Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20835

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,494,603	+		DZA65_RS20830	0.53	+0.4
4,494,603	+		DZA65_RS20830	0.53	-0.1
4,494,603	+		DZA65_RS20830	0.53	+0.4
4,494,644	+		DZA65_RS20830	0.55	+0.2
4,494,644	+		DZA65_RS20830	0.55	-0.8
4,494,645	-		DZA65_RS20830	0.55	-3.3
4,494,648	+		DZA65_RS20830	0.55	+0.4
4,494,648	+				+0.9
4,494,649	-		DZA65_RS20830	0.55	-0.7
4,494,649	-				+0.9
4,494,649	-		DZA65_RS20830	0.55	-1.3
4,494,754	-		DZA65_RS20830	0.62	+0.5
4,494,762	+		DZA65_RS20830	0.62	-1.4
4,494,762	+		DZA65_RS20830	0.62	+0.4
4,494,762	+		DZA65_RS20830	0.62	+0.6
4,494,762	+		DZA65_RS20830	0.62	-0.7
4,494,762	+		DZA65_RS20830	0.62	+0.7
4,494,762	+		DZA65_RS20830	0.62	+1.4
4,494,762	+		DZA65_RS20830	0.62	-0.9
4,494,762	+		DZA65_RS20830	0.62	-0.7
4,494,762	+		DZA65_RS20830	0.62	-0.9
4,494,763	-		DZA65_RS20830	0.62	+0.8
4,494,763	-		DZA65_RS20830	0.62	+0.2
4,494,763	-		DZA65_RS20830	0.62	-0.9
4,494,763	-		DZA65_RS20830	0.62	-0.6
4,494,763	-		DZA65_RS20830	0.62	+0.2
4,494,763	-		DZA65_RS20830	0.62	+0.6
4,494,763	-		DZA65_RS20830	0.62	+0.6
4,494,763	-		DZA65_RS20830	0.62	-0.3
4,494,763	-		DZA65_RS20830	0.62	+0.3
4,494,763	-		DZA65_RS20830	0.62	-0.4
4,494,889	-		DZA65_RS20830	0.70	+0.1
4,495,056	+		DZA65_RS20830	0.81	+0.6
4,495,056	+		DZA65_RS20830	0.81	+0.5
4,495,057	-		DZA65_RS20830	0.81	+1.1
4,495,057	-		DZA65_RS20830	0.81	+1.1
4,495,057	-		DZA65_RS20830	0.81	-1.4
4,495,175	+		DZA65_RS20830	0.88	+0.4
4,495,175	+		DZA65_RS20830	0.88	+0.4
4,495,175	+		DZA65_RS20830	0.88	+0.8
4,495,175	+		DZA65_RS20830	0.88	+1.7
4,495,176	-		DZA65_RS20830	0.88	-0.4
4,495,245	+				+1.0
4,495,245	+				-1.0
4,495,245	+				+0.6
4,495,245	+				+1.9
4,495,245	+				+0.9
4,495,245	+				+0.8
4,495,245	+				+0.6
4,495,245	+				-0.9
4,495,245	+				+0.6
4,495,245	+				-0.8
4,495,245	+				-0.2
4,495,245	+				-0.5
4,495,245	+				-0.4
4,495,246	-				-0.7
4,495,246	-				-0.0
4,495,246	-				-0.7
4,495,246	-				+0.3
4,495,246	-				+1.0
4,495,246	-				-1.0
4,495,246	-				-0.4
4,495,246	-				+1.0
4,495,246	-				-0.1
4,495,246	-				-0.3
4,495,246	-				-0.8
4,495,246	-				+0.1
4,495,246	-				-0.4
4,495,246	-				+0.1
4,495,248	-				-0.1
4,495,298	+				-0.9
4,495,298	+				+0.2
4,495,299	-				+0.3
4,495,317	+				+0.4
4,495,317	+				-0.4
4,495,317	+				-0.1
4,495,317	+				+0.6
4,495,318	-				+0.4
4,495,318	-				-0.1
4,495,318	-				+1.7
4,495,318	-				-2.3
4,495,318	-				+0.1
4,495,318	-				-2.0
4,495,318	-				-0.6
4,495,318	-				+0.3
4,495,318	-				-0.2
4,495,318	-				-1.0
4,495,318	-				-1.0
4,495,368	+				+1.0
4,495,378	-				-1.2
4,495,381	+				+0.1
4,495,420	+				+1.2
4,495,461	+				+0.7
4,495,469	+				+0.2
4,495,573	+				+0.9
4,495,573	+				+0.1
4,495,574	-				-1.4
4,495,574	-				-1.6
4,495,574	-				-0.8
4,495,577	+				+1.2
4,495,578	-				-0.4
4,495,578	-				-2.0
4,495,578	-				-0.6
4,495,645	-		DZA65_RS20835	0.13	-0.0
4,495,645	-		DZA65_RS20835	0.13	-1.2
4,495,645	-				-1.0
4,495,648	-		DZA65_RS20835	0.13	-1.0
4,495,895	-				+0.3
4,495,938	-		DZA65_RS20835	0.33	+0.1
4,496,021	+		DZA65_RS20835	0.39	-0.8
4,496,022	-		DZA65_RS20835	0.39	-1.0
4,496,049	+		DZA65_RS20835	0.41	-0.7
4,496,050	-		DZA65_RS20835	0.41	+1.4
4,496,068	-		DZA65_RS20835	0.42	-0.2
4,496,088	-		DZA65_RS20835	0.44	-0.9
4,496,178	+		DZA65_RS20835	0.50	+0.1
4,496,258	+		DZA65_RS20835	0.56	-0.2
4,496,258	+		DZA65_RS20835	0.56	-1.4
4,496,281	-		DZA65_RS20835	0.58	-0.7
4,496,281	-		DZA65_RS20835	0.58	+0.6
4,496,283	+		DZA65_RS20835	0.58	-2.0
4,496,283	+		DZA65_RS20835	0.58	-2.8
4,496,284	-		DZA65_RS20835	0.58	-0.1
4,496,284	-				+1.9
4,496,302	-		DZA65_RS20835	0.59	-0.4
4,496,374	+		DZA65_RS20835	0.64	-0.8
4,496,374	+		DZA65_RS20835	0.64	-0.4
4,496,375	-		DZA65_RS20835	0.64	-1.4
4,496,375	-		DZA65_RS20835	0.64	-2.6
4,496,379	+		DZA65_RS20835	0.64	-1.0
4,496,380	-		DZA65_RS20835	0.65	-2.6
4,496,391	+		DZA65_RS20835	0.65	+0.1
4,496,391	+		DZA65_RS20835	0.65	-0.1
4,496,391	+		DZA65_RS20835	0.65	-0.4
4,496,392	-		DZA65_RS20835	0.65	-2.0
4,496,392	-		DZA65_RS20835	0.65	-0.2
4,496,393	+		DZA65_RS20835	0.65	+1.8
4,496,567	+		DZA65_RS20835	0.78	+1.1
4,496,567	+		DZA65_RS20835	0.78	-0.2
4,496,567	+		DZA65_RS20835	0.78	-1.2
4,496,568	-		DZA65_RS20835	0.78	+0.2
4,496,568	-		DZA65_RS20835	0.78	+0.5
4,496,568	-		DZA65_RS20835	0.78	-0.9
4,496,568	-		DZA65_RS20835	0.78	-0.2
4,496,615	+		DZA65_RS20835	0.81	+1.0
4,496,616	-		DZA65_RS20835	0.81	-2.8
4,496,639	+		DZA65_RS20835	0.83	-2.4
4,496,726	+		DZA65_RS20835	0.89	-2.2
4,496,727	-		DZA65_RS20835	0.89	+0.3
4,496,775	+				-1.2
4,496,776	-				+0.3
4,496,776	-				-1.8
4,496,776	-				-1.0
4,496,789	+				+2.6
4,496,789	+				-1.4
4,496,789	+				+1.1
4,496,790	-				-0.6
4,496,820	+				-1.9
4,496,838	+				+1.1
4,496,838	+				+0.1
4,496,886	-				-0.4
4,496,934	-				+1.9
4,496,934	-				+1.0
4,496,934	-				-0.4
4,496,935	+				-1.4
4,496,961	+		DZA65_RS20840	0.12	-0.2
4,496,961	+				+0.1
4,496,961	+		DZA65_RS20840	0.12	-1.5
4,497,015	-		DZA65_RS20840	0.19	-2.9
4,497,015	-		DZA65_RS20840	0.19	+0.1
4,497,016	+		DZA65_RS20840	0.19	+0.9
4,497,016	+				-1.4
4,497,017	-		DZA65_RS20840	0.19	-2.0
4,497,261	+		DZA65_RS20840	0.53	-0.7
4,497,262	-		DZA65_RS20840	0.53	+0.6
4,497,292	+		DZA65_RS20840	0.58	-0.2
4,497,292	+		DZA65_RS20840	0.58	-0.2
4,497,293	-		DZA65_RS20840	0.58	-0.4
4,497,293	-		DZA65_RS20840	0.58	+0.6
4,497,293	-		DZA65_RS20840	0.58	-0.3
4,497,356	+		DZA65_RS20840	0.67	-0.6
4,497,356	+		DZA65_RS20840	0.67	-0.1
4,497,558	-				+0.8
4,497,618	+				+0.2
4,497,618	+				+0.0
4,497,618	+				-1.6
4,497,618	+				+0.8
4,497,618	+				+0.0
4,497,618	+				+0.1
4,497,618	+				-0.2
4,497,619	-				-1.0
4,497,619	-				+0.9
4,497,619	-				+0.0
4,497,619	-				+0.2
4,497,619	-				-0.4
4,497,619	-				+1.1
4,497,638	+				+0.1
4,497,639	-				-0.2
4,497,658	+				-1.1
4,497,659	-				+0.7
4,497,659	-				-0.0
4,497,659	-				-0.3
4,497,699	+				-0.9
4,497,700	-				-2.2
4,497,700	-				+1.1
4,497,701	+				-1.6
4,497,701	+				-0.2
4,497,701	+				-2.2
4,497,701	+				-0.3
4,497,701	+				+0.9
4,497,701	+				-1.2
4,497,701	+				-1.4
4,497,702	-				+1.2
4,497,702	-				-0.8
4,497,702	-				-1.2
4,497,702	-				-1.1
4,497,702	-				-0.4
4,497,702	-				+0.3
4,497,703	+				-1.8
4,497,703	+				+0.6
4,497,703	+				-0.2
4,497,703	+				+0.3
4,497,703	+				+1.1
4,497,703	+				+0.2
4,497,703	+				-2.0
4,497,704	-				+0.9
4,497,704	-				+0.1
4,497,704	-				-0.4
4,497,704	-				+0.1
4,497,704	-				-0.4
4,497,704	-				-2.5
4,497,704	-				+0.0
4,497,704	-				+2.4
4,497,704	-				+1.4
4,497,704	-				+0.9
4,497,704	-				+0.4
4,497,704	-				-0.8
4,497,704	-				-1.0
4,497,704	-				-1.8
4,497,704	-				+1.1
4,497,704	-				+1.0
4,497,708	+				+1.0
4,497,739	-				+0.3
4,497,739	-				-0.4
4,497,739	-				+0.6
4,497,745	+				-1.1
4,497,745	+				-1.6
4,497,745	+				-0.9
4,497,745	+				-0.6
4,497,745	+				+0.1
4,497,745	+				+0.2
4,497,745	+				-0.5
4,497,746	-				-0.7
4,497,746	-				+0.5
4,497,746	-				-0.0
4,497,746	-				+0.2
4,497,746	-				-1.0
4,497,746	-				-0.1
4,497,746	-				-0.7
4,497,746	-				-0.6
4,497,805	+				-1.0
4,497,805	+				-0.9
4,497,806	-				+0.4
4,497,810	+				-1.3
4,497,810	+				-0.4
4,497,810	+				+0.3
4,497,810	+				+0.1
4,497,811	-				-0.8
4,497,811	-				+1.2
4,497,828	+				+0.4
4,497,828	+				-1.8
4,497,828	+				-2.0
4,497,828	+				+0.7
4,497,829	-				+0.9
4,497,829	-				+0.9
4,497,831	-				+0.4
4,497,840	-				-0.0
4,497,848	+				-0.3
4,497,848	+				-0.7
4,497,849	-				+1.0
4,497,849	-				-0.3
4,497,849	-				+0.0
4,497,866	-				-0.9
4,497,866	-				+0.0