Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07675

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,595,451	+				+2.0
1,595,452	-				-1.0
1,595,490	-				-0.2
1,595,526	-				+0.3
1,595,529	+				-0.6
1,595,547	+				-1.1
1,595,547	+				-0.2
1,595,631	+				+0.7
1,595,641	-				-0.0
1,595,651	+				-0.3
1,595,682	+				+0.5
1,595,683	-				+0.1
1,595,683	-				-0.5
1,595,683	-				+0.9
1,595,685	-				-0.4
1,595,687	+				-0.3
1,595,752	-				+0.5
1,595,778	+				+0.6
1,595,779	-				+0.2
1,595,822	-				+0.3
1,595,822	-				-0.2
1,595,822	-				+0.0
1,595,900	+				-0.2
1,595,900	+				-1.7
1,595,901	-				+1.8
1,595,919	-				+0.8
1,595,919	-				+0.1
1,595,951	+				-0.4
1,595,972	-				+0.4
1,595,972	-				-0.1
1,595,991	+				-0.2
1,595,991	+				+0.3
1,595,992	-				+0.3
1,595,992	-				-0.2
1,596,000	+				-1.3
1,596,000	+				+0.5
1,596,000	+				+0.2
1,596,000	+				+0.8
1,596,000	+				+0.1
1,596,000	+				+1.6
1,596,000	+				-0.0
1,596,000	+				-1.0
1,596,000	+				-0.3
1,596,000	+				-1.7
1,596,000	+				+0.7
1,596,000	+				-0.4
1,596,001	-				-0.9
1,596,001	-				-0.2
1,596,001	-				+0.1
1,596,001	-				-0.6
1,596,001	-				+0.8
1,596,001	-				+0.0
1,596,001	-				-0.3
1,596,001	-				-0.1
1,596,001	-				+0.2
1,596,001	-				+0.7
1,596,001	-				-1.0
1,596,036	+				+0.4
1,596,036	+				-0.3
1,596,037	-				+1.3
1,596,037	-				+0.6
1,596,037	-				-0.4
1,596,037	-				-1.4
1,596,037	-				+1.0
1,596,037	-				-0.5
1,596,037	-				-0.1
1,596,037	-				+0.9
1,596,059	+				-0.0
1,596,095	+		DZA65_RS07670	0.23	+0.2
1,596,095	+		DZA65_RS07670	0.23	+1.8
1,596,095	+		DZA65_RS07670	0.23	+0.6
1,596,095	+		DZA65_RS07670	0.23	+0.2
1,596,095	+		DZA65_RS07670	0.23	-0.4
1,596,096	-		DZA65_RS07670	0.24	+0.4
1,596,096	-		DZA65_RS07670	0.24	+1.3
1,596,096	-		DZA65_RS07670	0.24	+0.4
1,596,096	-		DZA65_RS07670	0.24	+1.8
1,596,096	-		DZA65_RS07670	0.24	+0.1
1,596,098	-		DZA65_RS07670	0.24	-2.0
1,596,099	+		DZA65_RS07670	0.25	-0.6
1,596,099	+		DZA65_RS07670	0.25	-0.5
1,596,099	+		DZA65_RS07670	0.25	+1.1
1,596,099	+		DZA65_RS07670	0.25	-0.0
1,596,099	+		DZA65_RS07670	0.25	+1.4
1,596,099	+		DZA65_RS07670	0.25	-0.1
1,596,100	-		DZA65_RS07670	0.25	+0.7
1,596,100	-		DZA65_RS07670	0.25	-1.1
1,596,100	-		DZA65_RS07670	0.25	+0.3
1,596,100	-		DZA65_RS07670	0.25	-0.2
1,596,100	-		DZA65_RS07670	0.25	-1.4
1,596,100	-		DZA65_RS07670	0.25	+0.2
1,596,105	+		DZA65_RS07670	0.27	-0.2
1,596,105	+		DZA65_RS07670	0.27	-1.0
1,596,105	+		DZA65_RS07670	0.27	-0.4
1,596,105	+		DZA65_RS07670	0.27	+0.7
1,596,105	+		DZA65_RS07670	0.27	+0.2
1,596,106	-		DZA65_RS07670	0.28	+0.3
1,596,106	-		DZA65_RS07670	0.28	+0.1
1,596,116	+		DZA65_RS07670	0.31	+0.3
1,596,116	+		DZA65_RS07670	0.31	+0.3
1,596,116	+		DZA65_RS07670	0.31	-0.9
1,596,117	-		DZA65_RS07670	0.32	-0.5
1,596,122	+		DZA65_RS07670	0.34	+1.9
1,596,122	+		DZA65_RS07670	0.34	+0.3
1,596,122	+		DZA65_RS07670	0.34	+0.1
1,596,122	+		DZA65_RS07670	0.34	-0.4
1,596,123	-		DZA65_RS07670	0.34	-0.2
1,596,123	-		DZA65_RS07670	0.34	-1.0
1,596,125	+		DZA65_RS07670	0.35	-0.2
1,596,126	-		DZA65_RS07670	0.35	-0.4
1,596,199	-		DZA65_RS07670	0.64	-0.7
1,596,205	+		DZA65_RS07670	0.66	-0.0
1,596,205	+		DZA65_RS07670	0.66	-1.2
1,596,205	+		DZA65_RS07670	0.66	-0.4
1,596,206	-		DZA65_RS07670	0.66	+0.9
1,596,227	+		DZA65_RS07670	0.74	+0.6
1,596,328	-				+0.5
1,596,379	-				+0.5
1,596,491	+		DZA65_RS07675	0.30	-1.5
1,596,491	+		DZA65_RS07675	0.30	-1.7
1,596,492	-		DZA65_RS07675	0.31	-0.9
1,596,497	+		DZA65_RS07675	0.33	-1.7
1,596,497	+		DZA65_RS07675	0.33	-0.7
1,596,497	+		DZA65_RS07675	0.33	-0.6
1,596,498	-		DZA65_RS07675	0.33	+0.2
1,596,498	-		DZA65_RS07675	0.33	-0.2
1,596,498	-		DZA65_RS07675	0.33	-1.7
1,596,517	+		DZA65_RS07675	0.40	+1.0
1,596,535	+		DZA65_RS07675	0.46	-0.2
1,596,535	+		DZA65_RS07675	0.46	+0.0
1,596,536	-		DZA65_RS07675	0.47	-0.9
1,596,536	-		DZA65_RS07675	0.47	+0.3
1,596,572	+		DZA65_RS07675	0.59	-0.7
1,596,573	-		DZA65_RS07675	0.60	-0.7
1,596,573	-		DZA65_RS07675	0.60	+0.6
1,596,590	+				+0.3
1,596,597	+		DZA65_RS07675	0.68	+0.0
1,596,667	+				+0.8
1,596,685	-				-3.3
1,596,704	+				-0.9
1,596,704	+				-1.0
1,596,705	-				+0.6
1,596,705	-				+1.4
1,596,705	-				-1.0
1,596,706	+				-1.1
1,596,706	+				-0.0
1,596,706	+				+0.8
1,596,706	+				+0.5
1,596,707	-				+0.6
1,596,707	-				-0.7
1,596,851	-		DZA65_RS07680	0.11	-0.2
1,596,877	+		DZA65_RS07680	0.20	-0.3
1,596,877	+		DZA65_RS07680	0.20	+1.3
1,596,877	+		DZA65_RS07680	0.20	-0.0
1,596,878	-		DZA65_RS07680	0.21	+1.0
1,596,878	-		DZA65_RS07680	0.21	+0.3
1,596,937	+		DZA65_RS07680	0.41	-0.4
1,596,987	+		DZA65_RS07680	0.59	+0.4
1,597,072	+		DZA65_RS07680	0.88	-0.1
1,597,072	+		DZA65_RS07680	0.88	+0.1
1,597,072	+		DZA65_RS07680	0.88	-0.5
1,597,073	-		DZA65_RS07680	0.89	+1.5
1,597,086	-				-0.3
1,597,103	+				+0.7
1,597,143	+				-1.0
1,597,143	+				+0.4
1,597,143	+				-0.1
1,597,144	-				+0.1
1,597,144	-				+0.3
1,597,158	-				-1.4
1,597,201	+				-1.3
1,597,201	+				+0.3
1,597,201	+				-0.3
1,597,202	-				-0.2
1,597,202	-				-0.5
1,597,202	-				-0.1
1,597,211	+				+0.2
1,597,211	+				+0.5
1,597,211	+				+0.7
1,597,212	-				+0.4
1,597,212	-				+0.4
1,597,219	+				-2.9
1,597,219	+				-0.4
1,597,219	+				-0.0
1,597,220	-				-2.0
1,597,220	-				-0.7
1,597,270	-				-0.6
1,597,270	-				-1.6
1,597,271	+				-0.1
1,597,271	+				+0.7
1,597,272	-				+0.5
1,597,272	-				-0.4
1,597,272	-				+0.3
1,597,272	-				-0.9
1,597,297	+				-1.5
1,597,298	-				-0.7
1,597,351	+				+0.8
1,597,352	-				-0.3
1,597,352	-				+0.7
1,597,352	-				+0.3
1,597,352	-				-0.3
1,597,376	+				-1.3
1,597,376	+				+0.8
1,597,376	+				+0.2
1,597,376	+				-0.2
1,597,377	-				-1.1
1,597,377	-				+0.8
1,597,377	-				-0.0
1,597,377	-				-1.3
1,597,509	+		DZA65_RS07685	0.51	+1.6
1,597,510	-		DZA65_RS07685	0.51	+0.4
1,597,510	-		DZA65_RS07685	0.51	+0.8
1,597,515	+		DZA65_RS07685	0.53	-0.3
1,597,516	-		DZA65_RS07685	0.54	-0.9
1,597,652	+				+0.6
1,597,652	+				+0.7
1,597,652	+				+0.6
1,597,653	-				-0.2