Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06205

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,283,169	-				+0.0
1,283,208	-				-0.1
1,283,263	+				-1.3
1,283,263	+				+0.6
1,283,264	-				+1.9
1,283,267	+				+0.7
1,283,267	+				+0.6
1,283,267	+				-0.8
1,283,267	+				+0.6
1,283,267	+				+0.4
1,283,267	+				+0.6
1,283,268	-				-0.3
1,283,309	+		DZA65_RS06195	0.17	-0.0
1,283,309	+		DZA65_RS06195	0.17	-0.5
1,283,310	-		DZA65_RS06195	0.17	-1.7
1,283,310	-		DZA65_RS06195	0.17	+0.6
1,283,403	+		DZA65_RS06195	0.41	+0.0
1,283,403	+		DZA65_RS06195	0.41	+0.4
1,283,404	-		DZA65_RS06195	0.41	-1.1
1,283,426	+		DZA65_RS06195	0.46	+0.7
1,283,427	-		DZA65_RS06195	0.47	-0.9
1,283,453	+		DZA65_RS06195	0.53	-0.8
1,283,454	-		DZA65_RS06195	0.53	+0.4
1,283,457	-		DZA65_RS06195	0.54	+0.6
1,283,571	+		DZA65_RS06195	0.83	-0.6
1,283,597	+		DZA65_RS06195	0.89	+0.2
1,283,600	+				-0.6
1,283,601	-				-0.4
1,283,642	-				+0.1
1,283,670	+				+0.1
1,283,688	+				-0.3
1,283,700	+				-1.4
1,283,775	+				+0.2
1,283,823	+				-0.7
1,283,823	+				-0.7
1,283,823	+				-2.6
1,283,823	+				-0.1
1,283,832	+				-0.6
1,283,834	+				-0.4
1,283,834	+				-0.5
1,283,834	+				-0.2
1,283,835	-				+0.9
1,283,836	+				-0.2
1,283,836	+				-0.9
1,283,836	+				-0.9
1,283,836	+				+0.0
1,283,836	+				+0.0
1,283,837	-				-0.2
1,283,837	-				+0.9
1,283,837	-				+0.8
1,283,837	-				-0.4
1,283,837	-				-0.0
1,283,837	-				-1.2
1,283,837	-				+0.7
1,283,837	-				+0.3
1,283,837	-				-0.5
1,283,837	-				-0.9
1,283,863	+				+0.0
1,283,863	+				-0.4
1,283,864	-				-0.5
1,283,905	-				-1.9
1,283,907	+				-0.2
1,283,908	-				-0.5
1,283,908	-				-0.3
1,283,937	+				+0.0
1,283,938	-				+1.4
1,283,938	-				-0.1
1,283,938	-				+0.2
1,283,988	-				-0.1
1,284,030	+				+0.5
1,284,033	-				+2.4
1,284,040	-				-0.3
1,284,040	-				+1.6
1,284,044	+				-0.8
1,284,048	+				+1.0
1,284,058	-				-0.5
1,284,084	-				+1.2
1,284,124	+				-2.8
1,284,124	+				-0.1
1,284,125	-				+0.0
1,284,125	-				+0.6
1,284,125	-				-0.6
1,284,125	-				+0.9
1,284,132	+				-0.9
1,284,157	-				+0.4
1,284,157	-				-0.6
1,284,187	+				-0.8
1,284,187	+				-1.5
1,284,188	-				-1.2
1,284,188	-				+0.3
1,284,190	+				-1.6
1,284,190	+				+0.4
1,284,193	+				-0.6
1,284,194	-				+0.0
1,284,194	-				-0.3
1,284,224	+				+0.6
1,284,224	+				+1.4
1,284,276	+				-1.5
1,284,276	+				+0.1
1,284,276	+				-1.3
1,284,277	-				-0.1
1,284,277	-				-0.3
1,284,277	-				+0.4
1,284,307	-				-0.5
1,284,310	-		DZA65_RS06205	0.10	+0.4
1,284,316	+		DZA65_RS06205	0.11	+0.4
1,284,414	-		DZA65_RS06205	0.17	+2.0
1,284,414	-		DZA65_RS06205	0.17	+0.2
1,284,426	+		DZA65_RS06205	0.17	-0.3
1,284,426	+		DZA65_RS06205	0.17	-1.0
1,284,447	+		DZA65_RS06205	0.19	+1.3
1,284,447	+		DZA65_RS06205	0.19	+0.6
1,284,448	-		DZA65_RS06205	0.19	+0.4
1,284,448	-		DZA65_RS06205	0.19	+0.2
1,284,459	+		DZA65_RS06205	0.20	-0.3
1,284,460	-		DZA65_RS06205	0.20	+0.7
1,284,533	-		DZA65_RS06205	0.24	-0.7
1,284,560	+		DZA65_RS06205	0.26	-2.0
1,284,561	-				-1.6
1,284,561	-		DZA65_RS06205	0.26	+0.6
1,284,562	+		DZA65_RS06205	0.26	-1.6
1,284,562	+		DZA65_RS06205	0.26	-1.3
1,284,562	+		DZA65_RS06205	0.26	-0.9
1,284,562	+		DZA65_RS06205	0.26	+0.8
1,284,562	+		DZA65_RS06205	0.26	+2.4
1,284,562	+		DZA65_RS06205	0.26	-1.4
1,284,563	-		DZA65_RS06205	0.26	+1.2
1,284,563	-		DZA65_RS06205	0.26	-0.2
1,284,563	-		DZA65_RS06205	0.26	+0.2
1,284,563	-		DZA65_RS06205	0.26	+0.6
1,284,563	-		DZA65_RS06205	0.26	+0.0
1,284,569	+		DZA65_RS06205	0.26	+0.1
1,284,607	+		DZA65_RS06205	0.29	+0.8
1,284,608	-		DZA65_RS06205	0.29	-0.8
1,284,618	-		DZA65_RS06205	0.30	-0.6
1,284,618	-		DZA65_RS06205	0.30	+0.7
1,284,618	-		DZA65_RS06205	0.30	-1.0
1,284,618	-		DZA65_RS06205	0.30	-0.8
1,284,618	-		DZA65_RS06205	0.30	-0.6
1,284,619	+		DZA65_RS06205	0.30	+0.4
1,284,619	+		DZA65_RS06205	0.30	-0.1
1,284,619	+		DZA65_RS06205	0.30	+0.3
1,284,619	+		DZA65_RS06205	0.30	-0.6
1,284,620	-		DZA65_RS06205	0.30	+0.2
1,284,620	-		DZA65_RS06205	0.30	+0.4
1,284,629	+		DZA65_RS06205	0.30	+0.4
1,284,629	+		DZA65_RS06205	0.30	-0.2
1,284,630	-		DZA65_RS06205	0.30	+1.0
1,284,652	+		DZA65_RS06205	0.32	-0.2
1,284,702	+		DZA65_RS06205	0.35	-0.6
1,284,702	+		DZA65_RS06205	0.35	+3.0
1,284,703	-		DZA65_RS06205	0.35	+1.1
1,284,727	-		DZA65_RS06205	0.36	+0.8
1,284,730	-		DZA65_RS06205	0.37	-2.9
1,284,758	+		DZA65_RS06205	0.38	-0.0
1,284,758	+		DZA65_RS06205	0.38	-0.6
1,284,759	-		DZA65_RS06205	0.38	-0.2
1,284,759	-		DZA65_RS06205	0.38	-1.6
1,284,775	+		DZA65_RS06205	0.39	-0.6
1,284,846	+		DZA65_RS06205	0.44	-0.2
1,284,940	+		DZA65_RS06205	0.50	-0.8
1,284,940	+		DZA65_RS06205	0.50	+1.8
1,284,940	+		DZA65_RS06205	0.50	-0.8
1,284,961	+		DZA65_RS06205	0.51	-0.6
1,284,985	+		DZA65_RS06205	0.53	-0.5
1,284,986	-		DZA65_RS06205	0.53	-1.2
1,284,986	-		DZA65_RS06205	0.53	-0.5
1,285,057	+		DZA65_RS06205	0.57	-1.3
1,285,057	+		DZA65_RS06205	0.57	-1.0
1,285,057	+		DZA65_RS06205	0.57	+0.7
1,285,057	+		DZA65_RS06205	0.57	+1.2
1,285,058	-		DZA65_RS06205	0.57	-0.8
1,285,058	-		DZA65_RS06205	0.57	-2.3
1,285,141	-		DZA65_RS06205	0.63	-0.2
1,285,141	-		DZA65_RS06205	0.63	-0.9
1,285,175	-		DZA65_RS06205	0.65	-0.1
1,285,180	+		DZA65_RS06205	0.65	-0.9
1,285,192	+		DZA65_RS06205	0.66	-0.0
1,285,192	+		DZA65_RS06205	0.66	-1.5
1,285,192	+		DZA65_RS06205	0.66	+1.5
1,285,192	+		DZA65_RS06205	0.66	-0.6
1,285,193	-		DZA65_RS06205	0.66	-1.2
1,285,243	+		DZA65_RS06205	0.69	-2.1
1,285,244	-		DZA65_RS06205	0.69	+0.2
1,285,244	-				+1.0
1,285,383	+		DZA65_RS06205	0.78	-0.3
1,285,395	+		DZA65_RS06205	0.79	+0.7
1,285,396	-		DZA65_RS06205	0.79	-0.1
1,285,396	-		DZA65_RS06205	0.79	+0.4
1,285,420	+		DZA65_RS06205	0.80	-0.3
1,285,421	-		DZA65_RS06205	0.80	+0.0
1,285,421	-		DZA65_RS06205	0.80	-0.3
1,285,421	-		DZA65_RS06205	0.80	-0.3
1,285,421	-		DZA65_RS06205	0.80	+0.1
1,285,421	-		DZA65_RS06205	0.80	-0.8
1,285,421	-		DZA65_RS06205	0.80	-0.3
1,285,421	-		DZA65_RS06205	0.80	+1.0
1,285,480	-		DZA65_RS06205	0.84	+1.4
1,285,495	+		DZA65_RS06205	0.85	-0.1
1,285,495	+		DZA65_RS06205	0.85	+0.7
1,285,498	+		DZA65_RS06205	0.85	+1.2
1,285,499	-		DZA65_RS06205	0.85	-0.3
1,285,543	+		DZA65_RS06205	0.88	-0.5
1,285,543	+		DZA65_RS06205	0.88	+1.2
1,285,544	-		DZA65_RS06205	0.88	-1.2
1,285,547	+		DZA65_RS06205	0.88	+1.0
1,285,547	+		DZA65_RS06205	0.88	-0.7
1,285,547	+		DZA65_RS06205	0.88	-0.8
1,285,547	+		DZA65_RS06205	0.88	+0.8
1,285,547	+		DZA65_RS06205	0.88	-1.2
1,285,547	+		DZA65_RS06205	0.88	-1.0
1,285,547	+		DZA65_RS06205	0.88	-0.9
1,285,547	+		DZA65_RS06205	0.88	+1.4
1,285,547	+		DZA65_RS06205	0.88	-0.8
1,285,548	-		DZA65_RS06205	0.88	-1.6
1,285,548	-		DZA65_RS06205	0.88	-1.6
1,285,548	-		DZA65_RS06205	0.88	-0.1
1,285,548	-		DZA65_RS06205	0.88	-2.4
1,285,548	-		DZA65_RS06205	0.88	-1.6
1,285,548	-		DZA65_RS06205	0.88	-1.6
1,285,550	-		DZA65_RS06205	0.88	-0.6
1,285,594	+				+0.2
1,285,594	+				+0.6
1,285,595	-				+0.5
1,285,595	-				-1.6
1,285,641	+				+1.8
1,285,642	-				+0.1
1,285,642	-				-0.4
1,285,642	-				+0.4
1,285,673	+				+0.2
1,285,673	+				+1.5
1,285,678	+				+0.4
1,285,678	+				-0.1
1,285,678	+				+0.7
1,285,678	+				+0.8
1,285,679	-				-2.1
1,285,681	+				-0.6
1,285,726	+				+0.1
1,285,733	+				-2.2
1,285,734	-				-0.3
1,285,736	+				+0.2
1,285,739	+				-1.2
1,285,740	-				+0.7
1,285,740	-				-0.8
1,285,774	-				-1.1
1,285,789	+				-1.5
1,286,007	+				+0.9
1,286,014	-				+0.6
1,286,014	-				-1.2
1,286,022	-				-1.9
1,286,102	+				-0.1
1,286,102	+				+0.0
1,286,103	-				+0.9
1,286,103	-				-0.3
1,286,106	+				+1.4
1,286,106	+				-0.2
1,286,106	+				+0.5
1,286,106	+				-0.9
1,286,107	-				-0.7
1,286,154	-		DZA65_RS06210	0.11	-0.5
1,286,157	+		DZA65_RS06210	0.11	+0.2
1,286,157	+		DZA65_RS06210	0.11	-1.3
1,286,158	-		DZA65_RS06210	0.11	-1.2
1,286,158	-		DZA65_RS06210	0.11	+2.2
1,286,158	-		DZA65_RS06210	0.11	-0.4
1,286,158	-		DZA65_RS06210	0.11	-0.1
1,286,233	+		DZA65_RS06210	0.16	-1.2
1,286,233	+		DZA65_RS06210	0.16	-0.1
1,286,233	+		DZA65_RS06210	0.16	-1.5
1,286,233	+		DZA65_RS06210	0.16	-0.5
1,286,233	+		DZA65_RS06210	0.16	+1.5
1,286,234	-		DZA65_RS06210	0.16	-0.9
1,286,234	-		DZA65_RS06210	0.16	+0.4
1,286,234	-		DZA65_RS06210	0.16	-0.6
1,286,298	-		DZA65_RS06210	0.21	+1.0
1,286,323	+		DZA65_RS06210	0.23	+0.2
1,286,323	+		DZA65_RS06210	0.23	-0.4
1,286,340	+		DZA65_RS06210	0.24	-1.1
1,286,340	+		DZA65_RS06210	0.24	+2.2
1,286,341	-		DZA65_RS06210	0.24	+1.1
1,286,521	+		DZA65_RS06210	0.37	-1.2
1,286,521	+		DZA65_RS06210	0.37	+1.1
1,286,543	+				-0.2
1,286,543	+		DZA65_RS06210	0.39	+2.4
1,286,543	+		DZA65_RS06210	0.39	+0.6
1,286,544	-		DZA65_RS06210	0.39	+0.6
1,286,544	-		DZA65_RS06210	0.39	-0.6
1,286,568	+		DZA65_RS06210	0.41	+0.1
1,286,568	+		DZA65_RS06210	0.41	+0.9
1,286,569	-				+1.6
1,286,569	-		DZA65_RS06210	0.41	+0.4
1,286,599	+		DZA65_RS06210	0.43	+0.2
1,286,600	-		DZA65_RS06210	0.43	-0.2
1,286,631	+		DZA65_RS06210	0.45	+0.4
1,286,631	+		DZA65_RS06210	0.45	+1.6
1,286,631	+		DZA65_RS06210	0.45	+0.8
1,286,632	-		DZA65_RS06210	0.45	-0.2
1,286,632	-		DZA65_RS06210	0.45	+0.5
1,286,632	-		DZA65_RS06210	0.45	-0.3
1,286,632	-		DZA65_RS06210	0.45	-0.1
1,286,632	-		DZA65_RS06210	0.45	+0.6
1,286,635	-		DZA65_RS06210	0.46	-1.2
1,286,635	-		DZA65_RS06210	0.46	+1.4
1,286,658	+		DZA65_RS06210	0.47	-0.8
1,286,691	+		DZA65_RS06210	0.50	-0.3
1,286,700	+		DZA65_RS06210	0.50	-1.3
1,286,701	-		DZA65_RS06210	0.50	-0.6