Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05930

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,222,506	-				+0.8
1,222,506	-				+0.4
1,222,506	-				-1.2
1,222,570	-				-1.5
1,222,570	-				-1.2
1,222,570	-				+0.7
1,222,578	-				+0.8
1,222,600	-				-0.6
1,222,608	-				+0.8
1,222,608	-				-0.3
1,222,608	-				-0.2
1,222,610	-				-0.9
1,222,610	-				-0.6
1,222,610	-				+0.5
1,222,610	-				-1.2
1,222,628	+				+0.7
1,222,629	-				+1.0
1,222,629	-				-0.8
1,222,671	+				-1.9
1,222,671	+				-1.0
1,222,671	+				-0.0
1,222,671	+				-0.9
1,222,672	-				-0.1
1,222,672	-				+1.4
1,222,672	-				-0.2
1,222,672	-				-0.1
1,222,672	-				-1.3
1,222,672	-				-0.8
1,222,672	-				+0.7
1,222,675	+				+0.1
1,222,683	+				-0.6
1,222,694	+				+0.4
1,222,695	-				-0.0
1,222,695	-				+0.8
1,222,740	+				-0.1
1,222,741	-				+0.8
1,222,741	-				-0.0
1,222,741	-				-0.6
1,222,792	-				-0.1
1,222,834	+				+0.3
1,222,872	+		DZA65_RS05930	0.10	-1.9
1,222,873	-		DZA65_RS05930	0.10	-0.5
1,222,972	-		DZA65_RS05930	0.17	-0.9
1,222,972	-		DZA65_RS05930	0.17	-1.6
1,222,972	-		DZA65_RS05930	0.17	-1.4
1,222,972	-		DZA65_RS05930	0.17	-2.6
1,222,975	+		DZA65_RS05930	0.17	+0.2
1,222,976	-		DZA65_RS05930	0.17	-0.4
1,222,992	+		DZA65_RS05930	0.18	-2.9
1,223,308	+		DZA65_RS05930	0.40	+0.1
1,223,309	-		DZA65_RS05930	0.40	-0.9
1,223,309	-		DZA65_RS05930	0.40	+0.7
1,223,309	-		DZA65_RS05930	0.40	-2.8
1,223,309	-		DZA65_RS05930	0.40	-0.6
1,223,341	+		DZA65_RS05930	0.42	-1.9
1,223,341	+		DZA65_RS05930	0.42	+0.1
1,223,341	+		DZA65_RS05930	0.42	-0.2
1,223,342	-		DZA65_RS05930	0.43	-0.3
1,223,342	-		DZA65_RS05930	0.43	+0.0
1,223,342	-		DZA65_RS05930	0.43	-1.1
1,223,342	-		DZA65_RS05930	0.43	-1.5
1,223,384	+		DZA65_RS05930	0.45	+0.4
1,223,385	-		DZA65_RS05930	0.45	+0.2
1,223,686	-		DZA65_RS05930	0.66	-0.1
1,224,034	+				+0.7
1,224,080	-				-1.9
1,224,127	+				-1.2
1,224,150	+				-2.6
1,224,164	-				+0.8
1,224,191	+				-2.2
1,224,191	+				+0.1
1,224,192	-				+0.6
1,224,192	-				+0.1
1,224,192	-				-0.0
1,224,192	-				-1.2
1,224,257	-				-0.3
1,224,259	+				+1.0
1,224,259	+				+0.4
1,224,259	+				-0.6
1,224,259	+				-0.8
1,224,259	+				-1.5
1,224,260	-				+1.2
1,224,260	-				+0.0
1,224,260	-				-0.5
1,224,260	-				+0.4
1,224,260	-				-2.2
1,224,260	-				-0.3
1,224,260	-				+0.7
1,224,260	-				-0.4
1,224,260	-				-0.2
1,224,265	+				-0.9
1,224,265	+				+0.5
1,224,265	+				-0.1
1,224,265	+				-2.1
1,224,265	+				+0.6
1,224,265	+				+1.2
1,224,265	+				-0.7
1,224,266	-				-2.4
1,224,266	-				-2.2
1,224,266	-				-0.2
1,224,266	-				-0.1
1,224,266	-				-0.2
1,224,266	-				-0.2
1,224,266	-				-1.2
1,224,269	+				+0.4
1,224,269	+				+1.3
1,224,270	-				+0.6
1,224,470	+		DZA65_RS05935	0.38	-0.2
1,224,471	-		DZA65_RS05935	0.39	-0.2
1,224,471	-		DZA65_RS05935	0.39	+0.9
1,224,471	-		DZA65_RS05935	0.39	-0.8
1,224,487	-		DZA65_RS05935	0.41	-1.0
1,224,687	+		DZA65_RS05935	0.74	-0.1
1,224,839	+				+0.7
1,224,839	+				+0.8
1,224,859	-				+0.2
1,224,861	+				+0.4
1,224,861	+				+0.5
1,224,861	+				+0.2
1,224,861	+				-0.1
1,224,861	+				+0.3
1,224,862	-				+0.1
1,224,862	-				+0.3
1,224,862	-				-1.5
1,224,862	-				-0.1
1,224,862	-				-1.9
1,224,862	-				-0.2
1,224,862	-				-0.1
1,224,862	-				-0.3
1,224,863	+				+0.4
1,224,864	-				-0.0
1,224,864	-				+0.5
1,224,864	-				-0.2
1,224,864	-				-0.1
1,224,927	-		DZA65_RS05940	0.14	+0.8
1,224,936	+		DZA65_RS05940	0.15	-0.3
1,224,936	+		DZA65_RS05940	0.15	+0.7
1,224,936	+		DZA65_RS05940	0.15	-0.8
1,224,936	+		DZA65_RS05940	0.15	+1.2
1,224,936	+		DZA65_RS05940	0.15	+0.6
1,224,936	+		DZA65_RS05940	0.15	+1.3
1,224,937	-		DZA65_RS05940	0.15	+0.7
1,224,937	-		DZA65_RS05940	0.15	-0.8
1,224,937	-		DZA65_RS05940	0.15	-0.3
1,224,937	-		DZA65_RS05940	0.15	+0.4
1,224,937	-		DZA65_RS05940	0.15	+1.4
1,224,938	+		DZA65_RS05940	0.15	+0.1
1,224,938	+		DZA65_RS05940	0.15	-0.4
1,224,938	+		DZA65_RS05940	0.15	-0.2
1,224,938	+		DZA65_RS05940	0.15	-0.8
1,224,938	+		DZA65_RS05940	0.15	+1.8
1,224,938	+		DZA65_RS05940	0.15	+0.2
1,224,938	+		DZA65_RS05940	0.15	+0.9
1,224,938	+		DZA65_RS05940	0.15	-1.2
1,224,938	+		DZA65_RS05940	0.15	-0.2
1,224,939	-		DZA65_RS05940	0.15	-1.0
1,224,939	-		DZA65_RS05940	0.15	-0.3
1,224,939	-		DZA65_RS05940	0.15	+0.1
1,224,939	-		DZA65_RS05940	0.15	-0.4
1,224,991	-		DZA65_RS05940	0.21	-0.5
1,225,025	+		DZA65_RS05940	0.24	-0.5
1,225,025	+		DZA65_RS05940	0.24	-0.6
1,225,025	+		DZA65_RS05940	0.24	+0.8
1,225,025	+		DZA65_RS05940	0.24	-1.4
1,225,025	+		DZA65_RS05940	0.24	+0.2
1,225,025	+		DZA65_RS05940	0.24	-0.9
1,225,025	+		DZA65_RS05940	0.24	+0.9
1,225,025	+		DZA65_RS05940	0.24	-1.5
1,225,026	-		DZA65_RS05940	0.24	-1.3
1,225,026	-		DZA65_RS05940	0.24	-1.6
1,225,026	-		DZA65_RS05940	0.24	+0.9
1,225,026	-		DZA65_RS05940	0.24	-0.2
1,225,026	-		DZA65_RS05940	0.24	-1.5
1,225,026	-		DZA65_RS05940	0.24	-0.5
1,225,026	-		DZA65_RS05940	0.24	+0.1
1,225,026	-		DZA65_RS05940	0.24	+1.6
1,225,026	-		DZA65_RS05940	0.24	+0.5
1,225,026	-		DZA65_RS05940	0.24	-0.3
1,225,050	+		DZA65_RS05940	0.27	+0.1
1,225,164	+		DZA65_RS05940	0.39	-0.2
1,225,164	+		DZA65_RS05940	0.39	+0.4