Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05975

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,230,377	+		DZA65_RS05965	0.29	-3.4
1,230,377	+		DZA65_RS05965	0.29	-1.1
1,230,378	-		DZA65_RS05965	0.29	-0.8
1,230,378	-		DZA65_RS05965	0.29	+0.4
1,230,378	-		DZA65_RS05965	0.29	+1.7
1,230,384	+		DZA65_RS05965	0.30	-0.6
1,230,387	+		DZA65_RS05965	0.30	-0.6
1,230,449	+		DZA65_RS05965	0.37	-3.1
1,230,632	+		DZA65_RS05965	0.58	-1.2
1,230,707	+		DZA65_RS05965	0.66	-1.0
1,230,708	-		DZA65_RS05965	0.66	+0.1
1,230,708	-		DZA65_RS05965	0.66	-0.4
1,230,708	-		DZA65_RS05965	0.66	-1.9
1,230,747	-		DZA65_RS05965	0.71	-0.0
1,230,898	+		DZA65_RS05965	0.88	+0.4
1,230,996	-				-0.8
1,231,003	-				-0.6
1,231,014	-				+0.4
1,231,014	-				-0.9
1,231,014	-				-1.6
1,231,148	-		DZA65_RS05970	0.37	-1.2
1,231,148	-		DZA65_RS05970	0.37	-0.6
1,231,165	-		DZA65_RS05970	0.42	-0.6
1,231,302	+		DZA65_RS05970	0.83	-0.9
1,231,358	+				-1.6
1,231,358	+				-0.7
1,231,358	+				-2.0
1,231,619	+		DZA65_RS05975	0.43	-0.9
1,231,724	+		DZA65_RS05975	0.60	-0.4
1,231,732	-		DZA65_RS05975	0.61	-0.6
1,231,735	-		DZA65_RS05975	0.61	-2.2
1,231,832	+		DZA65_RS05975	0.77	-1.2
1,231,941	+				+1.1
1,231,942	-				+2.2
1,231,942	-				-1.1
1,231,942	-				+0.2
1,231,959	+				-0.6
1,232,032	+				-1.6
1,232,043	+				-0.7
1,232,043	+				+0.0
1,232,043	+				-0.2
1,232,044	-				-0.3
1,232,044	-				+0.4
1,232,044	-				-2.9
1,232,044	-				-1.6
1,232,044	-				-1.5
1,232,044	-				-1.2
1,232,047	-				-1.4
1,232,128	-				-0.0
1,232,151	-				-1.1
1,232,200	+		DZA65_RS05980	0.12	-0.0
1,232,215	-		DZA65_RS05980	0.13	-1.8
1,232,535	-		DZA65_RS05980	0.29	+0.3
1,232,539	-		DZA65_RS05980	0.29	+0.1
1,232,726	+		DZA65_RS05980	0.38	-1.9
1,232,768	-		DZA65_RS05980	0.41	-0.2
1,232,841	+		DZA65_RS05980	0.44	+0.4
1,232,841	+		DZA65_RS05980	0.44	-0.4
1,232,841	+		DZA65_RS05980	0.44	-0.9
1,232,842	-		DZA65_RS05980	0.44	+0.8
1,232,890	+		DZA65_RS05980	0.47	-0.1
1,232,891	-		DZA65_RS05980	0.47	-2.2
1,232,891	-		DZA65_RS05980	0.47	-1.6
1,232,891	-		DZA65_RS05980	0.47	-0.0
1,232,891	-				-0.6
1,232,903	+		DZA65_RS05980	0.47	-2.9