894,526	+		DZA65_RS08990	0.58	+0.2
1,894,526	+		DZA65_RS08990	0.58	+0.5
1,894,526	+		DZA65_RS08990	0.58	+1.2
1,894,526	+		DZA65_RS08990	0.58	+0.2
1,894,526	+		DZA65_RS08990	0.58	+0.2
1,894,526	+		DZA65_RS08990	0.58	+0.7
1,894,526	+		DZA65_RS08990	0.58	+0.1
1,894,526	+		DZA65_RS08990	0.58	+0.2
1,894,526	+		DZA65_RS08990	0.58	-0.6
1,894,526	+		DZA65_RS08990	0.58	-0.3
1,894,526	+		DZA65_RS08990	0.58	+0.5
1,894,526	+		DZA65_RS08990	0.58	-1.8
1,894,527	-		DZA65_RS08990	0.58	-0.5
1,894,527	-		DZA65_RS08990	0.58	-0.6
1,894,527	-		DZA65_RS08990	0.58	-0.2
1,894,527	-		DZA65_RS08990	0.58	+1.8
1,894,527	-		DZA65_RS08990	0.58	+0.1
1,894,527	-		DZA65_RS08990	0.58	-0.2
1,894,527	-		DZA65_RS08990	0.58	-1.3
1,894,527	-		DZA65_RS08990	0.58	-0.8
1,894,527	-		DZA65_RS08990	0.58	-0.2
1,894,527	-		DZA65_RS08990	0.58	+1.1
1,894,527	-		DZA65_RS08990	0.58	-0.3
1,894,527	-				-0.8
1,894,527	-		DZA65_RS08990	0.58	+0.8
1,894,527	-		DZA65_RS08990	0.58	+0.9
1,894,527	-		DZA65_RS08990	0.58	+0.4
1,894,590	+		DZA65_RS08990	0.61	-0.1
1,894,590	+		DZA65_RS08990	0.61	-0.6
1,894,591	-		DZA65_RS08990	0.61	+1.2
1,894,748	+		DZA65_RS08990	0.69	+0.5
1,894,748	+		DZA65_RS08990	0.69	+0.2
1,894,773	+		DZA65_RS08990	0.70	+0.6
1,894,774	-		DZA65_RS08990	0.70	+0.9
1,894,774	-		DZA65_RS08990	0.70	-1.3
1,894,774	-		DZA65_RS08990	0.70	+0.1
1,894,779	-		DZA65_RS08990	0.71	-0.1
1,894,779	-		DZA65_RS08990	0.71	-0.0
1,895,012	+		DZA65_RS08990	0.82	-1.2
1,895,087	+		DZA65_RS08990	0.86	+0.2
1,895,087	+		DZA65_RS08990	0.86	+0.8
1,895,088	-		DZA65_RS08990	0.86	-0.2
1,895,088	-		DZA65_RS08990	0.86	-2.3
1,895,088	-		DZA65_RS08990	0.86	-0.8
1,895,088	-		DZA65_RS08990	0.86	+0.8
1,895,088	-		DZA65_RS08990	0.86	+0.2
1,895,088	-		DZA65_RS08990	0.86	+0.2
1,895,353	+				-0.1
1,895,354	-				-0.2
1,895,366	+				-0.4
1,895,372	+				-1.3
1,895,372	+				+1.6
1,895,372	+				+0.0
1,895,373	-				-0.0
1,895,578	-		DZA65_RS08995	0.22	-0.2
1,895,605	-		DZA65_RS08995	0.24	+1.1
1,895,642	-		DZA65_RS08995	0.28	+0.1
1,895,675	+		DZA65_RS08995	0.32	-0.5
1,895,675	+		DZA65_RS08995	0.32	+0.2
1,895,675	+		DZA65_RS08995	0.32	+0.4
1,895,675	+		DZA65_RS08995	0.32	-1.0
1,895,675	+		DZA65_RS08995	0.32	+0.5
1,895,675	+		DZA65_RS08995	0.32	-0.3
1,895,676	-		DZA65_RS08995	0.32	+1.3
1,895,676	-		DZA65_RS08995	0.32	+0.1
1,895,676	-		DZA65_RS08995	0.32	+0.0
1,895,676	-				-1.3
1,895,729	-		DZA65_RS08995	0.37	-0.1
1,895,886	-		DZA65_RS08995	0.54	+1.5
1,896,004	+		DZA65_RS08995	0.66	-0.5
1,896,004	+		DZA65_RS08995	0.66	+0.6
1,896,004	+		DZA65_RS08995	0.66	-0.6
1,896,004	+		DZA65_RS08995	0.66	+0.1
1,896,004	+		DZA65_RS08995	0.66	+0.7
1,896,004	+		DZA65_RS08995	0.66	+0.5
1,896,004	+				+0.2
1,896,004	+		DZA65_RS08995	0.66	-0.6
1,896,005	-		DZA65_RS08995	0.66	-0.4
1,896,005	-		DZA65_RS08995	0.66	-0.1
1,896,005	-		DZA65_RS08995	0.66	-0.1
1,896,005	-		DZA65_RS08995	0.66	+0.6
1,896,005	-		DZA65_RS08995	0.66	+0.2
1,896,005	-		DZA65_RS08995	0.66	-0.1
1,896,005	-		DZA65_RS08995	0.66	-1.0
1,896,005	-		DZA65_RS08995	0.66	+0.8
1,896,005	-		DZA65_RS08995	0.66	+0.3
1,896,009	+		DZA65_RS08995	0.66	+0.4
1,896,010	-		DZA65_RS08995	0.67	-0.2
1,896,139	-		DZA65_RS08995	0.80	+0.6
1,896,330	+				+1.1
1,896,331	-				-0.2
1,896,334	+				+1.2
1,896,334	+				+0.7
1,896,334	+				-0.5
1,896,334	+				+0.4
1,896,335	-				-0.4
1,896,335	-				+1.2
1,896,368	-				-2.6