Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS21700

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,695,184	+		DZA65_RS21695	0.13	-1.4
4,695,184	+		DZA65_RS21695	0.13	-1.3
4,695,185	-		DZA65_RS21695	0.13	-0.3
4,695,185	-		DZA65_RS21695	0.13	-1.4
4,695,185	-		DZA65_RS21695	0.13	+0.2
4,695,195	-		DZA65_RS21695	0.14	-0.9
4,695,195	-		DZA65_RS21695	0.14	+0.4
4,695,196	+		DZA65_RS21695	0.14	+0.3
4,695,290	+		DZA65_RS21695	0.25	-0.0
4,695,601	+		DZA65_RS21695	0.59	-0.7
4,695,601	+		DZA65_RS21695	0.59	+0.2
4,695,647	+		DZA65_RS21695	0.64	+0.2
4,695,772	+		DZA65_RS21695	0.78	-2.5
4,695,772	+		DZA65_RS21695	0.78	-0.2
4,695,773	-		DZA65_RS21695	0.78	+0.4
4,695,773	-		DZA65_RS21695	0.78	+0.1
4,695,889	+				+0.5
4,695,889	+				+0.3
4,695,890	-				-0.4
4,695,928	+				-1.2
4,695,928	+				-0.1
4,695,929	-				-0.4
4,695,929	-				-0.8
4,696,011	+				+1.9
4,696,011	+				+0.3
4,696,011	+				+0.1
4,696,011	+				-0.4
4,696,012	-				-0.5
4,696,024	+				-0.2
4,696,024	+				+0.2
4,696,025	-				-0.5
4,696,025	-				+1.4
4,696,057	+				-0.1
4,696,057	+				-0.4
4,696,057	+				+0.0
4,696,057	+				+0.3
4,696,057	+				+0.3
4,696,057	+				-1.7
4,696,058	-				-0.4
4,696,058	-				-1.4
4,696,058	-				+0.6
4,696,058	-				+0.6
4,696,058	-				-1.7
4,696,058	-				-1.1
4,696,058	-				-0.2
4,696,058	-				+0.3
4,696,059	+				+0.4
4,696,059	+				+2.8
4,696,059	+				-0.1
4,696,059	+				-0.7
4,696,059	+				+0.2
4,696,059	+				-0.0
4,696,059	+				-0.2
4,696,059	+				+0.3
4,696,060	-				+0.0
4,696,060	-				-0.7
4,696,060	-				-0.8
4,696,060	-				+0.4
4,696,060	-				+0.3
4,696,070	-				+1.4
4,696,093	+				-1.2
4,696,094	-				+1.1
4,696,109	+				+0.1
4,696,116	+				-0.1
4,696,116	+				+0.9
4,696,116	+				+0.3
4,696,116	+				+0.2
4,696,116	+				-0.4
4,696,116	+				-0.8
4,696,116	+				+1.9
4,696,116	+				+0.1
4,696,116	+				-0.5
4,696,117	-				-0.2
4,696,117	-				+0.7
4,696,117	-				+0.9
4,696,120	+				+0.2
4,696,120	+				+0.2
4,696,120	+				+0.7
4,696,120	+				+1.0
4,696,120	+				+0.9
4,696,120	+				-0.8
4,696,120	+				-1.0
4,696,120	+				+1.1
4,696,120	+				-1.0
4,696,120	+				+1.6
4,696,120	+				+0.1
4,696,120	+				-1.0
4,696,120	+				+0.6
4,696,120	+				+0.6
4,696,120	+				+0.1
4,696,121	-				-1.7
4,696,121	-				-0.4
4,696,121	-				+0.3
4,696,121	-				+0.9
4,696,121	-				-0.0
4,696,121	-				-0.8
4,696,121	-				+0.2
4,696,121	-				+0.3
4,696,121	-				+0.6
4,696,121	-				+0.4
4,696,121	-				-1.4
4,696,121	-				+0.6
4,696,121	-				+0.2
4,696,121	-				-0.2
4,696,141	+				+0.1
4,696,195	+				+0.6
4,696,195	+				-0.2
4,696,195	+				+1.2
4,696,195	+				+0.3
4,696,196	-				+0.3
4,696,196	-				+0.9
4,696,196	-				-1.0
4,696,196	-				+1.0
4,696,197	+		DZA65_RS21700	0.10	-0.2
4,696,197	+		DZA65_RS21700	0.10	-0.1
4,696,197	+		DZA65_RS21700	0.10	-0.4
4,696,197	+		DZA65_RS21700	0.10	+1.0
4,696,197	+		DZA65_RS21700	0.10	-1.4
4,696,197	+		DZA65_RS21700	0.10	-0.6
4,696,197	+		DZA65_RS21700	0.10	+0.5
4,696,198	-		DZA65_RS21700	0.11	-0.9
4,696,198	-		DZA65_RS21700	0.11	-1.1
4,696,198	-		DZA65_RS21700	0.11	+0.0
4,696,198	-		DZA65_RS21700	0.11	-1.6
4,696,198	-		DZA65_RS21700	0.11	-0.1
4,696,198	-		DZA65_RS21700	0.11	-0.9
4,696,321	+		DZA65_RS21700	0.76	-0.6
4,696,373	+				-0.7
4,696,373	+				-0.0
4,696,373	+				-0.6
4,696,374	-				-1.2
4,696,417	-				-1.1
4,696,424	+				-0.3
4,696,424	+				+0.7
4,696,424	+				-1.7
4,696,424	+				+0.4
4,696,424	+				-0.3
4,696,425	-				-0.2
4,696,425	-				-2.2
4,696,469	+				-0.2
4,696,512	-				+0.3
4,696,595	+				-0.1
4,696,595	+				+0.6
4,696,641	-				+0.1
4,696,701	-				+0.7
4,696,707	+				-1.0
4,696,713	+				+0.6
4,696,713	+				+1.8
4,696,714	-				-0.0
4,696,715	+				-0.4
4,696,715	+				+1.4
4,696,754	-				+0.3
4,696,766	+				+0.6
4,696,772	+				-0.6
4,696,822	-				-0.4
4,696,905	+		DZA65_RS21710	0.14	-1.1
4,696,905	+		DZA65_RS21710	0.14	-0.5
4,696,906	-		DZA65_RS21710	0.14	+0.6
4,696,936	-		DZA65_RS21710	0.21	+0.0
4,696,991	+		DZA65_RS21710	0.32	-1.4
4,696,991	+		DZA65_RS21710	0.32	+0.6
4,696,992	-		DZA65_RS21710	0.32	-0.0
4,696,992	-		DZA65_RS21710	0.32	+0.6
4,697,052	+		DZA65_RS21710	0.45	+0.3
4,697,055	+		DZA65_RS21710	0.45	+0.9
4,697,055	+		DZA65_RS21710	0.45	+0.7
4,697,056	-		DZA65_RS21710	0.46	-2.5
4,697,056	-		DZA65_RS21710	0.46	-0.7
4,697,056	-		DZA65_RS21710	0.46	-3.0
4,697,056	-		DZA65_RS21710	0.46	-2.6
4,697,097	+		DZA65_RS21710	0.54	+0.4
4,697,097	+		DZA65_RS21710	0.54	+0.6
4,697,098	-		DZA65_RS21710	0.54	-0.4
4,697,098	-		DZA65_RS21710	0.54	-0.1
4,697,158	+		DZA65_RS21710	0.67	+0.8
4,697,159	-		DZA65_RS21710	0.67	+0.6
4,697,311	+				-0.2
4,697,311	+				-1.0
4,697,311	+				+1.2
4,697,311	+				-0.7
4,697,311	+				+0.5
4,697,312	-				+0.3