Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,321,612	+		DZA65_RS06345	0.89	-1.4
1,321,612	+		DZA65_RS06345	0.89	-1.1
1,321,612	+		DZA65_RS06345	0.89	+0.2
1,321,613	-		DZA65_RS06345	0.89	-0.1
1,321,613	-		DZA65_RS06345	0.89	-0.2
1,321,673	+				-2.1
1,321,673	+				-0.6
1,321,673	+				-0.0
1,321,673	+				-1.1
1,321,674	-				+0.6
1,321,698	+				-0.8
1,321,698	+				+0.1
1,321,698	+				+0.9
1,321,699	-				+0.7
1,321,699	-				+0.3
1,321,699	-				-1.3
1,321,699	-				+0.3
1,321,699	-				-0.9
1,321,729	+				-0.5
1,321,729	+				+0.5
1,321,729	+				+0.1
1,321,729	+				-0.1
1,321,730	-				+0.6
1,321,730	-				-0.9
1,321,732	+				+0.2
1,321,732	+				-0.4
1,321,733	-				-0.1
1,321,733	-				+0.3
1,321,733	-				+0.0
1,321,928	-		DZA65_RS06350	0.21	+0.5
1,321,964	-		DZA65_RS06350	0.25	+0.1
1,322,030	+		DZA65_RS06350	0.34	+0.0
1,322,030	+		DZA65_RS06350	0.34	-1.0
1,322,030	+		DZA65_RS06350	0.34	+0.0
1,322,030	+		DZA65_RS06350	0.34	+0.5
1,322,030	+		DZA65_RS06350	0.34	-0.4
1,322,031	-		DZA65_RS06350	0.34	-0.4
1,322,031	-		DZA65_RS06350	0.34	+0.4
1,322,031	-				+1.4
1,322,031	-		DZA65_RS06350	0.34	+1.1
1,322,031	-		DZA65_RS06350	0.34	+0.2
1,322,091	+		DZA65_RS06350	0.42	-0.1
1,322,091	+		DZA65_RS06350	0.42	-0.0
1,322,092	-		DZA65_RS06350	0.42	+0.7
1,322,158	+		DZA65_RS06350	0.50	-1.6
1,322,159	-		DZA65_RS06350	0.51	-0.1
1,322,283	+		DZA65_RS06350	0.67	+2.3
1,322,316	+		DZA65_RS06350	0.71	-0.0
1,322,317	-		DZA65_RS06350	0.71	-0.3
1,322,338	+		DZA65_RS06350	0.74	-0.4
1,322,338	+		DZA65_RS06350	0.74	+0.5
1,322,542	+				-0.0
1,322,543	-				-0.5
1,322,548	+				-0.3
1,322,548	+				-1.6
1,322,548	+				-0.4
1,322,565	+				-1.4
1,322,565	+				+0.2
1,322,565	+				+0.1
1,322,570	-				-0.3
1,322,608	-				-1.8
1,322,617	+				+0.1
1,322,617	+				+1.0
1,322,618	-				-0.1
1,322,719	-		DZA65_RS06355	0.18	-1.4
1,322,752	+		DZA65_RS06355	0.23	-1.6
1,322,752	+		DZA65_RS06355	0.23	+0.1
1,322,752	+		DZA65_RS06355	0.23	-0.0
1,322,753	-		DZA65_RS06355	0.23	+0.4
1,322,800	+		DZA65_RS06355	0.30	-0.7
1,322,803	-		DZA65_RS06355	0.31	+0.5
1,322,803	-		DZA65_RS06355	0.31	-1.9
1,322,803	-		DZA65_RS06355	0.31	-0.8
1,322,814	+		DZA65_RS06355	0.32	-0.2
1,322,814	+		DZA65_RS06355	0.32	+1.0
1,322,814	+		DZA65_RS06355	0.32	-0.4
1,322,843	+		DZA65_RS06355	0.37	-0.2
1,322,875	+		DZA65_RS06355	0.42	+0.4
1,322,876	-		DZA65_RS06355	0.42	+1.3
1,322,876	-		DZA65_RS06355	0.42	-0.4
1,322,876	-		DZA65_RS06355	0.42	-0.8
1,322,876	-		DZA65_RS06355	0.42	-0.8
1,322,876	-		DZA65_RS06355	0.42	+0.2
1,323,118	+		DZA65_RS06355	0.80	+1.8
1,323,119	-		DZA65_RS06355	0.80	-0.4
1,323,134	+		DZA65_RS06355	0.82	-1.3
1,323,135	-		DZA65_RS06355	0.82	-1.4
1,323,135	-		DZA65_RS06355	0.82	-0.7
1,323,160	+		DZA65_RS06355	0.86	+0.6
1,323,160	+		DZA65_RS06355	0.86	-0.8
1,323,160	+		DZA65_RS06355	0.86	-0.6
1,323,160	+		DZA65_RS06355	0.86	+0.3
1,323,161	-		DZA65_RS06355	0.86	-0.3
1,323,200	+				-0.4
1,323,201	-				-0.5
1,323,201	-				+0.7
1,323,214	+				+0.4
1,323,215	-				-0.5
1,323,215	-				+0.4
1,323,250	+				-1.0
1,323,250	+				+0.0
1,323,250	+				+1.3
1,323,251	-				-0.0
1,323,254	-				-0.2
1,323,254	-				+1.4
1,323,254	-				+0.1
1,323,505	+		DZA65_RS06360	0.42	-1.2
1,323,505	+		DZA65_RS06360	0.42	-1.0
1,323,506	-		DZA65_RS06360	0.42	-1.6
1,323,506	-		DZA65_RS06360	0.42	+0.2
1,323,697	+		DZA65_RS06360	0.70	+1.4
1,323,697	+		DZA65_RS06360	0.70	+0.8
1,323,697	+		DZA65_RS06360	0.70	+0.2
1,323,808	+		DZA65_RS06360	0.86	+0.6
1,323,950	+				+0.4
1,323,950	+				-0.2
1,323,950	+				+1.0
1,323,951	-				+0.3
1,323,951	-				-2.1
1,323,951	-				-1.4
1,323,951	-				-0.1
1,324,162	+		DZA65_RS06365	0.11	-1.1
1,324,162	+		DZA65_RS06365	0.11	+0.2
1,324,162	+		DZA65_RS06365	0.11	-1.1
1,324,162	+		DZA65_RS06365	0.11	-0.3
1,324,162	+		DZA65_RS06365	0.11	-0.6
1,324,222	+		DZA65_RS06365	0.13	+0.4
1,324,222	+		DZA65_RS06365	0.13	+0.6
1,324,222	+		DZA65_RS06365	0.13	-0.0
1,324,223	-		DZA65_RS06365	0.13	-0.8
1,324,223	-		DZA65_RS06365	0.13	-0.0
1,324,223	-		DZA65_RS06365	0.13	-0.5