Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,419,159	+		DZA65_RS06835	0.49	-1.5
1,419,159	+		DZA65_RS06835	0.49	-1.4
1,419,160	-				-0.4
1,419,315	+		DZA65_RS06835	0.58	-0.7
1,419,316	-		DZA65_RS06835	0.58	-0.6
1,419,359	+		DZA65_RS06835	0.60	+0.4
1,419,359	+		DZA65_RS06835	0.60	-1.1
1,419,799	+		DZA65_RS06835	0.85	+1.1
1,419,799	+		DZA65_RS06835	0.85	-0.9
1,419,971	+				-0.2
1,420,058	+				-2.6
1,420,059	-				-0.4
1,420,061	+				-0.6
1,420,062	-				-0.1
1,420,077	+				-0.7
1,420,077	+				+0.5
1,420,078	-				-2.8
1,420,078	-				-0.1
1,420,125	+				-0.6
1,420,164	+				-1.8
1,420,164	+				-0.5
1,420,164	+				-0.6
1,420,164	+				-0.3
1,420,165	-				-1.6
1,420,165	-				-0.8
1,420,165	-				-0.4
1,420,166	+				-1.6
1,420,304	+		DZA65_RS06840	0.29	-2.6
1,420,304	+		DZA65_RS06840	0.29	-2.0
1,420,322	+		DZA65_RS06840	0.31	+0.4
1,420,322	+		DZA65_RS06840	0.31	-0.3
1,420,323	-		DZA65_RS06840	0.31	-0.4
1,420,325	+		DZA65_RS06840	0.32	-0.6
1,420,326	-		DZA65_RS06840	0.32	-2.0
1,420,326	-		DZA65_RS06840	0.32	+0.1
1,420,428	+		DZA65_RS06840	0.46	-0.6
1,420,547	+		DZA65_RS06840	0.63	-1.3
1,420,547	+		DZA65_RS06840	0.63	-0.6
1,420,547	+		DZA65_RS06840	0.63	+0.9
1,420,547	+		DZA65_RS06840	0.63	-1.0
1,420,548	-		DZA65_RS06840	0.63	-0.2
1,420,548	-		DZA65_RS06840	0.63	-1.0
1,420,548	-		DZA65_RS06840	0.63	-0.8
1,420,548	-		DZA65_RS06840	0.63	-1.0
1,420,548	-		DZA65_RS06840	0.63	-1.8
1,420,548	-		DZA65_RS06840	0.63	-2.2
1,420,706	-		DZA65_RS06840	0.85	-2.5
1,420,782	-				-2.6
1,420,805	+				+0.2
1,420,829	+				+1.0
1,420,829	+				+0.8
1,420,829	+				-0.1
1,420,829	+				-1.0
1,420,830	-				-2.0
1,420,830	-				-1.4
1,420,888	+				+0.6
1,420,925	+				-0.1
1,420,989	+				+0.1
1,421,002	+				-1.1
1,421,002	+				+0.1
1,421,002	+				-1.5
1,421,002	+				-1.3
1,421,002	+				-1.5
1,421,002	+				-2.0
1,421,005	+				-0.6
1,421,005	+				-1.2
1,421,005	+				-0.9
1,421,005	+				-1.8
1,421,005	+				+0.4
1,421,005	+				+0.4
1,421,005	+				-1.4
1,421,005	+				-1.2
1,421,005	+				-0.3
1,421,005	+				-1.2
1,421,005	+				-0.6
1,421,005	+				-2.6
1,421,005	+				+0.4
1,421,005	+				-2.5
1,421,005	+				-2.2
1,421,005	+				-0.6
1,421,005	+				-1.6