Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,448,220	+		DZA65_RS06990	0.31	-0.4
1,448,221	-		DZA65_RS06990	0.31	-1.2
1,448,222	+		DZA65_RS06990	0.31	+0.3
1,448,222	+		DZA65_RS06990	0.31	-0.7
1,448,222	+		DZA65_RS06990	0.31	-1.8
1,448,222	+		DZA65_RS06990	0.31	-1.8
1,448,222	+		DZA65_RS06990	0.31	-0.2
1,448,222	+		DZA65_RS06990	0.31	+0.5
1,448,222	+		DZA65_RS06990	0.31	-2.0
1,448,223	-		DZA65_RS06990	0.31	+0.8
1,448,223	-		DZA65_RS06990	0.31	-2.2
1,448,223	-		DZA65_RS06990	0.31	+0.9
1,448,223	-		DZA65_RS06990	0.31	-0.7
1,448,223	-		DZA65_RS06990	0.31	+0.7
1,448,223	-		DZA65_RS06990	0.31	-1.1
1,448,223	-		DZA65_RS06990	0.31	-0.2
1,448,255	+		DZA65_RS06990	0.35	+0.3
1,448,256	-		DZA65_RS06990	0.35	-0.5
1,448,312	+		DZA65_RS06990	0.40	+0.3
1,448,313	-		DZA65_RS06990	0.40	-0.1
1,448,313	-		DZA65_RS06990	0.40	+2.1
1,448,452	+		DZA65_RS06990	0.54	+0.4
1,448,452	+		DZA65_RS06990	0.54	-0.8
1,448,452	+		DZA65_RS06990	0.54	-0.7
1,448,452	+		DZA65_RS06990	0.54	+0.2
1,448,452	+		DZA65_RS06990	0.54	-0.7
1,448,453	-		DZA65_RS06990	0.54	+0.5
1,448,537	+		DZA65_RS06990	0.62	+1.4
1,448,537	+		DZA65_RS06990	0.62	+0.8
1,448,537	+		DZA65_RS06990	0.62	-1.0
1,448,537	+		DZA65_RS06990	0.62	-0.2
1,448,537	+		DZA65_RS06990	0.62	+1.5
1,448,538	-		DZA65_RS06990	0.62	+1.3
1,448,538	-		DZA65_RS06990	0.62	+2.0
1,448,538	-		DZA65_RS06990	0.62	-2.7
1,448,538	-		DZA65_RS06990	0.62	-1.5
1,448,538	-		DZA65_RS06990	0.62	-0.5
1,448,538	-		DZA65_RS06990	0.62	-0.5
1,448,615	+		DZA65_RS06990	0.70	-0.1
1,448,615	+		DZA65_RS06990	0.70	+0.7
1,448,615	+		DZA65_RS06990	0.70	-1.7
1,448,615	+		DZA65_RS06990	0.70	-0.5
1,448,616	-		DZA65_RS06990	0.70	+1.2
1,448,616	-		DZA65_RS06990	0.70	-0.4
1,448,616	-		DZA65_RS06990	0.70	-2.2
1,448,616	-		DZA65_RS06990	0.70	+0.2
1,448,630	+		DZA65_RS06990	0.71	+1.6
1,448,631	-		DZA65_RS06990	0.72	+1.6
1,448,633	+		DZA65_RS06990	0.72	+0.8
1,448,633	+		DZA65_RS06990	0.72	+0.5
1,448,633	+		DZA65_RS06990	0.72	+0.2
1,448,633	+		DZA65_RS06990	0.72	+1.2
1,448,633	+		DZA65_RS06990	0.72	-0.3
1,448,633	+		DZA65_RS06990	0.72	-0.2
1,448,633	+		DZA65_RS06990	0.72	+0.6
1,448,634	-		DZA65_RS06990	0.72	+0.8
1,448,671	-		DZA65_RS06990	0.76	+0.3
1,448,671	-		DZA65_RS06990	0.76	-0.5
1,448,718	+		DZA65_RS06990	0.80	-0.7
1,448,756	+		DZA65_RS06990	0.84	-0.2
1,448,756	+		DZA65_RS06990	0.84	+0.2
1,448,757	-		DZA65_RS06990	0.84	+0.3
1,448,757	-		DZA65_RS06990	0.84	-0.5
1,448,757	-		DZA65_RS06990	0.84	+2.6
1,448,757	-				+0.3
1,448,757	-		DZA65_RS06990	0.84	-0.6
1,448,757	-		DZA65_RS06990	0.84	-0.8
1,448,757	-		DZA65_RS06990	0.84	+0.8
1,448,874	+				+0.6
1,448,954	+				-0.7
1,448,955	-				+0.0
1,448,955	-				-1.3
1,448,991	+				-0.3
1,448,992	-				+0.3
1,448,995	+				-0.7
1,449,001	+				+0.1
1,449,005	+				-0.9
1,449,005	+				+0.1
1,449,005	+				-0.7
1,449,005	+				-0.1
1,449,005	+				-0.7
1,449,006	-				-1.6
1,449,006	-				+1.2
1,449,058	+				-0.5
1,449,196	-				+0.4
1,449,218	+				-0.2
1,449,219	-				-1.1
1,449,329	-		DZA65_RS06995	0.10	+0.1
1,449,360	-		DZA65_RS06995	0.13	-0.5
1,449,360	-		DZA65_RS06995	0.13	-0.2
1,449,441	-		DZA65_RS06995	0.18	+0.3
1,449,537	+		DZA65_RS06995	0.25	-0.5
1,449,537	+		DZA65_RS06995	0.25	-2.0
1,449,537	+		DZA65_RS06995	0.25	-2.5
1,449,538	-		DZA65_RS06995	0.25	+0.1
1,449,538	-		DZA65_RS06995	0.25	-1.0
1,449,538	-		DZA65_RS06995	0.25	-1.0
1,449,538	-		DZA65_RS06995	0.25	-1.8
1,449,538	-		DZA65_RS06995	0.25	+0.8
1,449,601	-		DZA65_RS06995	0.29	+1.1
1,449,628	-		DZA65_RS06995	0.31	+0.2
1,449,628	-		DZA65_RS06995	0.31	+0.1
1,449,705	+		DZA65_RS06995	0.36	-1.0
1,449,705	+		DZA65_RS06995	0.36	+0.2
1,449,706	-		DZA65_RS06995	0.36	-0.1
1,449,706	-		DZA65_RS06995	0.36	-0.7
1,449,837	+		DZA65_RS06995	0.45	-0.1
1,449,838	-		DZA65_RS06995	0.45	-0.7
1,450,008	-		DZA65_RS06995	0.57	-0.4
1,450,026	-		DZA65_RS06995	0.58	-0.1
1,450,054	+		DZA65_RS06995	0.60	+0.1
1,450,055	-				-1.2
1,450,125	-		DZA65_RS06995	0.65	+0.1
1,450,242	+		DZA65_RS06995	0.73	-0.7
1,450,242	+		DZA65_RS06995	0.73	-0.7
1,450,243	-		DZA65_RS06995	0.73	-1.2
1,450,243	-		DZA65_RS06995	0.73	+0.7
1,450,243	-		DZA65_RS06995	0.73	-2.0
1,450,243	-		DZA65_RS06995	0.73	+0.8
1,450,246	+		DZA65_RS06995	0.73	+1.3
1,450,246	+		DZA65_RS06995	0.73	-0.4
1,450,246	+		DZA65_RS06995	0.73	+0.0
1,450,246	+		DZA65_RS06995	0.73	+0.3
1,450,246	+		DZA65_RS06995	0.73	-0.5
1,450,246	+		DZA65_RS06995	0.73	+0.5
1,450,246	+		DZA65_RS06995	0.73	+0.3
1,450,246	+		DZA65_RS06995	0.73	-0.5
1,450,246	+		DZA65_RS06995	0.73	+0.1
1,450,247	-		DZA65_RS06995	0.73	+0.0
1,450,247	-		DZA65_RS06995	0.73	-0.2
1,450,331	-		DZA65_RS06995	0.79	+0.2
1,450,774	+				+0.7
1,450,775	-				-0.7
1,450,866	+		DZA65_RS07000	0.17	-0.9
1,450,866	+		DZA65_RS07000	0.17	+0.4
1,450,866	+		DZA65_RS07000	0.17	-1.4
1,450,893	+		DZA65_RS07000	0.21	+0.1
1,450,894	-				+0.9
1,450,894	-		DZA65_RS07000	0.21	-1.5
1,450,894	-		DZA65_RS07000	0.21	-1.2
1,450,894	-		DZA65_RS07000	0.21	-2.5
1,451,119	-		DZA65_RS07000	0.49	-0.7
1,451,254	+		DZA65_RS07000	0.66	-0.1
1,451,255	-		DZA65_RS07000	0.67	-1.1
1,451,278	+		DZA65_RS07000	0.69	-0.0
1,451,437	-		DZA65_RS07000	0.90	-0.7
1,451,437	-		DZA65_RS07000	0.90	+0.6
1,451,437	-		DZA65_RS07000	0.90	-1.8
1,451,553	+				+0.5
1,451,554	-				-0.5
1,451,554	-				+0.8
1,451,554	-				-1.2
1,451,620	+				-1.2
1,451,645	+				-0.6