Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS20555

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,434,337	-				-1.5
4,434,415	-				-0.0
4,434,415	-				+0.1
4,434,416	+				-0.8
4,434,433	-				-1.6
4,434,465	-		DZA65_RS20545	0.12	-0.7
4,434,481	+		DZA65_RS20545	0.17	-0.5
4,434,483	+		DZA65_RS20545	0.18	+0.2
4,434,483	+		DZA65_RS20545	0.18	-1.8
4,434,494	+		DZA65_RS20545	0.22	-0.3
4,434,522	-		DZA65_RS20545	0.32	-2.8
4,434,555	+		DZA65_RS20545	0.43	-2.2
4,434,709	+				-2.0
4,434,709	+				-0.8
4,434,709	+				-0.1
4,434,710	-				-0.4
4,434,710	-				-1.5
4,434,748	-				-1.5
4,434,752	+				-2.0
4,434,752	+				-1.5
4,434,753	-				-1.0
4,434,753	-				-3.4
4,434,756	+				-1.3
4,434,756	+				-1.0
4,434,756	+				-1.5
4,434,757	-				-2.9
4,434,757	-				-2.5
4,434,860	+		DZA65_RS20550	0.36	-2.9
4,434,860	+		DZA65_RS20550	0.36	-1.0
4,434,861	-		DZA65_RS20550	0.36	-1.2
4,434,861	-		DZA65_RS20550	0.36	-1.9
4,434,879	-		DZA65_RS20550	0.41	-1.5
4,434,879	-		DZA65_RS20550	0.41	-0.7
4,434,906	+		DZA65_RS20550	0.49	-1.0
4,434,907	-		DZA65_RS20550	0.49	-1.6
4,434,907	-		DZA65_RS20550	0.49	-1.6
4,435,173	-		DZA65_RS20555	0.17	+0.3
4,435,206	+		DZA65_RS20555	0.25	-2.3
4,435,206	+		DZA65_RS20555	0.25	-1.0
4,435,206	+		DZA65_RS20555	0.25	-0.0
4,435,206	+		DZA65_RS20555	0.25	-2.3
4,435,206	+		DZA65_RS20555	0.25	-2.4
4,435,375	+		DZA65_RS20555	0.69	-1.8
4,435,486	+				-1.5
4,435,491	+				-2.9
4,435,491	+				-0.2
4,435,492	-				-0.5
4,435,492	-				-2.0
4,435,492	-				-0.2
4,435,492	-				-0.0
4,435,492	-				-1.9
4,435,492	-				-1.5
4,435,492	-				-1.6
4,435,492	-				+0.0
4,435,492	-				-0.5
4,435,492	-				+0.2
4,435,498	-				-1.3
4,435,542	+				-1.6
4,435,542	+				-1.0
4,435,542	+				+0.3
4,435,542	+				-1.2
4,435,542	+				-0.8
4,435,542	+				-1.0
4,435,543	-				-2.3
4,435,543	-				+0.1
4,435,543	-				-1.5
4,435,543	-				-0.5
4,435,543	-				+0.3
4,435,549	-				-1.0
4,435,568	-				+0.3
4,435,616	-		DZA65_RS20560	0.17	-0.5
4,435,627	-		DZA65_RS20560	0.18	+0.6
4,435,627	-		DZA65_RS20560	0.18	-1.2
4,435,825	+		DZA65_RS20560	0.46	-2.3
4,435,826	-		DZA65_RS20560	0.46	-2.3
4,435,826	-		DZA65_RS20560	0.46	-0.3
4,435,826	-		DZA65_RS20560	0.46	-0.4
4,435,826	-		DZA65_RS20560	0.46	+0.4
4,435,896	-		DZA65_RS20560	0.55	-0.3
4,435,896	-		DZA65_RS20560	0.55	-0.9
4,435,920	+		DZA65_RS20560	0.59	-1.9
4,435,921	-		DZA65_RS20560	0.59	-1.0
4,436,002	+		DZA65_RS20560	0.70	-0.5
4,436,003	-		DZA65_RS20560	0.70	-1.4
4,436,125	-		DZA65_RS20560	0.87	-0.5
4,436,142	+		DZA65_RS20560	0.89	-2.5
4,436,143	-		DZA65_RS20560	0.89	-0.2
4,436,201	-				-0.6
4,436,212	+				-2.0
4,436,212	+				-1.3
4,436,213	-				-0.8
4,436,213	-				-0.5
4,436,213	-				-0.5
4,436,213	-				-0.3
4,436,213	-				-1.1
4,436,213	-				-2.3
4,436,213	-				+0.5
4,436,213	-				-1.6
4,436,213	-				+0.6
4,436,244	+				-0.6
4,436,245	-				+0.3
4,436,245	-				+0.7
4,436,245	-				+0.3
4,436,245	-				-0.1
4,436,272	+				-0.6
4,436,279	+				+0.8
4,436,279	+				-1.8
4,436,300	+				+0.7
4,436,300	+				-2.4
4,436,300	+				+0.4
4,436,301	-				-3.0
4,436,301	-				-1.5
4,436,301	-				+0.2
4,436,301	-				-1.9
4,436,331	+				-0.0
4,436,331	+				+0.4
4,436,343	-				+0.5
4,436,343	-				+1.0
4,436,343	-				+0.5
4,436,343	-				+0.8
4,436,348	-				-0.4
4,436,356	+				-0.4
4,436,356	+				-0.8
4,436,356	+				+0.7
4,436,357	-				-0.9
4,436,357	-				+0.7
4,436,357	-				+0.2
4,436,357	-				+0.2
4,436,373	+				+1.1
4,436,373	+				-0.1
4,436,373	+				-0.9
4,436,374	-				-0.1
4,436,374	-				-1.0
4,436,374	-				+0.1
4,436,374	-				+1.3
4,436,379	-				+0.1
4,436,414	-				-1.5
4,436,414	-				-0.1
4,436,446	+				-0.2
4,436,446	+				-0.2
4,436,447	-				+0.1
4,436,447	-				+0.9
4,436,447	-				+0.7
4,436,450	+				+0.4
4,436,451	-				+0.2
4,436,451	-				+0.4
4,436,451	-				-1.2
4,436,492	-				+0.2