Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03660 and DZA65_RS03665 are separated by 248 nucleotides DZA65_RS03665 and DZA65_RS03670 are separated by 255 nucleotides DZA65_RS03670 and DZA65_RS03675 are separated by 806 nucleotides
DZA65_RS03660: DZA65_RS03660 - sugar ABC transporter permease, at 770,402 to 771,292
_RS03660
DZA65_RS03665: DZA65_RS03665 - TOBE domain-containing protein, at 771,541 to 771,969
_RS03665
DZA65_RS03670: DZA65_RS03670 - kdo(2)-lipid IV(A) palmitoleoyltransferase, at 772,225 to 773,145
_RS03670
DZA65_RS03675: DZA65_RS03675 - NCS2 family permease, at 773,952 to 775,319
_RS03675
Position (kb) 772
773
774 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 771.225 kb on + strand at 771.225 kb on + strand at 771.298 kb on + strand at 771.298 kb on + strand at 771.298 kb on + strand at 771.330 kb on - strand at 771.342 kb on - strand at 771.342 kb on - strand at 771.342 kb on - strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.355 kb on + strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.356 kb on - strand at 771.371 kb on + strand at 771.371 kb on + strand at 771.372 kb on - strand at 771.421 kb on + strand at 771.422 kb on - strand at 771.422 kb on - strand at 771.426 kb on + strand at 771.426 kb on + strand at 771.448 kb on + strand at 771.449 kb on - strand at 771.449 kb on - strand at 771.492 kb on - strand at 771.492 kb on - strand at 771.493 kb on + strand at 771.493 kb on + strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.494 kb on - strand at 771.497 kb on + strand at 771.497 kb on + strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.498 kb on - strand at 771.511 kb on - strand at 771.526 kb on + strand at 771.527 kb on - strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.540 kb on + strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.541 kb on - strand at 771.620 kb on + strand at 771.648 kb on + strand, within DZA65_RS03665 at 771.834 kb on + strand, within DZA65_RS03665 at 771.835 kb on - strand, within DZA65_RS03665 at 771.835 kb on - strand, within DZA65_RS03665 at 771.887 kb on + strand, within DZA65_RS03665 at 771.888 kb on - strand, within DZA65_RS03665 at 772.008 kb on + strand at 772.008 kb on + strand at 772.009 kb on - strand at 772.009 kb on - strand at 772.096 kb on + strand at 772.096 kb on + strand at 772.097 kb on - strand at 772.097 kb on - strand at 772.180 kb on + strand at 772.180 kb on + strand at 772.180 kb on + strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.181 kb on - strand at 772.188 kb on + strand at 772.370 kb on - strand, within DZA65_RS03670 at 772.550 kb on + strand, within DZA65_RS03670 at 772.620 kb on + strand, within DZA65_RS03670 at 772.620 kb on + strand, within DZA65_RS03670 at 772.621 kb on - strand, within DZA65_RS03670 at 772.621 kb on - strand, within DZA65_RS03670 at 772.695 kb on + strand, within DZA65_RS03670 at 772.695 kb on + strand, within DZA65_RS03670 at 772.696 kb on - strand, within DZA65_RS03670 at 772.899 kb on + strand, within DZA65_RS03670 at 772.970 kb on - strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.971 kb on + strand, within DZA65_RS03670 at 772.972 kb on - strand, within DZA65_RS03670 at 772.972 kb on - strand, within DZA65_RS03670 at 772.972 kb on - strand, within DZA65_RS03670 at 773.035 kb on + strand, within DZA65_RS03670 at 773.036 kb on - strand, within DZA65_RS03670 at 773.083 kb on + strand at 773.087 kb on + strand at 773.087 kb on + strand at 773.088 kb on - strand at 773.088 kb on - strand at 773.188 kb on + strand at 773.188 kb on + strand at 773.188 kb on + strand at 773.188 kb on + strand at 773.189 kb on - strand at 773.189 kb on - strand at 773.189 kb on - strand at 773.189 kb on - strand at 773.191 kb on + strand at 773.191 kb on + strand at 773.191 kb on + strand at 773.192 kb on - strand at 773.235 kb on + strand at 773.292 kb on + strand at 773.292 kb on + strand at 773.293 kb on - strand at 773.293 kb on - strand at 773.293 kb on - strand at 773.317 kb on + strand at 773.317 kb on + strand at 773.317 kb on + strand at 773.318 kb on - strand at 773.318 kb on - strand at 773.326 kb on + strand at 773.327 kb on - strand at 773.327 kb on - strand at 773.327 kb on - strand at 773.340 kb on - strand at 773.340 kb on - strand at 773.402 kb on + strand at 773.402 kb on + strand at 773.403 kb on - strand at 773.403 kb on - strand at 773.403 kb on - strand at 773.422 kb on + strand at 773.423 kb on - strand at 773.426 kb on + strand at 773.427 kb on - strand at 773.454 kb on + strand at 773.454 kb on + strand at 773.454 kb on + strand at 773.455 kb on - strand at 773.501 kb on + strand at 773.570 kb on - strand at 773.570 kb on - strand at 773.672 kb on + strand at 773.673 kb on - strand at 773.704 kb on + strand at 773.705 kb on - strand at 773.849 kb on - strand at 773.885 kb on - strand at 773.894 kb on + strand at 773.900 kb on + strand at 773.900 kb on + strand at 773.901 kb on - strand at 773.926 kb on - strand at 773.946 kb on + strand at 773.947 kb on - strand at 773.947 kb on - strand at 774.023 kb on + strand at 774.024 kb on - strand at 774.024 kb on - strand at 774.024 kb on - strand at 774.024 kb on - strand at 774.024 kb on - strand at 774.024 kb on - strand at 774.091 kb on - strand, within DZA65_RS03675 at 774.122 kb on + strand, within DZA65_RS03675 at 774.123 kb on - strand, within DZA65_RS03675
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 771,225 + +0.1 771,225 + -0.9 771,298 + -0.9 771,298 + -1.5 771,298 + +1.0 771,330 - +0.4 771,342 - +0.6 771,342 - +1.9 771,342 - -0.5 771,355 + -1.4 771,355 + -0.3 771,355 + +1.5 771,355 + -0.5 771,355 + +0.2 771,356 - -0.7 771,356 - -0.7 771,356 - +0.0 771,356 - -0.8 771,356 - -0.5 771,356 - -0.2 771,371 + +0.9 771,371 + -0.4 771,372 - -0.7 771,421 + -0.4 771,422 - -0.9 771,422 - -0.2 771,426 + +0.2 771,426 + -0.2 771,448 + -0.1 771,449 - -2.9 771,449 - -1.7 771,492 - +0.7 771,492 - +0.5 771,493 + +0.8 771,493 + +0.5 771,494 - -0.8 771,494 - -0.5 771,494 - -0.5 771,494 - -0.1 771,497 + +1.2 771,497 + +0.2 771,498 - +0.5 771,498 - -1.3 771,498 - -1.0 771,498 - -1.0 771,511 - -0.3 771,526 + +0.5 771,527 - +1.5 771,540 + -0.9 771,540 + +0.7 771,540 + -0.2 771,540 + +0.7 771,540 + -0.3 771,540 + -0.4 771,540 + -1.1 771,540 + +0.4 771,541 - +0.5 771,541 - +1.5 771,541 - +0.5 771,541 - -0.7 771,541 - -1.6 771,541 - -1.3 771,541 - +0.5 771,541 - +0.3 771,541 - -0.3 771,541 - +0.6 771,620 + +0.5 771,648 + DZA65_RS03665 0.25 +0.6 771,834 + DZA65_RS03665 0.68 -0.2 771,835 - DZA65_RS03665 0.69 +0.5 771,835 - DZA65_RS03665 0.69 -2.7 771,887 + DZA65_RS03665 0.81 -0.0 771,888 - DZA65_RS03665 0.81 -0.6 772,008 + +0.5 772,008 + +0.2 772,009 - -0.1 772,009 - -0.3 772,096 + -0.6 772,096 + -0.1 772,097 - -1.0 772,097 - -0.5 772,180 + -0.7 772,180 + +0.1 772,180 + +0.3 772,181 - +0.6 772,181 - +1.6 772,181 - -0.3 772,181 - +2.5 772,181 - -1.1 772,181 - -1.7 772,188 + -1.9 772,370 - DZA65_RS03670 0.16 -1.0 772,550 + DZA65_RS03670 0.35 +0.0 772,620 + DZA65_RS03670 0.43 +1.3 772,620 + DZA65_RS03670 0.43 -1.1 772,621 - DZA65_RS03670 0.43 +0.5 772,621 - DZA65_RS03670 0.43 +0.8 772,695 + DZA65_RS03670 0.51 -1.1 772,695 + DZA65_RS03670 0.51 -1.1 772,696 - DZA65_RS03670 0.51 -1.1 772,899 + DZA65_RS03670 0.73 -1.5 772,970 - DZA65_RS03670 0.81 -1.3 772,971 + DZA65_RS03670 0.81 -1.1 772,971 + DZA65_RS03670 0.81 -0.1 772,971 + DZA65_RS03670 0.81 -1.1 772,971 + DZA65_RS03670 0.81 +0.1 772,971 + DZA65_RS03670 0.81 -1.1 772,971 + DZA65_RS03670 0.81 +0.5 772,972 - DZA65_RS03670 0.81 -2.1 772,972 - DZA65_RS03670 0.81 -2.1 772,972 - DZA65_RS03670 0.81 -1.4 773,035 + DZA65_RS03670 0.88 -1.5 773,036 - DZA65_RS03670 0.88 -0.3 773,083 + +0.5 773,087 + -1.5 773,087 + -0.8 773,088 - -1.4 773,088 - +0.3 773,188 + -0.3 773,188 + +0.1 773,188 + +0.3 773,188 + +0.6 773,189 - +0.3 773,189 - -0.9 773,189 - +0.4 773,189 - -0.3 773,191 + +0.5 773,191 + -0.7 773,191 + -0.5 773,192 - -1.5 773,235 + +1.2 773,292 + -0.2 773,292 + +0.2 773,293 - +0.0 773,293 - -0.8 773,293 - +0.2 773,317 + -1.0 773,317 + -0.5 773,317 + +0.5 773,318 - +0.9 773,318 - -0.2 773,326 + +0.8 773,327 - -2.1 773,327 - +1.0 773,327 - -0.4 773,340 - +0.0 773,340 - +0.5 773,402 + +0.5 773,402 + -0.1 773,403 - -2.4 773,403 - +0.6 773,403 - -0.2 773,422 + -0.3 773,423 - +0.3 773,426 + +1.5 773,427 - -1.4 773,454 + +0.5 773,454 + -0.9 773,454 + -1.2 773,455 - +0.2 773,501 + +0.4 773,570 - -0.7 773,570 - -0.5 773,672 + +1.7 773,673 - +1.3 773,704 + -0.0 773,705 - -0.5 773,849 - -0.0 773,885 - +1.5 773,894 + -0.1 773,900 + +0.5 773,900 + -1.7 773,901 - -0.9 773,926 - -0.7 773,946 + +1.5 773,947 - +0.8 773,947 - -0.3 774,023 + +0.8 774,024 - -0.9 774,024 - +0.2 774,024 - -0.5 774,024 - -0.5 774,024 - +1.1 774,024 - -2.4 774,091 - DZA65_RS03675 0.10 -0.9 774,122 + DZA65_RS03675 0.12 -0.8 774,123 - DZA65_RS03675 0.12 +0.9
Or see this region's nucleotide sequence