Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS20155 and DZA65_RS20160 are separated by 86 nucleotides DZA65_RS20160 and DZA65_RS20165 are separated by 29 nucleotides
DZA65_RS20155: DZA65_RS20155 - small ribosomal subunit biogenesis GTPase RsgA, at 4,365,691 to 4,366,740
_RS20155
DZA65_RS20160: DZA65_RS20160 - phosphatidylserine decarboxylase, at 4,366,827 to 4,367,741
_RS20160
DZA65_RS20165: DZA65_RS20165 - miniconductance mechanosensitive channel MscM, at 4,367,771 to 4,371,094
_RS20165
Position (kb)
4366
4367
4368 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4366.713 kb on + strand at 4366.713 kb on + strand at 4366.714 kb on - strand at 4366.714 kb on - strand at 4366.745 kb on + strand at 4366.745 kb on + strand at 4366.745 kb on + strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.746 kb on - strand at 4366.750 kb on + strand at 4366.763 kb on + strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.764 kb on - strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.765 kb on + strand at 4366.766 kb on - strand at 4366.766 kb on - strand at 4366.799 kb on + strand at 4367.809 kb on - strand at 4367.981 kb on + strand at 4368.116 kb on - strand at 4368.147 kb on + strand, within DZA65_RS20165 at 4368.147 kb on + strand, within DZA65_RS20165 at 4368.148 kb on - strand, within DZA65_RS20165 at 4368.324 kb on + strand at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.328 kb on + strand, within DZA65_RS20165 at 4368.329 kb on - strand, within DZA65_RS20165 at 4368.329 kb on - strand at 4368.329 kb on - strand, within DZA65_RS20165 at 4368.329 kb on - strand, within DZA65_RS20165 at 4368.329 kb on - strand, within DZA65_RS20165 at 4368.450 kb on + strand, within DZA65_RS20165 at 4368.450 kb on + strand, within DZA65_RS20165
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,366,713 + -1.5 4,366,713 + -0.6 4,366,714 - -0.6 4,366,714 - +0.0 4,366,745 + -0.5 4,366,745 + +1.3 4,366,745 + -0.5 4,366,746 - -1.8 4,366,746 - -1.0 4,366,746 - -1.6 4,366,746 - -0.1 4,366,746 - -0.7 4,366,746 - +0.1 4,366,746 - -1.3 4,366,750 + +0.9 4,366,763 + +0.1 4,366,764 - -0.5 4,366,764 - -0.7 4,366,764 - +0.3 4,366,764 - +2.0 4,366,765 + -1.6 4,366,765 + -2.4 4,366,765 + +1.1 4,366,765 + -1.2 4,366,765 + +0.1 4,366,765 + +1.0 4,366,766 - -0.8 4,366,766 - -0.2 4,366,799 + -1.3 4,367,809 - -0.1 4,367,981 + +1.1 4,368,116 - +1.5 4,368,147 + DZA65_RS20165 0.11 +0.5 4,368,147 + DZA65_RS20165 0.11 +0.5 4,368,148 - DZA65_RS20165 0.11 -0.7 4,368,324 + +0.1 4,368,328 + DZA65_RS20165 0.17 +0.1 4,368,328 + DZA65_RS20165 0.17 -0.1 4,368,328 + DZA65_RS20165 0.17 -0.3 4,368,328 + DZA65_RS20165 0.17 +0.5 4,368,328 + DZA65_RS20165 0.17 -0.2 4,368,328 + DZA65_RS20165 0.17 -0.8 4,368,328 + DZA65_RS20165 0.17 -0.5 4,368,328 + DZA65_RS20165 0.17 +0.5 4,368,329 - DZA65_RS20165 0.17 -0.4 4,368,329 - +1.3 4,368,329 - DZA65_RS20165 0.17 +1.1 4,368,329 - DZA65_RS20165 0.17 -0.3 4,368,329 - DZA65_RS20165 0.17 +0.5 4,368,450 + DZA65_RS20165 0.20 -0.2 4,368,450 + DZA65_RS20165 0.20 -0.9
Or see this region's nucleotide sequence