Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18730

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,037,961	+				+0.5
4,037,961	+				+1.0
4,037,961	+				-1.5
4,038,000	+				-0.2
4,038,021	+				+0.1
4,038,039	+				+0.1
4,038,039	+				+1.2
4,038,040	-				-1.1
4,038,040	-				-2.2
4,038,065	+				-0.5
4,038,091	+				+0.1
4,038,091	+				-0.5
4,038,091	+				+0.1
4,038,092	-				-0.9
4,038,143	+				-0.1
4,038,143	+				+0.1
4,038,159	+				-1.1
4,038,160	-				+0.8
4,038,193	-				+0.1
4,038,229	+				+0.2
4,038,229	+				-0.7
4,038,229	+				-0.5
4,038,229	+				+0.1
4,038,229	+				-0.4
4,038,229	+				-0.9
4,038,229	+				-0.5
4,038,230	-				-1.9
4,038,235	+				-0.4
4,038,235	+				-0.4
4,038,235	+				-0.0
4,038,236	-				-2.2
4,038,236	-				-1.5
4,038,236	-				-0.7
4,038,322	-				-0.9
4,038,324	-				+0.6
4,038,327	+				+0.5
4,038,382	+				-1.0
4,038,382	+				+0.5
4,038,382	+				-0.8
4,038,382	+				+1.2
4,038,382	+				+0.1
4,038,382	+				+2.5
4,038,382	+				-0.7
4,038,382	+				-1.3
4,038,382	+				+0.6
4,038,383	-				+1.2
4,038,383	-				+0.1
4,038,383	-				+0.6
4,038,383	-				+1.1
4,038,383	-				+0.0
4,038,383	-				+1.1
4,038,383	-				+0.5
4,038,383	-				+1.3
4,038,383	-				-0.0
4,038,383	-				-0.2
4,038,383	-				+0.2
4,038,388	+				-0.1
4,038,421	+				+1.3
4,038,422	-				-0.2
4,038,511	-				-0.9
4,038,511	-				-0.9
4,038,593	+				+0.5
4,038,594	-				-0.2
4,038,712	+				-1.1
4,038,712	+				-0.8
4,038,712	+				-0.5
4,038,712	+				-1.5
4,038,712	+				-2.3
4,038,713	-				-0.1
4,038,713	-				+0.3
4,038,713	-				-1.6
4,038,713	-				-0.5
4,038,753	-				-0.7
4,038,775	+				+0.6
4,038,775	+				+0.7
4,038,775	+				+0.3
4,038,776	-				+0.3
4,038,819	+				-0.8
4,038,820	-				-0.2
4,038,820	-				+0.8
4,038,835	+				-0.0
4,038,835	+				-0.9
4,038,836	-				-0.9
4,038,874	-				+0.1
4,038,931	-				+0.7
4,038,934	+				-0.1
4,038,934	+				-2.3
4,038,935	-				-0.2
4,038,935	-				-0.1
4,038,936	+				-1.1
4,038,940	+				+0.1
4,038,941	-				+0.1
4,038,941	-				+1.3
4,038,941	-				-0.3
4,038,969	-				+0.6
4,039,008	+				+0.3
4,039,029	+				-1.3
4,039,029	+				+1.0
4,039,029	+				-0.3
4,039,029	+				+0.2
4,039,029	+				+0.9
4,039,029	+				-1.5
4,039,030	-				-0.0
4,039,124	+		DZA65_RS18730	0.11	+0.5
4,039,124	+		DZA65_RS18730	0.11	-0.1
4,039,162	+		DZA65_RS18730	0.14	-0.9
4,039,244	+		DZA65_RS18730	0.19	-0.5
4,039,244	+		DZA65_RS18730	0.19	+0.2
4,039,257	+		DZA65_RS18730	0.19	+0.9
4,039,258	-		DZA65_RS18730	0.20	+0.9
4,039,398	+		DZA65_RS18730	0.28	+0.7
4,039,398	+		DZA65_RS18730	0.28	-0.5
4,039,398	+		DZA65_RS18730	0.28	-0.4
4,039,398	+		DZA65_RS18730	0.28	+0.1
4,039,398	+		DZA65_RS18730	0.28	+0.2
4,039,399	-		DZA65_RS18730	0.28	-1.3
4,039,417	+		DZA65_RS18730	0.29	+0.4
4,039,417	+				+0.8
4,039,418	-		DZA65_RS18730	0.29	-0.4
4,039,418	-				+0.5
4,039,418	-		DZA65_RS18730	0.29	+0.5
4,039,418	-		DZA65_RS18730	0.29	-0.8
4,039,420	-		DZA65_RS18730	0.30	-0.3
4,039,462	+		DZA65_RS18730	0.32	+1.8
4,039,462	+		DZA65_RS18730	0.32	+1.0
4,039,462	+		DZA65_RS18730	0.32	+2.8
4,039,462	+		DZA65_RS18730	0.32	+0.5
4,039,462	+				+1.1
4,039,463	-		DZA65_RS18730	0.32	+0.6
4,039,471	+		DZA65_RS18730	0.33	+0.1
4,039,471	+		DZA65_RS18730	0.33	-0.9
4,039,495	-		DZA65_RS18730	0.34	+0.8
4,039,497	+		DZA65_RS18730	0.34	+1.1
4,039,528	-		DZA65_RS18730	0.36	-2.5
4,039,552	-		DZA65_RS18730	0.38	-1.5
4,039,554	+		DZA65_RS18730	0.38	+0.2
4,039,555	-		DZA65_RS18730	0.38	-0.5
4,039,558	+		DZA65_RS18730	0.38	-0.8
4,039,559	-		DZA65_RS18730	0.38	-0.9
4,039,583	+		DZA65_RS18730	0.40	+0.7
4,039,584	-		DZA65_RS18730	0.40	-1.0
4,039,636	-		DZA65_RS18730	0.43	+2.1
4,039,636	-		DZA65_RS18730	0.43	-0.0
4,039,636	-		DZA65_RS18730	0.43	+1.0
4,039,650	+		DZA65_RS18730	0.44	-1.1
4,039,663	-		DZA65_RS18730	0.45	+1.1
4,039,663	-		DZA65_RS18730	0.45	+2.1
4,039,674	+				-0.1
4,039,674	+		DZA65_RS18730	0.45	+0.8
4,039,743	+		DZA65_RS18730	0.50	+0.5
4,039,744	-		DZA65_RS18730	0.50	+0.1
4,039,744	-		DZA65_RS18730	0.50	-0.6
4,039,747	-		DZA65_RS18730	0.50	+1.0
4,039,867	+		DZA65_RS18730	0.57	+0.2
4,039,867	+		DZA65_RS18730	0.57	-0.2
4,039,867	+		DZA65_RS18730	0.57	-0.6
4,039,867	+		DZA65_RS18730	0.57	+0.4
4,039,867	+		DZA65_RS18730	0.57	+1.1
4,039,867	+		DZA65_RS18730	0.57	-0.6
4,039,867	+		DZA65_RS18730	0.57	+0.3
4,039,867	+		DZA65_RS18730	0.57	-2.3
4,039,868	-		DZA65_RS18730	0.57	+2.2
4,039,868	-		DZA65_RS18730	0.57	+0.6
4,039,868	-		DZA65_RS18730	0.57	-0.9
4,039,868	-		DZA65_RS18730	0.57	+0.2
4,039,868	-		DZA65_RS18730	0.57	+0.4
4,039,868	-		DZA65_RS18730	0.57	+1.0
4,039,868	-		DZA65_RS18730	0.57	+0.8
4,039,911	+		DZA65_RS18730	0.60	+1.0
4,039,911	+		DZA65_RS18730	0.60	+0.8
4,039,960	+		DZA65_RS18730	0.63	+1.6
4,039,961	-		DZA65_RS18730	0.63	-0.9
4,039,961	-		DZA65_RS18730	0.63	-0.9
4,039,961	-		DZA65_RS18730	0.63	+0.2
4,039,961	-		DZA65_RS18730	0.63	-0.6
4,039,979	+		DZA65_RS18730	0.64	-0.7
4,039,980	-		DZA65_RS18730	0.64	-0.0
4,039,980	-		DZA65_RS18730	0.64	+0.2
4,039,980	-		DZA65_RS18730	0.64	-1.3
4,040,016	+		DZA65_RS18730	0.67	+0.6
4,040,016	+		DZA65_RS18730	0.67	-0.6
4,040,017	-				-1.5
4,040,023	-		DZA65_RS18730	0.67	+0.2
4,040,023	-		DZA65_RS18730	0.67	-0.1
4,040,085	+		DZA65_RS18730	0.71	-0.5
4,040,085	+		DZA65_RS18730	0.71	-1.2
4,040,085	+		DZA65_RS18730	0.71	-1.6
4,040,085	+		DZA65_RS18730	0.71	-1.1
4,040,086	-		DZA65_RS18730	0.71	+0.5
4,040,119	+		DZA65_RS18730	0.73	+1.6
4,040,119	+		DZA65_RS18730	0.73	+1.2
4,040,122	-		DZA65_RS18730	0.73	+0.7
4,040,122	-		DZA65_RS18730	0.73	-0.9
4,040,308	-		DZA65_RS18730	0.85	+1.1
4,040,365	+		DZA65_RS18730	0.88	-0.6
4,040,365	+		DZA65_RS18730	0.88	+1.9
4,040,365	+		DZA65_RS18730	0.88	+0.8
4,040,365	+		DZA65_RS18730	0.88	-1.1
4,040,365	+		DZA65_RS18730	0.88	-0.9
4,040,365	+		DZA65_RS18730	0.88	+0.2
4,040,365	+		DZA65_RS18730	0.88	-0.9
4,040,365	+		DZA65_RS18730	0.88	+0.2
4,040,365	+		DZA65_RS18730	0.88	+0.5
4,040,366	-		DZA65_RS18730	0.88	+0.1
4,040,366	-		DZA65_RS18730	0.88	+0.8
4,040,366	-		DZA65_RS18730	0.88	+1.3
4,040,366	-		DZA65_RS18730	0.88	+0.5
4,040,366	-		DZA65_RS18730	0.88	+0.7
4,040,366	-		DZA65_RS18730	0.88	-2.5
4,040,366	-		DZA65_RS18730	0.88	-0.4
4,040,367	+		DZA65_RS18730	0.88	-1.5
4,040,367	+		DZA65_RS18730	0.88	+0.1
4,040,367	+		DZA65_RS18730	0.88	+0.7
4,040,367	+		DZA65_RS18730	0.88	-1.9
4,040,367	+		DZA65_RS18730	0.88	-0.5
4,040,368	-		DZA65_RS18730	0.88	-0.8
4,040,368	-		DZA65_RS18730	0.88	-0.2
4,040,368	-		DZA65_RS18730	0.88	-0.2
4,040,368	-		DZA65_RS18730	0.88	-3.1
4,040,368	-		DZA65_RS18730	0.88	-0.3
4,040,476	+				+1.0
4,040,476	+				+0.3
4,040,477	-				-0.3
4,040,477	-				-1.1
4,040,477	-				+2.3
4,040,477	-				+1.0
4,040,477	-				-0.3
4,040,519	-				+0.0
4,040,519	-				-0.8
4,040,519	-				+1.6
4,040,551	+				-0.4
4,040,551	+				+0.3
4,040,551	+				+1.2
4,040,551	+				-0.9
4,040,551	+				-0.5
4,040,551	+				-0.2
4,040,552	-				+0.8
4,040,570	+				+0.3
4,040,570	+				+0.4
4,040,570	+				+0.1
4,040,570	+				+0.1
4,040,571	-				-0.4
4,040,589	+				+0.5
4,040,589	+				-1.7
4,040,590	-				+0.0
4,040,590	-				-0.1
4,040,602	+				-1.8
4,040,603	-				+0.1
4,040,625	+				+0.9
4,040,625	+				-0.5
4,040,626	-				-1.8
4,040,675	+				-0.4
4,040,820	+				-2.3
4,040,821	-				+0.1
4,040,821	-				+0.8
4,040,821	-				+0.3
4,040,821	-				-0.7
4,040,821	-				+0.1
4,040,943	+				+0.5
4,040,943	+				+0.3
4,040,943	+				-0.2
4,040,944	-				+0.1
4,040,944	-				-0.2
4,040,945	+				+0.6
4,040,945	+				-1.3
4,040,945	+				+0.1
4,040,945	+				+0.6
4,040,945	+				+1.3
4,040,945	+				+0.5
4,040,945	+				-0.9
4,040,946	-				-0.3
4,040,946	-				+0.7
4,040,946	-				+2.1
4,040,946	-				-0.5
4,040,946	-				+0.6
4,040,946	-				-2.0
4,040,946	-				+0.6
4,041,047	+		DZA65_RS18735	0.13	+0.1
4,041,047	+		DZA65_RS18735	0.13	+0.5
4,041,047	+		DZA65_RS18735	0.13	-0.5
4,041,048	-		DZA65_RS18735	0.13	+0.4
4,041,048	-		DZA65_RS18735	0.13	+0.1
4,041,048	-		DZA65_RS18735	0.13	-1.1
4,041,048	-		DZA65_RS18735	0.13	+0.7
4,041,048	-		DZA65_RS18735	0.13	+1.2
4,041,048	-		DZA65_RS18735	0.13	-0.3
4,041,048	-		DZA65_RS18735	0.13	-0.2
4,041,077	-		DZA65_RS18735	0.14	+0.2
4,041,077	-		DZA65_RS18735	0.14	+0.2
4,041,077	-		DZA65_RS18735	0.14	+0.3
4,041,081	+		DZA65_RS18735	0.14	-2.5
4,041,130	-		DZA65_RS18735	0.16	+0.5
4,041,167	+		DZA65_RS18735	0.17	-0.8
4,041,167	+		DZA65_RS18735	0.17	-0.2
4,041,167	+		DZA65_RS18735	0.17	+0.1
4,041,167	+		DZA65_RS18735	0.17	+1.1
4,041,167	+		DZA65_RS18735	0.17	-0.8
4,041,168	-		DZA65_RS18735	0.17	-0.6
4,041,168	-		DZA65_RS18735	0.17	+0.5
4,041,168	-		DZA65_RS18735	0.17	+0.8
4,041,171	+				+1.5
4,041,172	-		DZA65_RS18735	0.18	-2.1
4,041,172	-		DZA65_RS18735	0.18	-0.5
4,041,172	-		DZA65_RS18735	0.18	-0.1
4,041,172	-		DZA65_RS18735	0.18	+0.7
4,041,194	+		DZA65_RS18735	0.18	+0.5
4,041,194	+		DZA65_RS18735	0.18	+1.4
4,041,194	+		DZA65_RS18735	0.18	+0.3
4,041,194	+		DZA65_RS18735	0.18	-1.3
4,041,194	+		DZA65_RS18735	0.18	-1.9
4,041,195	-		DZA65_RS18735	0.18	+0.7
4,041,195	-		DZA65_RS18735	0.18	-1.9
4,041,227	+		DZA65_RS18735	0.20	-0.2
4,041,227	+		DZA65_RS18735	0.20	+0.5
4,041,227	+		DZA65_RS18735	0.20	+0.6
4,041,228	-		DZA65_RS18735	0.20	-0.8
4,041,228	-		DZA65_RS18735	0.20	+0.5
4,041,228	-		DZA65_RS18735	0.20	-0.5
4,041,228	-		DZA65_RS18735	0.20	+0.9
4,041,228	-		DZA65_RS18735	0.20	-0.1
4,041,228	-		DZA65_RS18735	0.20	+0.5
4,041,228	-		DZA65_RS18735	0.20	+0.4
4,041,228	-		DZA65_RS18735	0.20	-0.5
4,041,228	-		DZA65_RS18735	0.20	+0.6
4,041,228	-		DZA65_RS18735	0.20	-0.1
4,041,232	-		DZA65_RS18735	0.20	-0.2
4,041,262	-		DZA65_RS18735	0.21	+0.5
4,041,307	-		DZA65_RS18735	0.22	+0.5
4,041,307	-		DZA65_RS18735	0.22	-0.4
4,041,327	+		DZA65_RS18735	0.23	-0.4
4,041,327	+		DZA65_RS18735	0.23	-0.4
4,041,328	-		DZA65_RS18735	0.23	-0.4
4,041,328	-		DZA65_RS18735	0.23	-2.1
4,041,329	+		DZA65_RS18735	0.23	-0.2
4,041,329	+		DZA65_RS18735	0.23	-0.8
4,041,329	+		DZA65_RS18735	0.23	+1.1
4,041,329	+		DZA65_RS18735	0.23	-0.5
4,041,329	+		DZA65_RS18735	0.23	-1.0
4,041,329	+		DZA65_RS18735	0.23	-0.1
4,041,330	-		DZA65_RS18735	0.23	+0.2
4,041,330	-		DZA65_RS18735	0.23	-2.1
4,041,330	-		DZA65_RS18735	0.23	-0.3
4,041,396	-		DZA65_RS18735	0.25	+1.0
4,041,396	-		DZA65_RS18735	0.25	-0.5
4,041,396	-		DZA65_RS18735	0.25	+1.1
4,041,520	-		DZA65_RS18735	0.30	-0.4