Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,347,409	-				+0.0
1,347,411	+				-0.2
1,347,412	-				-0.8
1,347,427	+				+1.1
1,347,427	+				-1.0
1,347,428	-				-0.4
1,347,428	-				+0.3
1,347,463	-				-0.5
1,347,463	-				+0.4
1,347,509	+		DZA65_RS06470	0.13	-0.2
1,347,509	+		DZA65_RS06470	0.13	+0.3
1,347,509	+		DZA65_RS06470	0.13	-1.7
1,347,509	+		DZA65_RS06470	0.13	+0.9
1,347,509	+		DZA65_RS06470	0.13	-2.0
1,347,510	-		DZA65_RS06470	0.13	+0.2
1,347,510	-		DZA65_RS06470	0.13	+0.4
1,347,510	-		DZA65_RS06470	0.13	-1.0
1,347,552	-		DZA65_RS06470	0.19	-1.4
1,347,698	+		DZA65_RS06470	0.39	-0.8
1,347,722	+		DZA65_RS06470	0.43	-0.6
1,347,822	+		DZA65_RS06470	0.57	+0.0
1,347,882	+		DZA65_RS06470	0.65	-0.2
1,347,882	+		DZA65_RS06470	0.65	-1.0
1,347,882	+		DZA65_RS06470	0.65	-1.2
1,347,882	+		DZA65_RS06470	0.65	+0.7
1,347,882	+		DZA65_RS06470	0.65	+0.8
1,347,883	-		DZA65_RS06470	0.65	-0.1
1,347,883	-		DZA65_RS06470	0.65	+0.2
1,347,883	-		DZA65_RS06470	0.65	+0.7
1,347,883	-		DZA65_RS06470	0.65	-0.5
1,347,883	-		DZA65_RS06470	0.65	-0.5
1,347,883	-		DZA65_RS06470	0.65	+0.4
1,347,883	-		DZA65_RS06470	0.65	+0.8
1,348,089	+				-1.2
1,348,090	-				+0.2
1,348,090	-				+0.8
1,348,129	-				-3.0
1,348,144	+				+0.3
1,348,199	+				+0.2
1,348,199	+				-1.4
1,348,200	-				-1.2
1,348,200	-				+1.7
1,348,202	+				+0.2
1,348,202	+				-0.5
1,348,202	+				+0.0
1,348,203	-				+0.1
1,348,203	-				+0.2
1,348,219	+				+0.1
1,348,220	-				-0.0
1,348,233	+				-0.1
1,348,234	-				+0.4
1,348,236	+				+0.0
1,348,236	+				-0.2
1,348,236	+				+0.5
1,348,236	+				-1.0
1,348,236	+				-0.2
1,348,236	+				+1.0
1,348,236	+				-1.2
1,348,236	+				+0.7
1,348,236	+				+0.1
1,348,236	+				+0.5
1,348,237	-				+0.4
1,348,237	-				-0.1
1,348,237	-				-1.1
1,348,237	-				-0.6
1,348,240	+				-1.4
1,348,240	+				-0.2
1,348,240	+				-0.5
1,348,240	+				-1.6
1,348,240	+				-0.6
1,348,240	+				-0.4
1,348,240	+				-0.1
1,348,240	+				+0.1
1,348,240	+				-0.4
1,348,241	-				-0.6
1,348,241	-				+0.1
1,348,241	-				+0.9
1,348,241	-				+0.4
1,348,241	-				-1.9
1,348,241	-				+0.0
1,348,241	-				+1.1
1,348,241	-				+0.4
1,348,241	-				+0.4
1,348,241	-				-0.4
1,348,279	-				+0.6
1,348,279	-				-0.0
1,348,324	+				+0.9
1,348,324	+				-1.2
1,348,325	-				+1.1
1,348,333	+				-0.6
1,348,334	-				+1.4
1,348,334	-				+0.4
1,348,356	+				+0.0
1,348,356	+				-1.4
1,348,357	-				+1.2
1,348,357	-				+0.2
1,348,357	-				+0.3
1,348,396	+				+0.3
1,348,397	-				+0.7
1,348,428	+				+0.4
1,348,429	-				+0.2
1,348,433	+				-0.8
1,348,480	-		DZA65_RS06475	0.17	-0.2
1,348,489	-		DZA65_RS06475	0.19	-0.9
1,348,531	+		DZA65_RS06475	0.28	-0.1
1,348,532	-		DZA65_RS06475	0.29	-0.2
1,348,532	-		DZA65_RS06475	0.29	-0.6
1,348,532	-		DZA65_RS06475	0.29	-0.5
1,348,532	-		DZA65_RS06475	0.29	-1.0
1,348,553	-		DZA65_RS06475	0.33	-0.9
1,348,692	-		DZA65_RS06475	0.64	-1.0
1,348,901	+				-1.2
1,348,929	+				-0.7
1,348,929	+				+0.4
1,348,929	+				-0.8
1,348,935	+				+0.6
1,348,935	+				+0.9
1,348,935	+				-0.3
1,349,061	+				+0.2
1,349,062	-				+0.5
1,349,062	-				+1.2
1,349,283	+		DZA65_RS06480	0.20	+0.4
1,349,283	+		DZA65_RS06480	0.20	+0.1
1,349,283	+		DZA65_RS06480	0.20	-0.8
1,349,283	+		DZA65_RS06480	0.20	-1.2
1,349,283	+		DZA65_RS06480	0.20	+0.9
1,349,284	-		DZA65_RS06480	0.20	+1.6
1,349,284	-		DZA65_RS06480	0.20	+0.3
1,349,284	-		DZA65_RS06480	0.20	-0.7
1,349,284	-		DZA65_RS06480	0.20	-1.8
1,349,284	-		DZA65_RS06480	0.20	-0.5
1,349,347	-		DZA65_RS06480	0.23	+0.4
1,349,349	+		DZA65_RS06480	0.23	+1.3
1,349,350	-		DZA65_RS06480	0.24	-0.4
1,349,350	-		DZA65_RS06480	0.24	+0.8
1,349,350	-		DZA65_RS06480	0.24	-0.2
1,349,350	-		DZA65_RS06480	0.24	+0.6
1,349,416	+		DZA65_RS06480	0.27	-2.1
1,349,417	-		DZA65_RS06480	0.27	-1.8
1,349,417	-		DZA65_RS06480	0.27	-2.6
1,349,709	+		DZA65_RS06480	0.41	+0.3
1,349,710	-		DZA65_RS06480	0.41	+0.6
1,349,749	-		DZA65_RS06480	0.43	+1.3
1,349,819	-		DZA65_RS06480	0.47	-0.2
1,349,819	-		DZA65_RS06480	0.47	+4.4
1,349,819	-		DZA65_RS06480	0.47	+0.8
1,349,819	-		DZA65_RS06480	0.47	-0.0