Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00265 and DZA65_RS00270 are separated by 75 nucleotides DZA65_RS00270 and DZA65_RS00275 are separated by 166 nucleotides DZA65_RS00275 and DZA65_RS00280 are separated by 105 nucleotides
DZA65_RS00265: DZA65_RS00265 - PTS mannitol transporter subunit IICBA, at 63,353 to 65,260
_RS00265
DZA65_RS00270: DZA65_RS00270 - mannitol-1-phosphate 5-dehydrogenase, at 65,336 to 66,484
_RS00270
DZA65_RS00275: DZA65_RS00275 - MltR family transcriptional regulator, at 66,651 to 67,181
_RS00275
DZA65_RS00280: DZA65_RS00280 - HAMP domain-containing protein, at 67,287 to 69,173
_RS00280
Position (kb) 65
66
67 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 64.408 kb on + strand, within DZA65_RS00265 at 64.409 kb on - strand, within DZA65_RS00265 at 64.409 kb on - strand, within DZA65_RS00265 at 64.480 kb on + strand, within DZA65_RS00265 at 64.522 kb on + strand, within DZA65_RS00265 at 64.523 kb on - strand, within DZA65_RS00265 at 64.551 kb on + strand at 64.551 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.718 kb on + strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.719 kb on - strand, within DZA65_RS00265 at 64.905 kb on + strand, within DZA65_RS00265 at 64.905 kb on + strand, within DZA65_RS00265 at 64.906 kb on - strand, within DZA65_RS00265 at 64.916 kb on + strand, within DZA65_RS00265 at 64.917 kb on - strand, within DZA65_RS00265 at 64.917 kb on - strand, within DZA65_RS00265 at 64.917 kb on - strand, within DZA65_RS00265 at 64.917 kb on - strand, within DZA65_RS00265 at 64.931 kb on + strand, within DZA65_RS00265 at 64.931 kb on + strand, within DZA65_RS00265 at 64.932 kb on - strand, within DZA65_RS00265 at 64.932 kb on - strand, within DZA65_RS00265 at 64.932 kb on - strand, within DZA65_RS00265 at 64.973 kb on + strand, within DZA65_RS00265 at 64.973 kb on + strand, within DZA65_RS00265 at 64.973 kb on + strand, within DZA65_RS00265 at 64.973 kb on + strand, within DZA65_RS00265 at 64.973 kb on + strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.974 kb on - strand, within DZA65_RS00265 at 64.977 kb on + strand, within DZA65_RS00265 at 64.977 kb on + strand, within DZA65_RS00265 at 64.977 kb on + strand, within DZA65_RS00265 at 64.978 kb on - strand, within DZA65_RS00265 at 64.978 kb on - strand, within DZA65_RS00265 at 65.161 kb on + strand at 65.161 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.190 kb on + strand at 65.191 kb on - strand at 65.191 kb on - strand at 65.191 kb on - strand at 65.191 kb on - strand at 65.266 kb on - strand at 65.266 kb on - strand at 65.309 kb on + strand at 65.309 kb on + strand at 65.309 kb on + strand at 65.309 kb on + strand at 65.310 kb on - strand at 65.310 kb on - strand at 65.319 kb on + strand at 65.320 kb on - strand at 65.320 kb on - strand at 65.320 kb on - strand at 65.320 kb on - strand at 65.320 kb on - strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.322 kb on + strand at 65.323 kb on - strand at 65.323 kb on - strand at 65.323 kb on - strand at 65.323 kb on - strand at 65.346 kb on + strand at 65.347 kb on - strand at 65.467 kb on + strand, within DZA65_RS00270 at 65.467 kb on + strand, within DZA65_RS00270 at 65.467 kb on + strand, within DZA65_RS00270 at 65.467 kb on + strand, within DZA65_RS00270 at 65.471 kb on + strand, within DZA65_RS00270 at 65.471 kb on + strand, within DZA65_RS00270 at 65.532 kb on + strand, within DZA65_RS00270 at 65.683 kb on + strand, within DZA65_RS00270 at 65.683 kb on + strand, within DZA65_RS00270 at 65.683 kb on + strand, within DZA65_RS00270 at 65.812 kb on + strand, within DZA65_RS00270 at 65.812 kb on + strand, within DZA65_RS00270 at 66.008 kb on + strand at 66.122 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.152 kb on + strand, within DZA65_RS00270 at 66.153 kb on - strand, within DZA65_RS00270 at 66.153 kb on - strand at 66.153 kb on - strand, within DZA65_RS00270 at 66.154 kb on + strand, within DZA65_RS00270 at 66.154 kb on + strand, within DZA65_RS00270 at 66.154 kb on + strand, within DZA65_RS00270 at 66.154 kb on + strand, within DZA65_RS00270 at 66.233 kb on - strand, within DZA65_RS00270 at 66.274 kb on + strand, within DZA65_RS00270 at 66.274 kb on + strand, within DZA65_RS00270 at 66.467 kb on + strand at 66.467 kb on + strand at 66.467 kb on + strand at 66.467 kb on + strand at 66.467 kb on + strand at 66.467 kb on + strand at 66.468 kb on - strand at 66.468 kb on - strand at 66.469 kb on + strand at 66.483 kb on - strand at 66.632 kb on + strand at 66.632 kb on + strand at 66.632 kb on + strand at 66.637 kb on + strand at 66.637 kb on + strand at 66.638 kb on - strand at 66.638 kb on - strand at 66.638 kb on - strand at 66.638 kb on - strand at 66.722 kb on + strand, within DZA65_RS00275 at 66.722 kb on + strand, within DZA65_RS00275 at 66.723 kb on - strand, within DZA65_RS00275 at 66.723 kb on - strand, within DZA65_RS00275 at 66.742 kb on + strand, within DZA65_RS00275 at 66.742 kb on + strand, within DZA65_RS00275 at 66.742 kb on + strand, within DZA65_RS00275 at 66.743 kb on - strand, within DZA65_RS00275 at 66.743 kb on - strand, within DZA65_RS00275 at 66.795 kb on + strand, within DZA65_RS00275 at 66.795 kb on + strand, within DZA65_RS00275 at 66.795 kb on + strand, within DZA65_RS00275 at 66.795 kb on + strand, within DZA65_RS00275 at 66.796 kb on - strand, within DZA65_RS00275 at 66.796 kb on - strand, within DZA65_RS00275 at 66.807 kb on + strand, within DZA65_RS00275 at 66.807 kb on + strand, within DZA65_RS00275 at 66.808 kb on - strand, within DZA65_RS00275 at 66.808 kb on - strand, within DZA65_RS00275 at 66.808 kb on - strand, within DZA65_RS00275 at 66.827 kb on - strand, within DZA65_RS00275 at 66.876 kb on + strand, within DZA65_RS00275 at 66.877 kb on - strand, within DZA65_RS00275 at 66.877 kb on - strand, within DZA65_RS00275 at 66.877 kb on - strand, within DZA65_RS00275 at 66.906 kb on + strand, within DZA65_RS00275 at 66.907 kb on - strand, within DZA65_RS00275 at 66.907 kb on - strand, within DZA65_RS00275 at 67.288 kb on + strand at 67.289 kb on - strand at 67.295 kb on + strand at 67.295 kb on + strand at 67.295 kb on + strand at 67.295 kb on + strand at 67.296 kb on - strand at 67.296 kb on - strand at 67.296 kb on - strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.297 kb on + strand at 67.298 kb on - strand at 67.298 kb on - strand at 67.298 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 64,408 + DZA65_RS00265 0.55 +0.4 64,409 - DZA65_RS00265 0.55 -1.6 64,409 - DZA65_RS00265 0.55 +0.5 64,480 + DZA65_RS00265 0.59 +0.4 64,522 + DZA65_RS00265 0.61 -2.0 64,523 - DZA65_RS00265 0.61 -0.9 64,551 + +1.0 64,551 + DZA65_RS00265 0.63 -0.3 64,718 + DZA65_RS00265 0.72 +0.8 64,718 + DZA65_RS00265 0.72 -1.4 64,718 + DZA65_RS00265 0.72 -0.9 64,718 + DZA65_RS00265 0.72 +0.3 64,718 + DZA65_RS00265 0.72 -0.0 64,718 + DZA65_RS00265 0.72 +0.2 64,718 + DZA65_RS00265 0.72 -0.6 64,718 + DZA65_RS00265 0.72 +0.2 64,718 + DZA65_RS00265 0.72 +2.4 64,718 + DZA65_RS00265 0.72 +0.6 64,718 + DZA65_RS00265 0.72 -2.0 64,719 - DZA65_RS00265 0.72 +0.2 64,719 - DZA65_RS00265 0.72 +0.2 64,719 - DZA65_RS00265 0.72 +0.9 64,719 - DZA65_RS00265 0.72 -0.4 64,719 - DZA65_RS00265 0.72 +0.7 64,719 - DZA65_RS00265 0.72 -0.5 64,719 - DZA65_RS00265 0.72 -1.7 64,905 + DZA65_RS00265 0.81 +0.1 64,905 + DZA65_RS00265 0.81 -0.6 64,906 - DZA65_RS00265 0.81 -0.7 64,916 + DZA65_RS00265 0.82 +0.6 64,917 - DZA65_RS00265 0.82 -0.7 64,917 - DZA65_RS00265 0.82 +0.4 64,917 - DZA65_RS00265 0.82 +0.6 64,917 - DZA65_RS00265 0.82 +0.9 64,931 + DZA65_RS00265 0.83 -0.1 64,931 + DZA65_RS00265 0.83 -0.1 64,932 - DZA65_RS00265 0.83 -0.1 64,932 - DZA65_RS00265 0.83 +0.2 64,932 - DZA65_RS00265 0.83 +0.4 64,973 + DZA65_RS00265 0.85 +1.8 64,973 + DZA65_RS00265 0.85 -0.7 64,973 + DZA65_RS00265 0.85 -0.1 64,973 + DZA65_RS00265 0.85 -1.5 64,973 + DZA65_RS00265 0.85 +0.2 64,974 - DZA65_RS00265 0.85 -0.1 64,974 - DZA65_RS00265 0.85 -0.2 64,974 - DZA65_RS00265 0.85 +0.1 64,974 - DZA65_RS00265 0.85 -0.1 64,974 - DZA65_RS00265 0.85 +0.0 64,974 - DZA65_RS00265 0.85 -1.7 64,977 + DZA65_RS00265 0.85 +1.1 64,977 + DZA65_RS00265 0.85 +0.6 64,977 + DZA65_RS00265 0.85 +0.1 64,978 - DZA65_RS00265 0.85 -0.1 64,978 - DZA65_RS00265 0.85 +1.1 65,161 + +0.4 65,161 + +0.3 65,190 + +0.7 65,190 + -0.5 65,190 + +0.3 65,190 + +0.0 65,190 + -0.7 65,190 + +0.4 65,190 + +0.0 65,190 + -1.6 65,191 - -0.7 65,191 - +1.6 65,191 - +1.3 65,191 - -0.1 65,266 - +0.8 65,266 - +1.2 65,309 + -2.0 65,309 + -0.5 65,309 + -3.1 65,309 + -0.2 65,310 - +1.1 65,310 - +0.0 65,319 + +1.7 65,320 - -1.3 65,320 - -0.4 65,320 - -0.3 65,320 - -1.0 65,320 - -1.7 65,322 + -1.7 65,322 + +0.6 65,322 + -0.4 65,322 + -0.3 65,322 + -0.8 65,322 + -0.6 65,322 + -1.4 65,323 - -1.9 65,323 - +0.6 65,323 - -1.3 65,323 - -1.4 65,346 + +1.4 65,347 - +0.2 65,467 + DZA65_RS00270 0.11 -1.1 65,467 + DZA65_RS00270 0.11 -1.2 65,467 + DZA65_RS00270 0.11 -0.5 65,467 + DZA65_RS00270 0.11 -1.0 65,471 + DZA65_RS00270 0.12 -1.5 65,471 + DZA65_RS00270 0.12 -1.5 65,532 + DZA65_RS00270 0.17 +0.1 65,683 + DZA65_RS00270 0.30 -0.0 65,683 + DZA65_RS00270 0.30 -0.7 65,683 + DZA65_RS00270 0.30 -0.5 65,812 + DZA65_RS00270 0.41 +0.0 65,812 + DZA65_RS00270 0.41 -1.4 66,008 + -1.7 66,122 + DZA65_RS00270 0.68 -0.7 66,152 + DZA65_RS00270 0.71 -1.2 66,152 + DZA65_RS00270 0.71 -0.9 66,152 + DZA65_RS00270 0.71 -1.0 66,152 + DZA65_RS00270 0.71 -0.2 66,152 + DZA65_RS00270 0.71 +0.5 66,152 + DZA65_RS00270 0.71 -0.7 66,152 + DZA65_RS00270 0.71 -0.4 66,152 + DZA65_RS00270 0.71 +2.6 66,152 + DZA65_RS00270 0.71 -1.0 66,152 + DZA65_RS00270 0.71 -0.4 66,152 + DZA65_RS00270 0.71 -1.4 66,152 + DZA65_RS00270 0.71 -1.0 66,152 + DZA65_RS00270 0.71 +0.6 66,152 + DZA65_RS00270 0.71 +1.0 66,153 - DZA65_RS00270 0.71 +0.0 66,153 - -0.7 66,153 - DZA65_RS00270 0.71 -1.2 66,154 + DZA65_RS00270 0.71 -0.6 66,154 + DZA65_RS00270 0.71 +0.2 66,154 + DZA65_RS00270 0.71 +0.0 66,154 + DZA65_RS00270 0.71 -0.2 66,233 - DZA65_RS00270 0.78 -0.5 66,274 + DZA65_RS00270 0.82 -0.1 66,274 + DZA65_RS00270 0.82 +0.6 66,467 + -0.8 66,467 + -0.1 66,467 + -1.2 66,467 + -0.6 66,467 + -0.6 66,467 + +0.2 66,468 - +0.2 66,468 - -0.1 66,469 + +0.4 66,483 - +1.2 66,632 + +0.3 66,632 + +0.1 66,632 + -0.2 66,637 + -1.0 66,637 + +1.6 66,638 - -0.5 66,638 - -0.1 66,638 - -0.4 66,638 - -0.2 66,722 + DZA65_RS00275 0.13 -1.0 66,722 + DZA65_RS00275 0.13 -0.3 66,723 - DZA65_RS00275 0.14 -1.5 66,723 - DZA65_RS00275 0.14 -0.2 66,742 + DZA65_RS00275 0.17 -2.2 66,742 + DZA65_RS00275 0.17 -0.8 66,742 + DZA65_RS00275 0.17 +0.1 66,743 - DZA65_RS00275 0.17 -2.0 66,743 - DZA65_RS00275 0.17 +0.4 66,795 + DZA65_RS00275 0.27 -0.9 66,795 + DZA65_RS00275 0.27 -1.1 66,795 + DZA65_RS00275 0.27 -2.5 66,795 + DZA65_RS00275 0.27 -0.0 66,796 - DZA65_RS00275 0.27 +0.2 66,796 - DZA65_RS00275 0.27 -0.3 66,807 + DZA65_RS00275 0.29 -0.4 66,807 + DZA65_RS00275 0.29 -1.0 66,808 - DZA65_RS00275 0.30 +0.1 66,808 - DZA65_RS00275 0.30 -2.4 66,808 - DZA65_RS00275 0.30 +0.3 66,827 - DZA65_RS00275 0.33 -0.4 66,876 + DZA65_RS00275 0.42 -0.8 66,877 - DZA65_RS00275 0.43 +0.4 66,877 - DZA65_RS00275 0.43 -0.3 66,877 - DZA65_RS00275 0.43 -0.2 66,906 + DZA65_RS00275 0.48 -0.4 66,907 - DZA65_RS00275 0.48 +1.4 66,907 - DZA65_RS00275 0.48 -1.0 67,288 + -0.4 67,289 - +1.4 67,295 + -2.0 67,295 + -1.3 67,295 + +0.1 67,295 + -0.7 67,296 - -0.9 67,296 - -0.4 67,296 - -0.4 67,297 + +0.8 67,297 + +0.6 67,297 + -0.5 67,297 + +0.0 67,297 + +0.6 67,297 + +0.8 67,297 + +0.5 67,297 + -0.8 67,297 + -1.4 67,298 - -0.5 67,298 - -0.4 67,298 - -0.3
Or see this region's nucleotide sequence