Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16985

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,667,151	-				+0.4
3,667,254	-				-1.0
3,667,254	-				-0.3
3,667,254	-				+0.4
3,667,259	-				-2.2
3,667,259	-				+0.9
3,667,259	-				+0.0
3,667,307	+				+2.0
3,667,308	-				-0.9
3,667,308	-				-0.2
3,667,317	-				+0.4
3,667,348	+				+0.2
3,667,349	-				-1.6
3,667,352	+				+0.7
3,667,353	-				+0.7
3,667,367	-				+0.1
3,667,373	-				-2.4
3,667,373	-				-1.1
3,667,373	-				-1.4
3,667,549	+				-1.4
3,667,555	+				-0.4
3,667,555	+				-0.7
3,667,663	-		DZA65_RS16990	0.11	-0.3
3,667,752	+				+0.4
3,667,752	+				-0.4
3,667,752	+				+1.0
3,667,754	+				-0.3
3,667,755	-				+0.7
3,667,769	+				-0.7
3,667,780	+				+0.4
3,667,781	-				+0.2
3,667,795	+				+0.2
3,667,795	+				-0.1
3,667,795	+				-0.4
3,667,796	-				+0.8
3,667,798	+				+0.3
3,667,817	+				+1.6
3,667,817	+				-2.4
3,667,818	-				-1.7
3,667,834	-				-0.3
3,667,958	-				+0.8
3,667,980	+				-1.0
3,667,980	+				-0.2
3,667,980	+				+0.4
3,667,980	+				+1.0
3,667,981	-				+1.5
3,667,981	-				+0.2
3,667,981	-				-0.6
3,667,999	+				-0.4
3,667,999	+				-0.6
3,668,055	-				-0.6
3,668,055	-				-0.5
3,668,055	-				+0.9
3,668,081	+				-1.0
3,668,082	-				+0.2
3,668,108	-				-0.3
3,668,125	-				-0.7
3,668,129	+				-3.2
3,668,135	+				+0.5
3,668,197	-				-0.1
3,668,197	-				-0.3
3,668,204	+				+0.6
3,668,204	+				-1.0
3,668,205	-				-0.1
3,668,213	+				-2.0
3,668,221	+				+0.1
3,668,221	+				+3.0
3,668,225	-				+0.6
3,668,300	+		DZA65_RS16995	0.12	+0.2
3,668,311	-		DZA65_RS16995	0.14	+0.1
3,668,312	+		DZA65_RS16995	0.14	-0.6
3,668,313	-		DZA65_RS16995	0.14	+0.7
3,668,313	-		DZA65_RS16995	0.14	-1.2
3,668,313	-		DZA65_RS16995	0.14	+1.1
3,668,341	+		DZA65_RS16995	0.19	-1.3
3,668,341	+		DZA65_RS16995	0.19	-1.9
3,668,348	-		DZA65_RS16995	0.20	+1.4
3,668,389	+		DZA65_RS16995	0.27	+0.4
3,668,390	-		DZA65_RS16995	0.27	-1.6
3,668,409	-		DZA65_RS16995	0.30	+1.0
3,668,426	+		DZA65_RS16995	0.33	+0.6
3,668,513	+		DZA65_RS16995	0.47	+0.4
3,668,514	-		DZA65_RS16995	0.47	+0.0
3,668,514	-		DZA65_RS16995	0.47	+0.6
3,668,514	-		DZA65_RS16995	0.47	+0.5
3,668,537	+		DZA65_RS16995	0.51	-0.1
3,668,537	+		DZA65_RS16995	0.51	-0.1
3,668,537	+		DZA65_RS16995	0.51	+0.1
3,668,538	-		DZA65_RS16995	0.51	-1.0
3,668,538	-		DZA65_RS16995	0.51	+0.8
3,668,544	-		DZA65_RS16995	0.52	-0.5
3,668,581	+		DZA65_RS16995	0.58	+0.0
3,668,592	-		DZA65_RS16995	0.60	+0.1
3,668,597	+		DZA65_RS16995	0.61	+1.2
3,668,620	-		DZA65_RS16995	0.65	-1.9
3,668,620	-		DZA65_RS16995	0.65	+0.7