Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08680

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,835,969	-		DZA65_RS08670	0.75	-1.5
1,835,969	-		DZA65_RS08670	0.75	-0.6
1,835,969	-		DZA65_RS08670	0.75	-1.5
1,836,121	+				-0.7
1,836,121	+				-0.6
1,836,122	-				-1.3
1,836,122	-				+0.9
1,836,122	-				-1.1
1,836,165	-				-0.5
1,836,212	+				-0.2
1,836,314	+		DZA65_RS08675	0.15	-0.3
1,836,315	-		DZA65_RS08675	0.15	+1.1
1,836,315	-		DZA65_RS08675	0.15	+0.3
1,836,675	-		DZA65_RS08675	0.67	+0.3
1,836,675	-		DZA65_RS08675	0.67	+0.1
1,836,743	+		DZA65_RS08675	0.76	+0.1
1,836,744	-		DZA65_RS08675	0.77	-0.5
1,836,790	+		DZA65_RS08675	0.83	+0.0
1,836,790	+		DZA65_RS08675	0.83	-0.3
1,836,790	+		DZA65_RS08675	0.83	-0.3
1,836,791	-		DZA65_RS08675	0.83	+0.7
1,836,826	-		DZA65_RS08675	0.88	-1.1
1,836,862	+				-0.3
1,836,863	-				-1.5
1,836,863	-				+1.3
1,836,988	+		DZA65_RS08680	0.22	+1.1
1,836,988	+		DZA65_RS08680	0.22	+0.5
1,836,988	+		DZA65_RS08680	0.22	+0.0
1,836,988	+		DZA65_RS08680	0.22	+0.0
1,836,988	+		DZA65_RS08680	0.22	+0.7
1,836,988	+		DZA65_RS08680	0.22	+0.8
1,836,988	+		DZA65_RS08680	0.22	-1.0
1,836,988	+		DZA65_RS08680	0.22	+0.4
1,836,989	-		DZA65_RS08680	0.22	-0.5
1,836,989	-		DZA65_RS08680	0.22	-0.4
1,837,025	+		DZA65_RS08680	0.31	+1.1
1,837,059	+		DZA65_RS08680	0.39	-0.7
1,837,059	+		DZA65_RS08680	0.39	+0.9
1,837,060	-		DZA65_RS08680	0.39	-0.5
1,837,060	-		DZA65_RS08680	0.39	+1.1
1,837,060	-		DZA65_RS08680	0.39	-0.3
1,837,060	-		DZA65_RS08680	0.39	-2.3
1,837,102	+		DZA65_RS08680	0.49	+0.7
1,837,103	-		DZA65_RS08680	0.50	-0.3
1,837,103	-		DZA65_RS08680	0.50	-0.5
1,837,103	-		DZA65_RS08680	0.50	+0.5
1,837,103	-		DZA65_RS08680	0.50	-1.2
1,837,104	+		DZA65_RS08680	0.50	+0.6
1,837,104	+		DZA65_RS08680	0.50	+0.1
1,837,104	+		DZA65_RS08680	0.50	-0.7
1,837,105	-		DZA65_RS08680	0.50	+0.7
1,837,105	-		DZA65_RS08680	0.50	+0.6
1,837,257	+		DZA65_RS08680	0.87	+0.6
1,837,258	-		DZA65_RS08680	0.87	+0.7
1,837,258	-		DZA65_RS08680	0.87	+0.7
1,837,265	+		DZA65_RS08680	0.88	-0.2
1,837,306	+				+0.0
1,837,389	+				+0.3
1,837,403	-				+0.1
1,837,403	-				-1.2
1,837,438	+				+0.6
1,837,439	-				+0.8
1,837,465	+				-0.2
1,837,466	-				-3.2
1,837,473	-				-0.3
1,837,473	-				-0.6
1,837,473	-				+0.9
1,837,479	+				+0.3
1,837,479	+				+0.6
1,837,480	-				-2.7
1,837,480	-				-0.6
1,837,480	-				-1.7
1,837,480	-				-0.5
1,837,480	-				+1.3
1,837,480	-				-0.6
1,837,480	-				+1.0
1,837,486	+				+0.5
1,837,486	+				+0.3
1,837,486	+				-0.5
1,837,486	+				-1.7
1,837,487	-				+1.0
1,837,487	-				-0.4
1,837,487	-				-0.7
1,837,487	-				+0.8
1,837,487	-				-1.1
1,837,493	+				+0.9
1,837,493	+				+1.1
1,837,493	+				+0.1
1,837,493	+				+0.8
1,837,493	+				+0.5
1,837,493	+				-0.3
1,837,493	+				-0.5
1,837,494	-				-1.3
1,837,494	-				+1.8
1,837,494	-				+0.1
1,837,494	-				-0.6
1,837,494	-				-0.1
1,837,494	-				+1.5
1,837,500	+				-0.2
1,837,500	+				+1.0
1,837,500	+				+0.3
1,837,500	+				+0.1
1,837,500	+				-0.5
1,837,500	+				-1.2
1,837,500	+				+2.3
1,837,501	-				+0.3
1,837,501	-				-0.7
1,837,501	-				-0.9
1,837,501	-				-1.8
1,837,507	+				+0.1
1,837,507	+				+0.8
1,837,507	+				+0.9
1,837,507	+				+0.8
1,837,508	-				-3.1
1,837,508	-				+0.7
1,837,508	-				-1.0
1,837,508	-				+0.7
1,837,508	-				+0.7
1,837,508	-				+0.0
1,837,580	+				-0.6
1,837,580	+				+0.0
1,837,580	+				+0.3
1,837,633	+				+0.3
1,837,634	-				-0.1
1,837,693	-				-0.1
1,837,693	-				-0.7
1,837,724	-				-0.6
1,837,956	+		DZA65_RS08685	0.15	+0.3
1,837,957	-		DZA65_RS08685	0.15	+0.1
1,837,957	-		DZA65_RS08685	0.15	-0.6
1,837,959	+		DZA65_RS08685	0.15	+0.6
1,837,960	-		DZA65_RS08685	0.15	+0.4
1,838,068	+		DZA65_RS08685	0.20	+1.1
1,838,069	-		DZA65_RS08685	0.20	+0.2
1,838,069	-		DZA65_RS08685	0.20	+0.1
1,838,069	-		DZA65_RS08685	0.20	-0.8
1,838,069	-		DZA65_RS08685	0.20	+0.6