Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00065 and DZA65_RS00070 are separated by 208 nucleotides DZA65_RS00070 and DZA65_RS00080 are separated by 691 nucleotides
DZA65_RS00065: DZA65_RS00065 - adenylosuccinate lyase family protein, at 15,673 to 17,025
_RS00065
DZA65_RS00070: DZA65_RS00070 - GntR family transcriptional regulator, at 17,234 to 17,968
_RS00070
DZA65_RS00080: DZA65_RS00080 - MBOAT family protein, at 18,660 to 20,063
_RS00080
Position (kb)
17
18 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 16.269 kb on - strand, within DZA65_RS00065 at 16.269 kb on - strand, within DZA65_RS00065 at 16.269 kb on - strand, within DZA65_RS00065 at 16.509 kb on + strand, within DZA65_RS00065 at 16.509 kb on + strand, within DZA65_RS00065 at 16.510 kb on - strand, within DZA65_RS00065 at 16.510 kb on - strand, within DZA65_RS00065 at 16.510 kb on - strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.723 kb on + strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.724 kb on - strand, within DZA65_RS00065 at 16.727 kb on + strand, within DZA65_RS00065 at 16.727 kb on + strand, within DZA65_RS00065 at 16.727 kb on + strand, within DZA65_RS00065 at 16.728 kb on - strand, within DZA65_RS00065 at 16.728 kb on - strand, within DZA65_RS00065 at 16.852 kb on + strand, within DZA65_RS00065 at 16.852 kb on + strand, within DZA65_RS00065 at 16.853 kb on - strand, within DZA65_RS00065 at 16.853 kb on - strand, within DZA65_RS00065 at 16.928 kb on + strand at 16.928 kb on + strand at 16.929 kb on - strand at 16.929 kb on - strand at 17.001 kb on + strand at 17.001 kb on + strand at 17.001 kb on + strand at 17.002 kb on - strand at 17.049 kb on + strand at 17.049 kb on + strand at 17.055 kb on + strand at 17.067 kb on + strand at 17.070 kb on + strand at 17.070 kb on + strand at 17.070 kb on + strand at 17.070 kb on + strand at 17.071 kb on - strand at 17.071 kb on - strand at 17.082 kb on + strand at 17.083 kb on - strand at 17.087 kb on + strand at 17.088 kb on - strand at 17.088 kb on - strand at 17.184 kb on - strand at 17.184 kb on - strand at 17.227 kb on + strand at 17.227 kb on + strand at 17.227 kb on + strand at 17.227 kb on + strand at 17.228 kb on - strand at 17.249 kb on + strand at 17.249 kb on + strand at 17.249 kb on + strand at 17.249 kb on + strand at 17.249 kb on + strand at 17.250 kb on - strand at 17.251 kb on + strand at 17.252 kb on - strand at 17.252 kb on - strand at 17.252 kb on - strand at 17.297 kb on + strand at 17.362 kb on + strand, within DZA65_RS00070 at 17.363 kb on - strand, within DZA65_RS00070 at 17.509 kb on + strand, within DZA65_RS00070 at 17.510 kb on - strand, within DZA65_RS00070 at 17.515 kb on - strand, within DZA65_RS00070 at 17.553 kb on - strand, within DZA65_RS00070 at 17.603 kb on - strand, within DZA65_RS00070 at 17.611 kb on + strand, within DZA65_RS00070 at 17.612 kb on - strand, within DZA65_RS00070 at 17.628 kb on + strand, within DZA65_RS00070 at 17.629 kb on - strand, within DZA65_RS00070 at 17.663 kb on + strand, within DZA65_RS00070 at 17.663 kb on + strand, within DZA65_RS00070 at 17.664 kb on - strand, within DZA65_RS00070 at 17.664 kb on - strand, within DZA65_RS00070 at 17.664 kb on - strand, within DZA65_RS00070 at 17.664 kb on - strand, within DZA65_RS00070 at 17.664 kb on - strand, within DZA65_RS00070 at 17.747 kb on + strand, within DZA65_RS00070 at 17.755 kb on - strand, within DZA65_RS00070 at 17.761 kb on + strand, within DZA65_RS00070 at 17.761 kb on + strand, within DZA65_RS00070 at 17.762 kb on - strand, within DZA65_RS00070 at 17.762 kb on - strand, within DZA65_RS00070 at 17.769 kb on + strand, within DZA65_RS00070 at 17.770 kb on + strand, within DZA65_RS00070 at 17.770 kb on - strand, within DZA65_RS00070 at 17.770 kb on - strand, within DZA65_RS00070 at 17.780 kb on - strand, within DZA65_RS00070 at 17.780 kb on - strand, within DZA65_RS00070 at 17.782 kb on + strand, within DZA65_RS00070 at 17.925 kb on - strand at 17.926 kb on + strand at 17.926 kb on + strand at 17.926 kb on + strand at 17.926 kb on + strand at 17.926 kb on + strand at 17.926 kb on + strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.927 kb on - strand at 17.962 kb on + strand at 17.962 kb on + strand at 17.962 kb on + strand at 17.962 kb on + strand at 17.963 kb on - strand at 17.966 kb on + strand at 17.966 kb on + strand at 17.966 kb on + strand at 17.966 kb on + strand at 17.966 kb on + strand at 17.967 kb on - strand at 17.967 kb on - strand at 17.967 kb on - strand at 17.967 kb on - strand at 18.055 kb on - strand at 18.101 kb on - strand at 18.144 kb on + strand at 18.156 kb on + strand at 18.156 kb on + strand at 18.157 kb on - strand at 18.221 kb on - strand at 18.246 kb on - strand at 18.250 kb on + strand at 18.258 kb on - strand at 18.258 kb on - strand at 18.306 kb on - strand at 18.371 kb on - strand at 18.383 kb on + strand at 18.384 kb on - strand at 18.387 kb on - strand at 18.387 kb on - strand at 18.461 kb on + strand at 18.461 kb on + strand at 18.461 kb on + strand at 18.462 kb on - strand at 18.502 kb on - strand at 18.533 kb on + strand at 18.533 kb on + strand at 18.533 kb on + strand at 18.534 kb on - strand at 18.534 kb on - strand at 18.549 kb on + strand at 18.558 kb on + strand at 18.606 kb on - strand at 18.771 kb on + strand at 18.834 kb on - strand, within DZA65_RS00080 at 18.930 kb on - strand, within DZA65_RS00080 at 18.937 kb on - strand, within DZA65_RS00080
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 16,269 - DZA65_RS00065 0.44 +0.4 16,269 - DZA65_RS00065 0.44 +0.5 16,269 - DZA65_RS00065 0.44 +0.4 16,509 + DZA65_RS00065 0.62 -0.5 16,509 + DZA65_RS00065 0.62 +0.6 16,510 - DZA65_RS00065 0.62 +0.2 16,510 - DZA65_RS00065 0.62 +0.7 16,510 - DZA65_RS00065 0.62 -1.7 16,723 + DZA65_RS00065 0.78 +0.4 16,723 + DZA65_RS00065 0.78 -0.2 16,723 + DZA65_RS00065 0.78 -1.6 16,723 + DZA65_RS00065 0.78 -0.4 16,723 + DZA65_RS00065 0.78 +0.0 16,723 + DZA65_RS00065 0.78 +0.8 16,723 + DZA65_RS00065 0.78 -0.5 16,723 + DZA65_RS00065 0.78 +0.0 16,723 + DZA65_RS00065 0.78 +0.9 16,723 + DZA65_RS00065 0.78 -0.2 16,723 + DZA65_RS00065 0.78 +0.7 16,723 + DZA65_RS00065 0.78 -0.9 16,724 - DZA65_RS00065 0.78 -0.4 16,724 - DZA65_RS00065 0.78 -0.1 16,724 - DZA65_RS00065 0.78 +0.8 16,724 - DZA65_RS00065 0.78 -2.2 16,724 - DZA65_RS00065 0.78 +1.3 16,724 - DZA65_RS00065 0.78 +1.2 16,724 - DZA65_RS00065 0.78 -0.6 16,724 - DZA65_RS00065 0.78 +1.0 16,724 - DZA65_RS00065 0.78 +0.0 16,724 - DZA65_RS00065 0.78 -0.7 16,724 - DZA65_RS00065 0.78 +1.0 16,724 - DZA65_RS00065 0.78 -0.7 16,724 - DZA65_RS00065 0.78 +0.4 16,724 - DZA65_RS00065 0.78 +1.1 16,727 + DZA65_RS00065 0.78 +0.1 16,727 + DZA65_RS00065 0.78 -0.4 16,727 + DZA65_RS00065 0.78 +0.4 16,728 - DZA65_RS00065 0.78 +0.1 16,728 - DZA65_RS00065 0.78 -0.5 16,852 + DZA65_RS00065 0.87 -0.4 16,852 + DZA65_RS00065 0.87 -0.1 16,853 - DZA65_RS00065 0.87 +0.4 16,853 - DZA65_RS00065 0.87 +0.0 16,928 + -0.1 16,928 + +0.6 16,929 - +0.3 16,929 - +0.2 17,001 + +1.4 17,001 + -0.6 17,001 + -1.3 17,002 - -0.1 17,049 + -0.4 17,049 + -0.3 17,055 + -0.1 17,067 + -1.0 17,070 + +0.1 17,070 + -0.7 17,070 + +0.1 17,070 + +0.1 17,071 - +0.5 17,071 - -0.1 17,082 + -1.6 17,083 - -0.4 17,087 + -0.1 17,088 - +0.6 17,088 - -0.4 17,184 - -0.2 17,184 - -0.3 17,227 + -0.8 17,227 + +0.1 17,227 + +2.2 17,227 + +1.5 17,228 - +0.5 17,249 + -0.7 17,249 + -0.8 17,249 + -0.3 17,249 + -0.3 17,249 + -1.3 17,250 - -0.4 17,251 + -1.0 17,252 - -1.4 17,252 - -0.4 17,252 - -0.4 17,297 + -0.0 17,362 + DZA65_RS00070 0.17 +1.0 17,363 - DZA65_RS00070 0.18 -1.4 17,509 + DZA65_RS00070 0.37 -0.8 17,510 - DZA65_RS00070 0.38 -0.6 17,515 - DZA65_RS00070 0.38 -1.2 17,553 - DZA65_RS00070 0.43 +1.6 17,603 - DZA65_RS00070 0.50 -0.7 17,611 + DZA65_RS00070 0.51 +1.1 17,612 - DZA65_RS00070 0.51 -0.7 17,628 + DZA65_RS00070 0.54 +0.9 17,629 - DZA65_RS00070 0.54 -1.3 17,663 + DZA65_RS00070 0.58 -0.9 17,663 + DZA65_RS00070 0.58 -0.5 17,664 - DZA65_RS00070 0.59 -0.3 17,664 - DZA65_RS00070 0.59 -2.6 17,664 - DZA65_RS00070 0.59 -0.7 17,664 - DZA65_RS00070 0.59 +0.6 17,664 - DZA65_RS00070 0.59 +0.6 17,747 + DZA65_RS00070 0.70 -1.3 17,755 - DZA65_RS00070 0.71 +1.2 17,761 + DZA65_RS00070 0.72 -1.1 17,761 + DZA65_RS00070 0.72 -0.3 17,762 - DZA65_RS00070 0.72 -0.5 17,762 - DZA65_RS00070 0.72 +0.0 17,769 + DZA65_RS00070 0.73 +0.6 17,770 + DZA65_RS00070 0.73 -0.6 17,770 - DZA65_RS00070 0.73 +0.2 17,770 - DZA65_RS00070 0.73 -1.6 17,780 - DZA65_RS00070 0.74 -0.8 17,780 - DZA65_RS00070 0.74 +0.2 17,782 + DZA65_RS00070 0.75 -0.3 17,925 - -0.5 17,926 + +0.6 17,926 + -0.7 17,926 + -0.1 17,926 + +0.6 17,926 + -1.5 17,926 + -0.8 17,927 - -0.7 17,927 - -1.0 17,927 - -0.6 17,927 - -0.1 17,927 - +0.6 17,927 - +0.0 17,927 - -2.1 17,927 - +0.6 17,927 - +0.3 17,927 - -0.5 17,927 - +0.6 17,927 - -0.1 17,927 - -1.0 17,962 + -1.2 17,962 + -0.6 17,962 + +0.1 17,962 + +1.2 17,963 - -0.7 17,966 + -0.2 17,966 + +0.6 17,966 + +0.2 17,966 + -0.4 17,966 + +1.3 17,967 - +0.8 17,967 - -0.2 17,967 - -0.2 17,967 - +0.9 18,055 - -1.0 18,101 - +0.2 18,144 + +2.9 18,156 + -1.1 18,156 + +0.5 18,157 - -1.2 18,221 - -1.0 18,246 - +0.9 18,250 + +1.0 18,258 - -0.3 18,258 - -1.0 18,306 - -1.7 18,371 - -0.8 18,383 + -0.5 18,384 - +0.2 18,387 - +0.4 18,387 - -0.1 18,461 + -0.3 18,461 + +0.1 18,461 + +0.1 18,462 - -0.3 18,502 - +0.5 18,533 + +0.3 18,533 + +0.2 18,533 + +0.3 18,534 - +0.1 18,534 - -2.0 18,549 + -0.7 18,558 + +0.3 18,606 - +0.0 18,771 + +0.3 18,834 - DZA65_RS00080 0.12 +0.6 18,930 - DZA65_RS00080 0.19 +1.6 18,937 - DZA65_RS00080 0.20 +0.0
Or see this region's nucleotide sequence