Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05985

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,232,986	+		DZA65_RS05980	0.51	+1.4
1,233,002	+		DZA65_RS05980	0.52	-1.6
1,233,061	-		DZA65_RS05980	0.55	+0.3
1,233,064	+		DZA65_RS05980	0.55	+2.0
1,233,064	+		DZA65_RS05980	0.55	-0.6
1,233,091	-		DZA65_RS05980	0.57	-0.3
1,233,091	-		DZA65_RS05980	0.57	+0.8
1,233,129	+		DZA65_RS05980	0.59	+1.0
1,233,129	+		DZA65_RS05980	0.59	-1.0
1,233,129	+		DZA65_RS05980	0.59	-0.6
1,233,130	-		DZA65_RS05980	0.59	-0.7
1,233,151	+		DZA65_RS05980	0.60	-1.0
1,233,242	+		DZA65_RS05980	0.64	+0.8
1,233,242	+		DZA65_RS05980	0.64	-2.6
1,233,242	+		DZA65_RS05980	0.64	-0.7
1,233,244	+		DZA65_RS05980	0.64	+1.2
1,233,245	-		DZA65_RS05980	0.64	-0.8
1,233,250	+		DZA65_RS05980	0.65	-2.2
1,233,250	+		DZA65_RS05980	0.65	+0.4
1,233,349	+		DZA65_RS05980	0.70	-0.6
1,233,353	-		DZA65_RS05980	0.70	-2.4
1,233,387	+		DZA65_RS05980	0.72	-2.8
1,233,388	-		DZA65_RS05980	0.72	-1.1
1,233,393	-		DZA65_RS05980	0.72	-0.4
1,233,411	+		DZA65_RS05980	0.73	-0.2
1,233,411	+		DZA65_RS05980	0.73	-1.9
1,233,412	-		DZA65_RS05980	0.73	-1.2
1,233,766	+				-0.6
1,233,771	+				-0.3
1,233,771	+				-1.4
1,233,771	+				-1.2
1,233,771	+				-0.1
1,233,772	-				-0.4
1,233,772	-				-1.7
1,233,843	+				-0.6
1,233,843	+				-0.6
1,233,843	+				-0.7
1,233,844	-				-0.3
1,233,875	+				-0.7
1,233,939	-				-1.7
1,234,127	-		DZA65_RS05985	0.16	+0.2
1,234,127	-		DZA65_RS05985	0.16	+0.7
1,234,129	+		DZA65_RS05985	0.17	+0.2
1,234,145	-		DZA65_RS05985	0.18	-0.6
1,234,185	-		DZA65_RS05985	0.22	-1.6
1,234,209	+		DZA65_RS05985	0.25	-1.1
1,234,210	-		DZA65_RS05985	0.25	-0.2
1,234,210	-		DZA65_RS05985	0.25	-0.3
1,234,372	+		DZA65_RS05985	0.42	+0.8
1,234,372	+		DZA65_RS05985	0.42	-0.4
1,234,372	+		DZA65_RS05985	0.42	-0.9
1,234,373	-				-1.9
1,234,397	+		DZA65_RS05985	0.45	-0.7
1,234,397	+		DZA65_RS05985	0.45	-1.6
1,234,428	-		DZA65_RS05985	0.48	-0.8
1,234,593	-		DZA65_RS05985	0.65	-2.3
1,234,626	-		DZA65_RS05985	0.69	-1.4
1,234,635	-		DZA65_RS05985	0.70	-1.2
1,234,878	+				-0.3
1,234,902	-				+0.2
1,234,937	+				-0.6
1,234,948	+				+0.4
1,234,948	+				-1.5
1,234,998	-				+0.4
1,235,008	-				+0.6
1,235,008	-				-0.5
1,235,008	-				-0.8
1,235,030	+				+1.0
1,235,116	+				-0.2
1,235,117	-				+0.0
1,235,117	-				+0.7
1,235,117	-				+0.5
1,235,137	+				+0.0
1,235,143	+				-0.0
1,235,144	-				+0.4
1,235,144	-				-0.4
1,235,154	-				+0.6
1,235,156	+				-0.6
1,235,156	+				-0.2
1,235,156	+				+1.0
1,235,157	-				+0.6
1,235,157	-				-0.6
1,235,204	-				-0.6
1,235,222	+				+0.1
1,235,223	-				+0.6
1,235,231	+				-0.2
1,235,231	+				+0.6
1,235,239	+				-0.5
1,235,239	+				-0.8
1,235,239	+				+0.0
1,235,239	+				-0.6
1,235,240	-				+0.3
1,235,240	-				+0.8
1,235,240	-				+0.9
1,235,240	-				-0.2
1,235,240	-				+1.2
1,235,281	+				+0.2
1,235,284	+				+1.1
1,235,289	+				-1.8
1,235,290	-				-0.2
1,235,296	-				+0.2
1,235,299	+				-0.2
1,235,299	+				-0.3
1,235,300	-				+0.2
1,235,300	-				-0.1
1,235,308	+				+0.3
1,235,318	-				-0.4
1,235,334	+				-1.9
1,235,334	+				-1.0
1,235,334	+				-1.0
1,235,334	+				-0.3
1,235,334	+				-2.2
1,235,334	+				-1.6
1,235,334	+				-1.3
1,235,335	-				+1.8
1,235,335	-				-0.1
1,235,335	-				-2.0
1,235,335	-				-0.3
1,235,335	-				-2.2
1,235,335	-				-0.7
1,235,357	+				-0.2
1,235,357	+				+0.5
1,235,379	-				+0.8
1,235,379	-				+0.5
1,235,379	-				-0.0
1,235,379	-				+0.8
1,235,398	+				-0.4
1,235,398	+				+0.6
1,235,398	+				-2.2
1,235,398	+				+0.3
1,235,399	-				+0.3
1,235,399	-				+0.1
1,235,399	-				+1.2
1,235,399	-				+0.4
1,235,399	-				+1.4
1,235,419	+				-1.9
1,235,419	+				-0.7
1,235,420	-				+0.7
1,235,420	-				-0.1
1,235,421	+				+0.6
1,235,421	+				-0.6
1,235,550	+		DZA65_RS05990	0.13	-0.0
1,235,550	+		DZA65_RS05990	0.13	-0.7
1,235,551	-		DZA65_RS05990	0.13	-1.1
1,235,551	-		DZA65_RS05990	0.13	-0.4
1,235,552	+		DZA65_RS05990	0.13	-0.4
1,235,552	+		DZA65_RS05990	0.13	-1.3
1,235,552	+		DZA65_RS05990	0.13	-0.2
1,235,552	+		DZA65_RS05990	0.13	-0.6
1,235,552	+		DZA65_RS05990	0.13	+0.6
1,235,553	-				-0.3
1,235,672	+		DZA65_RS05990	0.21	-0.0
1,235,673	-		DZA65_RS05990	0.22	-0.1
1,235,690	+		DZA65_RS05990	0.23	-0.9
1,235,691	-		DZA65_RS05990	0.23	-0.0
1,235,691	-		DZA65_RS05990	0.23	-0.3
1,235,727	-		DZA65_RS05990	0.25	-0.4
1,235,806	+		DZA65_RS05990	0.31	-1.6
1,235,874	+		DZA65_RS05990	0.35	+0.7
1,235,874	+		DZA65_RS05990	0.35	-0.7
1,235,874	+		DZA65_RS05990	0.35	-0.9
1,235,874	+		DZA65_RS05990	0.35	-0.6
1,235,874	+		DZA65_RS05990	0.35	+0.8
1,235,875	-		DZA65_RS05990	0.35	-1.0
1,235,875	-		DZA65_RS05990	0.35	-1.6
1,235,875	-		DZA65_RS05990	0.35	-0.2
1,235,878	+		DZA65_RS05990	0.36	+0.7
1,235,878	+		DZA65_RS05990	0.36	+0.8
1,235,878	+		DZA65_RS05990	0.36	-1.6
1,235,878	+		DZA65_RS05990	0.36	-1.8
1,235,878	+		DZA65_RS05990	0.36	+0.7
1,235,878	+		DZA65_RS05990	0.36	-1.2
1,235,878	+		DZA65_RS05990	0.36	-0.0
1,235,878	+		DZA65_RS05990	0.36	+0.4
1,235,878	+		DZA65_RS05990	0.36	+0.0
1,235,878	+				+1.1
1,235,878	+		DZA65_RS05990	0.36	+0.8
1,235,878	+		DZA65_RS05990	0.36	-1.0
1,235,878	+		DZA65_RS05990	0.36	+0.3
1,235,878	+		DZA65_RS05990	0.36	-1.3
1,235,879	-		DZA65_RS05990	0.36	-0.9
1,235,879	-		DZA65_RS05990	0.36	-1.2
1,235,879	-		DZA65_RS05990	0.36	-0.6
1,235,879	-		DZA65_RS05990	0.36	-0.6
1,235,879	-		DZA65_RS05990	0.36	-1.6
1,235,879	-		DZA65_RS05990	0.36	-1.9
1,235,910	-		DZA65_RS05990	0.38	+0.2