Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS04215

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
880,367	+		DZA65_RS04205	0.41	+0.5
880,367	+		DZA65_RS04205	0.41	-0.9
880,368	-		DZA65_RS04205	0.41	-1.9
880,384	+		DZA65_RS04205	0.44	-0.0
880,516	+		DZA65_RS04205	0.70	+0.2
880,517	-		DZA65_RS04205	0.70	-0.1
880,519	-		DZA65_RS04205	0.71	-0.2
880,535	-		DZA65_RS04205	0.74	+1.0
880,578	+		DZA65_RS04205	0.83	+1.1
880,579	-		DZA65_RS04205	0.83	+0.9
880,579	-		DZA65_RS04205	0.83	-0.2
880,581	+		DZA65_RS04205	0.83	-0.1
880,581	+		DZA65_RS04205	0.83	+0.1
880,581	+		DZA65_RS04205	0.83	+1.0
880,582	-		DZA65_RS04205	0.83	-0.6
880,627	+				+0.4
880,627	+				-0.6
880,628	-				-0.5
880,628	-				-0.3
880,628	-				+0.4
880,628	-				-1.2
880,628	-				-1.2
880,628	-				+0.0
880,638	+				-1.3
880,677	+				-1.6
880,678	-				-1.0
880,678	-				+0.2
880,695	+				+0.3
880,695	+				+0.3
880,696	-				-0.1
880,699	+				-0.5
880,699	+				+0.5
880,699	+				-1.6
880,699	+				+0.0
880,699	+				-0.4
880,699	+				+0.2
880,700	-				+1.9
880,700	-				-0.3
880,700	-				+0.3
880,700	-				-0.6
880,703	-				+0.3
880,725	-				-0.8
880,742	+				-1.1
880,742	+				-0.9
880,743	-				+0.8
880,818	+				+0.4
880,877	-				-0.6
880,885	-				-0.6
880,896	+				-0.2
880,897	-				-1.9
881,219	-				-0.6
881,220	+				+0.2
881,220	+				-1.2
881,221	-				-2.3
881,239	+				+1.4
881,240	-				+0.6
881,244	+				-0.3
881,245	-				-0.3
881,245	-				-0.6
881,245	-				-0.9
881,245	-				+0.5
881,245	-				+0.7
881,410	+		DZA65_RS04215	0.33	-1.0
881,410	+		DZA65_RS04215	0.33	+0.7
881,411	-		DZA65_RS04215	0.33	-2.2
881,471	+		DZA65_RS04215	0.45	-1.6
881,572	+		DZA65_RS04215	0.66	+1.4
881,572	+		DZA65_RS04215	0.66	-0.7
881,573	-		DZA65_RS04215	0.66	-0.3
881,573	-		DZA65_RS04215	0.66	+0.7
881,666	-		DZA65_RS04215	0.86	-1.4
881,666	-		DZA65_RS04215	0.86	-1.9
881,666	-		DZA65_RS04215	0.86	-0.6
881,714	+				-0.9
881,747	+				-0.1
881,748	-				-0.1
881,748	-				-0.8
881,748	-				-0.4
881,748	-				+0.4
881,749	+				+0.4
881,749	+				-1.4
881,750	-				+0.6
881,750	-				+0.5
881,791	-				-0.2
881,791	-				+0.1
881,854	+				-0.3
881,857	+				+0.3
881,857	+				+1.2
881,857	+				+1.6
881,858	-				-0.2
881,858	-				-2.6
881,858	-				-0.9
881,858	-				-2.6
881,872	-				-0.4
881,890	+				-1.0
881,891	-				-2.4
881,943	-		DZA65_RS04220	0.12	-1.7
881,945	-		DZA65_RS04220	0.12	+1.0
881,945	-		DZA65_RS04220	0.12	-1.9
881,945	-				+2.0
882,089	-		DZA65_RS04220	0.46	-0.2
882,109	+		DZA65_RS04220	0.50	+0.2
882,167	-		DZA65_RS04220	0.63	-0.4
882,190	+		DZA65_RS04220	0.69	-0.1
882,190	+		DZA65_RS04220	0.69	-1.7
882,190	+		DZA65_RS04220	0.69	-1.7
882,190	+		DZA65_RS04220	0.69	-0.8
882,191	-		DZA65_RS04220	0.69	-1.4
882,191	-		DZA65_RS04220	0.69	-1.0
882,191	-		DZA65_RS04220	0.69	-1.4
882,277	+		DZA65_RS04220	0.89	-0.6
882,277	+		DZA65_RS04220	0.89	-0.5
882,314	+				-1.6
882,314	+				+1.8
882,314	+				-0.6
882,315	-				+0.4
882,315	-				+0.1
882,346	-				-0.6
882,366	+				-0.6
882,367	-		DZA65_RS04225	0.17	-3.0
882,414	-		DZA65_RS04225	0.33	+1.1
882,508	+		DZA65_RS04225	0.65	-0.6
882,508	+		DZA65_RS04225	0.65	-1.0
882,508	+		DZA65_RS04225	0.65	+0.2
882,508	+		DZA65_RS04225	0.65	-1.2
882,508	+		DZA65_RS04225	0.65	+0.3
882,509	-		DZA65_RS04225	0.65	-0.0
882,509	-		DZA65_RS04225	0.65	-3.2
882,509	-		DZA65_RS04225	0.65	+0.1
882,560	+		DZA65_RS04225	0.82	-0.9
882,568	+		DZA65_RS04225	0.85	-0.7
882,569	-		DZA65_RS04225	0.85	+0.3
882,671	+				-0.3
882,671	+				+0.4
882,671	+				-1.0
882,671	+				+0.6
882,672	-				-0.2
882,672	-				+0.3
882,672	-				-1.6
882,672	-				-1.0
882,672	-				-0.7
882,672	-				-0.5