Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00895 and DZA65_RS00900 are separated by 300 nucleotides DZA65_RS00900 and DZA65_RS00905 overlap by 20 nucleotides
DZA65_RS00895: DZA65_RS00895 - phosphoenolpyruvate carboxylase, at 200,126 to 202,765
_RS00895
DZA65_RS00900: DZA65_RS00900 - ATP-binding cassette domain-containing protein, at 203,066 to 205,195
_RS00900
DZA65_RS00905: DZA65_RS00905 - ThiF family adenylyltransferase, at 205,176 to 206,270
_RS00905
Position (kb) 203
204
205
206 Strain fitness (log2 ratio) -2
-1
0
1
2 at 202.260 kb on + strand, within DZA65_RS00895 at 202.261 kb on - strand, within DZA65_RS00895 at 202.300 kb on + strand, within DZA65_RS00895 at 202.300 kb on + strand, within DZA65_RS00895 at 202.300 kb on + strand, within DZA65_RS00895 at 202.300 kb on + strand, within DZA65_RS00895 at 202.300 kb on + strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.301 kb on - strand, within DZA65_RS00895 at 202.310 kb on + strand, within DZA65_RS00895 at 202.311 kb on - strand, within DZA65_RS00895 at 202.364 kb on + strand, within DZA65_RS00895 at 202.495 kb on + strand, within DZA65_RS00895 at 202.495 kb on + strand, within DZA65_RS00895 at 202.495 kb on + strand, within DZA65_RS00895 at 202.495 kb on + strand, within DZA65_RS00895 at 202.495 kb on + strand, within DZA65_RS00895 at 202.496 kb on - strand, within DZA65_RS00895 at 202.496 kb on - strand, within DZA65_RS00895 at 202.503 kb on + strand at 202.639 kb on + strand at 202.639 kb on + strand at 202.639 kb on + strand at 202.639 kb on + strand at 202.639 kb on + strand at 202.640 kb on - strand at 202.640 kb on - strand at 202.640 kb on - strand at 202.640 kb on - strand at 202.640 kb on - strand at 202.640 kb on - strand at 202.643 kb on + strand at 202.644 kb on - strand at 202.644 kb on - strand at 202.702 kb on + strand at 202.752 kb on + strand at 202.752 kb on + strand at 202.753 kb on - strand at 202.753 kb on - strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.765 kb on + strand at 202.766 kb on - strand at 202.766 kb on - strand at 202.766 kb on - strand at 202.766 kb on - strand at 202.766 kb on - strand at 202.766 kb on - strand at 202.769 kb on + strand at 202.770 kb on - strand at 202.794 kb on + strand at 202.834 kb on + strand at 202.834 kb on + strand at 202.835 kb on - strand at 202.835 kb on - strand at 202.835 kb on - strand at 202.835 kb on - strand at 202.838 kb on + strand at 202.839 kb on - strand at 202.839 kb on - strand at 202.875 kb on + strand at 202.875 kb on + strand at 202.875 kb on + strand at 202.882 kb on + strand at 202.883 kb on - strand at 202.883 kb on - strand at 202.883 kb on - strand at 202.883 kb on - strand at 202.883 kb on - strand at 202.883 kb on - strand at 202.891 kb on - strand at 202.899 kb on - strand at 202.947 kb on + strand at 202.947 kb on + strand at 202.947 kb on + strand at 202.948 kb on - strand at 202.948 kb on - strand at 202.948 kb on - strand at 202.948 kb on - strand at 202.948 kb on - strand at 202.948 kb on - strand at 202.958 kb on + strand at 202.958 kb on + strand at 202.958 kb on + strand at 202.958 kb on + strand at 202.958 kb on + strand at 202.958 kb on + strand at 202.959 kb on - strand at 203.026 kb on + strand at 203.026 kb on + strand at 203.026 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.030 kb on + strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.031 kb on - strand at 203.037 kb on + strand at 203.037 kb on + strand at 203.037 kb on + strand at 203.037 kb on + strand at 203.037 kb on + strand at 203.038 kb on - strand at 203.038 kb on - strand at 203.038 kb on - strand at 203.038 kb on - strand at 203.040 kb on - strand at 203.172 kb on + strand at 203.297 kb on - strand at 203.334 kb on - strand, within DZA65_RS00900 at 203.415 kb on - strand, within DZA65_RS00900 at 203.576 kb on - strand, within DZA65_RS00900 at 203.585 kb on - strand, within DZA65_RS00900 at 203.587 kb on - strand, within DZA65_RS00900 at 203.764 kb on - strand, within DZA65_RS00900 at 204.309 kb on - strand, within DZA65_RS00900 at 204.461 kb on - strand, within DZA65_RS00900 at 204.504 kb on - strand, within DZA65_RS00900 at 204.504 kb on - strand, within DZA65_RS00900 at 204.504 kb on - strand, within DZA65_RS00900 at 204.510 kb on - strand, within DZA65_RS00900 at 204.510 kb on - strand, within DZA65_RS00900 at 204.556 kb on + strand, within DZA65_RS00900 at 204.738 kb on - strand, within DZA65_RS00900 at 204.759 kb on - strand, within DZA65_RS00900 at 204.865 kb on + strand, within DZA65_RS00900 at 204.910 kb on - strand, within DZA65_RS00900 at 205.064 kb on - strand at 205.185 kb on - strand at 205.315 kb on - strand, within DZA65_RS00905 at 205.388 kb on + strand, within DZA65_RS00905 at 205.433 kb on + strand, within DZA65_RS00905 at 205.549 kb on - strand, within DZA65_RS00905 at 205.731 kb on - strand, within DZA65_RS00905 at 205.855 kb on + strand, within DZA65_RS00905 at 205.856 kb on - strand, within DZA65_RS00905 at 205.856 kb on - strand, within DZA65_RS00905 at 205.856 kb on - strand, within DZA65_RS00905 at 205.919 kb on + strand, within DZA65_RS00905 at 205.926 kb on - strand, within DZA65_RS00905 at 205.950 kb on - strand, within DZA65_RS00905 at 205.971 kb on - strand, within DZA65_RS00905 at 206.012 kb on - strand, within DZA65_RS00905 at 206.028 kb on + strand at 206.070 kb on + strand, within DZA65_RS00905 at 206.146 kb on - strand, within DZA65_RS00905
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 202,260 + DZA65_RS00895 0.81 +0.1 202,261 - DZA65_RS00895 0.81 -1.1 202,300 + DZA65_RS00895 0.82 -0.4 202,300 + DZA65_RS00895 0.82 -1.0 202,300 + DZA65_RS00895 0.82 -0.2 202,300 + DZA65_RS00895 0.82 -0.1 202,300 + DZA65_RS00895 0.82 -1.0 202,301 - DZA65_RS00895 0.82 +0.6 202,301 - DZA65_RS00895 0.82 +1.9 202,301 - +1.0 202,301 - DZA65_RS00895 0.82 -0.1 202,301 - DZA65_RS00895 0.82 +1.8 202,301 - DZA65_RS00895 0.82 -0.1 202,301 - DZA65_RS00895 0.82 +1.1 202,301 - DZA65_RS00895 0.82 -1.4 202,310 + DZA65_RS00895 0.83 -0.1 202,311 - DZA65_RS00895 0.83 -0.6 202,364 + DZA65_RS00895 0.85 +1.0 202,495 + DZA65_RS00895 0.90 +0.8 202,495 + DZA65_RS00895 0.90 +0.1 202,495 + DZA65_RS00895 0.90 +0.5 202,495 + DZA65_RS00895 0.90 -0.5 202,495 + DZA65_RS00895 0.90 +1.1 202,496 - DZA65_RS00895 0.90 +0.6 202,496 - DZA65_RS00895 0.90 -0.1 202,503 + -0.1 202,639 + +0.2 202,639 + +0.5 202,639 + +1.0 202,639 + +0.4 202,639 + +0.1 202,640 - +0.2 202,640 - -1.1 202,640 - +0.1 202,640 - +0.5 202,640 - -1.2 202,640 - -0.2 202,643 + -0.9 202,644 - -0.1 202,644 - +0.3 202,702 + -1.4 202,752 + -0.1 202,752 + +0.1 202,753 - +0.8 202,753 - -0.2 202,765 + -0.7 202,765 + +1.2 202,765 + +1.4 202,765 + -2.4 202,765 + +0.1 202,765 + -0.7 202,765 + +1.2 202,766 - +0.1 202,766 - +0.9 202,766 - +0.9 202,766 - +0.6 202,766 - +0.5 202,766 - -0.8 202,769 + -0.5 202,770 - +1.1 202,794 + +0.1 202,834 + +0.3 202,834 + -0.7 202,835 - +1.2 202,835 - -0.1 202,835 - -0.4 202,835 - -0.8 202,838 + -0.8 202,839 - +1.3 202,839 - -2.0 202,875 + +0.6 202,875 + +0.1 202,875 + +0.0 202,882 + -0.2 202,883 - -0.3 202,883 - -0.9 202,883 - +0.2 202,883 - +1.1 202,883 - -0.1 202,883 - +0.2 202,891 - +0.1 202,899 - -0.3 202,947 + +0.5 202,947 + -2.0 202,947 + +0.2 202,948 - +1.3 202,948 - -0.4 202,948 - -0.7 202,948 - -0.8 202,948 - +0.6 202,948 - -1.9 202,958 + -1.7 202,958 + -0.4 202,958 + -0.2 202,958 + -0.8 202,958 + +1.6 202,958 + -0.1 202,959 - -0.9 203,026 + -0.2 203,026 + -1.0 203,026 + +0.8 203,030 + +0.6 203,030 + -0.4 203,030 + +0.5 203,030 + +0.3 203,030 + +0.0 203,030 + +0.2 203,030 + -0.4 203,030 + +0.2 203,030 + +0.7 203,030 + -0.4 203,030 + +0.8 203,031 - -0.4 203,031 - -0.1 203,031 - -0.7 203,031 - +0.3 203,031 - +0.6 203,031 - -2.0 203,031 - -0.2 203,031 - -0.7 203,031 - +1.1 203,031 - +0.3 203,031 - +0.1 203,037 + +0.4 203,037 + -0.4 203,037 + -0.1 203,037 + -0.7 203,037 + -0.4 203,038 - -1.0 203,038 - +0.1 203,038 - -0.4 203,038 - -2.2 203,040 - +0.1 203,172 + -1.7 203,297 - +1.2 203,334 - DZA65_RS00900 0.13 -0.7 203,415 - DZA65_RS00900 0.16 -0.4 203,576 - DZA65_RS00900 0.24 -1.0 203,585 - DZA65_RS00900 0.24 -0.3 203,587 - DZA65_RS00900 0.24 -2.4 203,764 - DZA65_RS00900 0.33 +0.2 204,309 - DZA65_RS00900 0.58 +0.4 204,461 - DZA65_RS00900 0.65 -0.2 204,504 - DZA65_RS00900 0.68 -0.4 204,504 - DZA65_RS00900 0.68 -1.5 204,504 - DZA65_RS00900 0.68 -0.8 204,510 - DZA65_RS00900 0.68 -0.8 204,510 - DZA65_RS00900 0.68 +1.4 204,556 + DZA65_RS00900 0.70 -1.0 204,738 - DZA65_RS00900 0.78 +1.2 204,759 - DZA65_RS00900 0.79 -1.5 204,865 + DZA65_RS00900 0.84 -1.6 204,910 - DZA65_RS00900 0.87 -0.3 205,064 - -0.1 205,185 - +2.0 205,315 - DZA65_RS00905 0.13 +0.1 205,388 + DZA65_RS00905 0.19 -0.5 205,433 + DZA65_RS00905 0.23 -1.1 205,549 - DZA65_RS00905 0.34 +0.4 205,731 - DZA65_RS00905 0.51 +1.7 205,855 + DZA65_RS00905 0.62 -0.4 205,856 - DZA65_RS00905 0.62 +0.4 205,856 - DZA65_RS00905 0.62 +0.0 205,856 - DZA65_RS00905 0.62 +1.2 205,919 + DZA65_RS00905 0.68 -0.7 205,926 - DZA65_RS00905 0.68 +0.3 205,950 - DZA65_RS00905 0.71 -0.1 205,971 - DZA65_RS00905 0.73 -0.2 206,012 - DZA65_RS00905 0.76 +0.9 206,028 + +1.6 206,070 + DZA65_RS00905 0.82 -1.4 206,146 - DZA65_RS00905 0.89 -0.1
Or see this region's nucleotide sequence