Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08635

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,827,631	+				+1.2
1,827,631	+				+0.9
1,827,631	+				-0.1
1,827,811	+		DZA65_RS08630	0.30	-0.7
1,827,811	+		DZA65_RS08630	0.30	+0.3
1,827,811	+		DZA65_RS08630	0.30	-1.3
1,827,811	+		DZA65_RS08630	0.30	+0.1
1,827,811	+		DZA65_RS08630	0.30	+0.3
1,827,811	+		DZA65_RS08630	0.30	-0.7
1,827,812	-		DZA65_RS08630	0.30	+0.4
1,827,812	-		DZA65_RS08630	0.30	-0.1
1,827,812	-		DZA65_RS08630	0.30	-0.2
1,827,812	-		DZA65_RS08630	0.30	+1.9
1,827,812	-		DZA65_RS08630	0.30	+1.0
1,827,812	-		DZA65_RS08630	0.30	+0.0
1,827,812	-		DZA65_RS08630	0.30	+0.3
1,827,812	-		DZA65_RS08630	0.30	+0.0
1,827,812	-		DZA65_RS08630	0.30	+0.7
1,827,812	-		DZA65_RS08630	0.30	-0.2
1,827,812	-		DZA65_RS08630	0.30	+0.2
1,827,812	-		DZA65_RS08630	0.30	-0.3
1,827,812	-		DZA65_RS08630	0.30	-2.1
1,827,836	+		DZA65_RS08630	0.33	+0.1
1,828,003	+		DZA65_RS08630	0.52	+0.3
1,828,003	+		DZA65_RS08630	0.52	+0.5
1,828,003	+		DZA65_RS08630	0.52	-0.3
1,828,003	+		DZA65_RS08630	0.52	+0.0
1,828,004	-		DZA65_RS08630	0.53	-0.7
1,828,004	-		DZA65_RS08630	0.53	+1.1
1,828,063	+		DZA65_RS08630	0.60	-0.2
1,828,215	+		DZA65_RS08630	0.78	+0.7
1,828,237	-		DZA65_RS08630	0.80	-2.7
1,828,242	-		DZA65_RS08630	0.81	-0.6
1,828,309	+		DZA65_RS08630	0.89	-0.1
1,828,309	+		DZA65_RS08630	0.89	-0.7
1,828,310	-		DZA65_RS08630	0.89	-0.1
1,828,310	-		DZA65_RS08630	0.89	+0.3
1,828,310	-		DZA65_RS08630	0.89	-0.5
1,828,310	-		DZA65_RS08630	0.89	-0.1
1,828,310	-		DZA65_RS08630	0.89	+0.3
1,828,402	+				+0.0
1,828,410	-				+0.9
1,828,442	-				-0.3
1,828,473	+				+0.1
1,828,504	-				-0.2
1,828,509	+				+0.3
1,828,509	+				+0.1
1,828,509	+				-0.4
1,828,509	+				-1.7
1,828,509	+				-2.1
1,828,510	-				-0.1
1,828,510	-				-0.1
1,828,510	-				-0.4
1,828,510	-				+1.2
1,828,515	+				-1.5
1,828,515	+				-1.3
1,828,515	+				+0.7
1,828,515	+				+1.3
1,828,515	+				+0.1
1,828,515	+				-0.6
1,828,515	+				+0.4
1,828,515	+				-0.4
1,828,515	+				-2.3
1,828,515	+				-1.9
1,828,515	+				+0.4
1,828,515	+				+1.3
1,828,516	-				-3.1
1,828,516	-				+0.0
1,828,516	-				-1.7
1,828,516	-				-0.2
1,828,516	-				+0.9
1,828,602	+				+0.3
1,828,602	+				-0.1
1,828,603	-				-1.1
1,828,603	-				-0.1
1,828,603	-				-0.5
1,828,608	-				-0.6
1,828,608	-				+1.3
1,828,749	+		DZA65_RS08635	0.21	-1.3
1,828,801	+		DZA65_RS08635	0.26	-1.1
1,828,801	+				-0.3
1,828,918	+		DZA65_RS08635	0.36	-0.3
1,828,919	-		DZA65_RS08635	0.36	-0.7
1,828,919	-		DZA65_RS08635	0.36	-0.4
1,828,919	-		DZA65_RS08635	0.36	+0.5
1,828,927	+		DZA65_RS08635	0.37	+0.0
1,828,927	+		DZA65_RS08635	0.37	+0.5
1,828,927	+		DZA65_RS08635	0.37	+1.6
1,828,928	-		DZA65_RS08635	0.37	+0.5
1,828,955	+		DZA65_RS08635	0.40	+0.2
1,828,955	+		DZA65_RS08635	0.40	+0.7
1,828,955	+		DZA65_RS08635	0.40	+0.3
1,828,955	+		DZA65_RS08635	0.40	+0.4
1,829,020	+		DZA65_RS08635	0.45	+0.7
1,829,042	-		DZA65_RS08635	0.47	+0.4
1,829,113	+		DZA65_RS08635	0.54	+0.3
1,829,221	+		DZA65_RS08635	0.63	-0.1
1,829,222	-		DZA65_RS08635	0.63	-1.7
1,829,222	-		DZA65_RS08635	0.63	+1.4
1,829,222	-		DZA65_RS08635	0.63	-0.1
1,829,222	-		DZA65_RS08635	0.63	+0.5
1,829,222	-		DZA65_RS08635	0.63	+0.2
1,829,351	-		DZA65_RS08635	0.75	-2.1
1,829,351	-		DZA65_RS08635	0.75	+1.2
1,829,352	+		DZA65_RS08635	0.75	-0.3
1,829,353	-		DZA65_RS08635	0.75	+0.9
1,829,353	-		DZA65_RS08635	0.75	+0.4
1,829,353	-		DZA65_RS08635	0.75	+0.7
1,829,358	+		DZA65_RS08635	0.76	+0.2
1,829,443	-		DZA65_RS08635	0.83	-0.1
1,829,503	+		DZA65_RS08635	0.89	+0.5
1,829,504	-		DZA65_RS08635	0.89	-0.6
1,829,504	-		DZA65_RS08635	0.89	+0.2
1,829,504	-				-1.3
1,829,504	-		DZA65_RS08635	0.89	-1.2
1,829,504	-		DZA65_RS08635	0.89	-0.9
1,829,530	+				+1.9
1,829,639	+				+0.7
1,829,639	+				+1.5
1,829,639	+				-0.6
1,829,639	+				+0.9
1,829,639	+				-0.5
1,829,639	+				-1.3
1,829,640	-				-1.0
1,829,651	+				+1.3
1,829,651	+				-1.2
1,829,652	-				-0.9
1,829,652	-				-0.7
1,829,856	+		DZA65_RS08640	0.16	-0.3
1,829,856	+		DZA65_RS08640	0.16	+0.2
1,829,857	-		DZA65_RS08640	0.16	+0.6
1,829,857	-		DZA65_RS08640	0.16	-1.0
1,829,978	+		DZA65_RS08640	0.25	-1.1
1,830,050	+		DZA65_RS08640	0.31	+0.9
1,830,051	-		DZA65_RS08640	0.31	-1.8
1,830,236	+		DZA65_RS08640	0.45	-0.7
1,830,237	-		DZA65_RS08640	0.45	+0.3
1,830,489	+		DZA65_RS08640	0.64	-0.1
1,830,490	-		DZA65_RS08640	0.64	-0.3
1,830,627	+		DZA65_RS08640	0.75	-0.6
1,830,628	-		DZA65_RS08640	0.75	+0.7