Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,575,874	+		DZA65_RS07550	0.80	+0.7
1,575,874	+		DZA65_RS07550	0.80	+0.5
1,575,874	+		DZA65_RS07550	0.80	-2.3
1,575,959	+		DZA65_RS07550	0.86	-0.6
1,576,065	+				-0.5
1,576,169	+				-0.7
1,576,169	+				+1.7
1,576,169	+				-0.2
1,576,170	-				+1.1
1,576,199	+				+0.6
1,576,247	+				-0.9
1,576,248	-				-0.3
1,576,251	+				+1.5
1,576,252	-				-0.3
1,576,252	-				+0.1
1,576,257	+				-0.2
1,576,257	+				-0.9
1,576,272	+				+0.1
1,576,272	+				+0.3
1,576,273	-				-0.7
1,576,273	-				+0.4
1,576,273	-				+0.9
1,576,277	+				-0.6
1,576,278	-				+0.6
1,576,278	-				-0.5
1,576,278	-				-0.3
1,576,283	+				-0.7
1,576,284	-				-1.1
1,576,284	-				+0.3
1,576,287	-				+0.5
1,576,290	+				+0.8
1,576,291	-				-0.4
1,576,297	+				+0.9
1,576,297	+				-1.0
1,576,298	-				-2.0
1,576,300	+				-0.4
1,576,300	+				-0.0
1,576,412	-				-0.3
1,576,437	+				-0.3
1,576,437	+				+0.4
1,576,464	+				-0.5
1,576,464	+				+0.3
1,576,464	+				-0.5
1,576,465	-				+0.1
1,576,465	-				-0.2
1,576,497	+				-0.8
1,576,498	-				+0.1
1,576,498	-				-1.1
1,576,506	+				+0.1
1,576,506	+				-1.1
1,576,510	+				-0.5
1,576,510	+				-1.1
1,576,510	+				-1.1
1,576,510	+				-0.3
1,576,510	+				+0.5
1,576,511	-				-2.9
1,576,534	+				-0.4
1,576,535	-				-0.3
1,576,535	-				-2.7
1,576,535	-				-0.3
1,576,535	-				+0.8
1,576,535	-				-0.6
1,576,535	-				-2.3
1,576,611	-				-0.4
1,576,630	+				+0.3
1,576,720	+				-0.3
1,576,720	+				+1.7
1,576,720	+				-0.5
1,576,721	-				+0.8
1,576,721	-				-0.5
1,576,786	-				+1.3
1,576,883	-				+0.0
1,576,940	+		DZA65_RS07555	0.12	+0.5
1,576,940	+		DZA65_RS07555	0.12	-0.8
1,576,944	+		DZA65_RS07555	0.13	-2.0
1,576,944	+		DZA65_RS07555	0.13	-0.7
1,576,944	+		DZA65_RS07555	0.13	-0.9
1,576,944	+		DZA65_RS07555	0.13	-1.5
1,576,990	+		DZA65_RS07555	0.18	+0.9
1,577,068	-		DZA65_RS07555	0.26	+0.1
1,577,082	-		DZA65_RS07555	0.27	-0.5
1,577,706	+				-1.0
1,577,706	+				+0.3
1,577,812	+				-0.5
1,577,956	-				+0.3
1,577,958	-				-0.7
1,577,958	-				+0.3
1,578,050	+				-0.1
1,578,138	+		DZA65_RS07560	0.18	-0.4
1,578,175	+		DZA65_RS07560	0.34	-0.0
1,578,175	+		DZA65_RS07560	0.34	+0.3
1,578,179	-		DZA65_RS07560	0.35	+0.9
1,578,227	+		DZA65_RS07560	0.56	-1.1
1,578,277	-		DZA65_RS07560	0.77	+0.1
1,578,330	-				+0.9
1,578,330	-				-0.4
1,578,347	+				-0.1
1,578,349	+				+0.8
1,578,405	+		DZA65_RS07565	0.23	-2.5
1,578,419	+		DZA65_RS07565	0.27	+0.2
1,578,553	-		DZA65_RS07565	0.70	-0.8
1,578,553	-		DZA65_RS07565	0.70	+0.6
1,578,553	-		DZA65_RS07565	0.70	-1.9
1,578,553	-		DZA65_RS07565	0.70	-0.7
1,578,553	-		DZA65_RS07565	0.70	-0.0
1,578,724	+				+0.0
1,578,749	-				+0.4