Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08015

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,672,006	+		DZA65_RS08010	0.64	+0.6
1,672,006	+		DZA65_RS08010	0.64	-0.1
1,672,150	+		DZA65_RS08010	0.76	+0.1
1,672,192	+		DZA65_RS08010	0.79	-0.9
1,672,192	+				+0.3
1,672,193	-		DZA65_RS08010	0.80	-2.0
1,672,243	+				+0.7
1,672,487	+				+0.2
1,672,522	+				-1.9
1,672,523	-				+0.1
1,672,523	-				-0.5
1,672,523	-				-0.3
1,672,523	-				-1.1
1,672,523	-				+0.3
1,672,539	+				+0.3
1,672,540	-				-0.2
1,672,540	-				+0.4
1,672,552	+				-1.0
1,672,553	-				+0.7
1,672,561	+				+0.3
1,672,562	-				-0.8
1,672,562	-				+0.4
1,672,591	-				+0.3
1,672,683	-				+0.4
1,672,686	-				-1.1
1,672,714	+				+0.4
1,672,715	-				-0.1
1,672,736	-				-2.9
1,672,854	+				-0.5
1,672,855	-				+0.7
1,672,855	-				-0.8
1,672,856	+				-0.0
1,672,856	+				-0.5
1,672,856	+				-0.4
1,672,856	+				+0.6
1,672,856	+				+0.3
1,672,856	+				-1.4
1,672,856	+				+2.1
1,672,856	+				+0.1
1,672,856	+				-0.2
1,672,856	+				+1.3
1,672,856	+				+1.9
1,672,856	+				-0.7
1,672,856	+				+1.7
1,672,856	+				-0.8
1,672,856	+				-0.3
1,672,856	+				-0.1
1,672,856	+				-0.7
1,672,857	-				-0.1
1,672,857	-				-0.2
1,672,857	-				+0.3
1,672,857	-				-0.4
1,672,857	-				+0.5
1,672,857	-				-0.1
1,672,857	-				-0.3
1,672,857	-				+0.9
1,672,857	-				-0.7
1,672,857	-				-0.2
1,672,857	-				-1.0
1,672,857	-				+0.8
1,672,857	-				-0.7
1,672,857	-				-0.6
1,672,857	-				-0.7
1,672,857	-				-3.3
1,672,858	+				+0.3
1,672,858	+				-0.7
1,672,858	+				+0.3
1,672,858	+				+0.4
1,672,858	+				-0.9
1,672,858	+				+0.3
1,672,858	+				-0.0
1,672,858	+				+0.0
1,672,858	+				-3.3
1,672,858	+				+0.4
1,672,859	-				+1.3
1,672,859	-				+0.9
1,672,859	-				+0.1
1,672,859	-				-0.1
1,672,859	-				-1.1
1,672,859	-				+0.3
1,672,859	-				-2.0
1,672,859	-				-0.0
1,672,878	+				+0.3
1,672,879	-				-0.7
1,672,898	-				+0.2
1,672,920	-				+0.1
1,672,954	+				-0.3
1,672,954	+				+0.3
1,672,957	+				-0.7
1,672,957	+				+0.2
1,672,966	+				-0.1
1,672,966	+				+0.7
1,672,967	-				-0.7
1,672,967	-				-0.7
1,672,967	-				-1.6
1,672,977	-				-0.6
1,673,095	+		DZA65_RS08015	0.12	-0.7
1,673,095	+		DZA65_RS08015	0.12	-0.1
1,673,096	-		DZA65_RS08015	0.12	+1.4
1,673,096	-		DZA65_RS08015	0.12	+0.3
1,673,096	-		DZA65_RS08015	0.12	+0.7
1,673,096	-		DZA65_RS08015	0.12	+2.1
1,673,096	-		DZA65_RS08015	0.12	+0.8
1,673,102	+		DZA65_RS08015	0.13	-0.3
1,673,103	-		DZA65_RS08015	0.13	+0.2
1,673,103	-		DZA65_RS08015	0.13	+0.3
1,673,195	-		DZA65_RS08015	0.23	-0.6
1,673,195	-		DZA65_RS08015	0.23	-0.8
1,673,227	+		DZA65_RS08015	0.27	+0.8
1,673,227	+		DZA65_RS08015	0.27	+0.0
1,673,228	-		DZA65_RS08015	0.27	+0.3
1,673,228	-		DZA65_RS08015	0.27	+0.8
1,673,403	+		DZA65_RS08015	0.48	-1.0
1,673,403	+		DZA65_RS08015	0.48	+1.5
1,673,404	-		DZA65_RS08015	0.48	-0.2
1,673,404	-		DZA65_RS08015	0.48	+0.9
1,673,404	-		DZA65_RS08015	0.48	+1.0
1,673,404	-		DZA65_RS08015	0.48	-0.1
1,673,735	+		DZA65_RS08015	0.86	+2.0
1,673,825	+				-0.3
1,673,852	+				+0.2
1,673,852	+				+0.5
1,673,852	+				+2.3
1,673,852	+				-1.4
1,673,853	-				+0.0
1,673,853	-				-1.7
1,673,853	-				+0.6
1,673,886	-				-1.3
1,673,890	+				+0.1
1,673,897	-				+0.9
1,673,911	-				+0.6
1,673,911	-				+0.1
1,673,911	-				-0.2
1,673,933	-				-0.9
1,673,946	+				-1.0
1,673,981	+				+0.3
1,673,981	+				+0.6
1,673,981	+				+1.3
1,673,982	-				+0.5
1,673,982	-				+0.3
1,673,982	-				-1.0
1,674,151	-		DZA65_RS08020	0.14	+1.0
1,674,221	-		DZA65_RS08020	0.22	+1.5
1,674,221	-		DZA65_RS08020	0.22	-0.0
1,674,221	-		DZA65_RS08020	0.22	-2.5
1,674,231	+		DZA65_RS08020	0.23	-0.3
1,674,232	-		DZA65_RS08020	0.23	-0.1
1,674,289	+		DZA65_RS08020	0.29	-3.3
1,674,289	+		DZA65_RS08020	0.29	+0.3
1,674,289	+		DZA65_RS08020	0.29	+1.2
1,674,289	+		DZA65_RS08020	0.29	+0.1
1,674,290	-		DZA65_RS08020	0.29	-0.1
1,674,290	-		DZA65_RS08020	0.29	-1.0
1,674,290	-		DZA65_RS08020	0.29	+0.3
1,674,301	+		DZA65_RS08020	0.31	+0.4
1,674,301	+		DZA65_RS08020	0.31	+1.9
1,674,302	-		DZA65_RS08020	0.31	+1.3
1,674,371	-		DZA65_RS08020	0.38	+1.1
1,674,529	+		DZA65_RS08020	0.55	+0.5
1,674,529	+		DZA65_RS08020	0.55	-2.2
1,674,529	+		DZA65_RS08020	0.55	+0.6
1,674,529	+		DZA65_RS08020	0.55	-0.4
1,674,529	+		DZA65_RS08020	0.55	+0.9
1,674,529	+		DZA65_RS08020	0.55	+0.7
1,674,530	-		DZA65_RS08020	0.55	+0.3
1,674,530	-		DZA65_RS08020	0.55	-0.3
1,674,530	-		DZA65_RS08020	0.55	-0.0
1,674,643	+		DZA65_RS08020	0.67	+0.4
1,674,658	-		DZA65_RS08020	0.69	-2.3
1,674,837	+		DZA65_RS08020	0.88	-0.1
1,674,838	-		DZA65_RS08020	0.88	+0.7
1,674,838	-		DZA65_RS08020	0.88	+1.0
1,674,846	+		DZA65_RS08020	0.89	+0.5
1,674,847	-		DZA65_RS08020	0.89	+0.6