Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,480,308	+		DZA65_RS16045	0.54	-1.3
3,480,309	-		DZA65_RS16045	0.54	+1.0
3,480,837	-		DZA65_RS16045	0.79	-1.2
3,480,925	+		DZA65_RS16045	0.84	-1.8
3,481,220	+				-2.1
3,481,220	+				-0.4
3,481,220	+				-1.2
3,481,220	+				-0.6
3,481,220	+				-2.4
3,481,220	+				-1.0
3,481,221	-				-0.1
3,481,221	-				+0.2
3,481,221	-				+3.7
3,481,221	-				-0.6
3,481,221	-				+0.0
3,481,221	-				-1.2
3,481,221	-				-1.0
3,481,222	-				-0.2
3,481,226	+				-0.6
3,481,228	+				-0.6
3,481,229	-				+0.8
3,481,229	-				-0.6
3,481,283	+				-0.8
3,481,283	+				+0.6
3,481,348	+				+0.6
3,481,349	-				-0.2
3,481,535	+		DZA65_RS16050	0.17	+0.8
3,481,535	+		DZA65_RS16050	0.17	-0.6
3,481,536	-		DZA65_RS16050	0.17	-1.6
3,481,595	+		DZA65_RS16050	0.21	+0.7
3,481,595	+		DZA65_RS16050	0.21	-0.2
3,481,596	-		DZA65_RS16050	0.21	+0.1
3,481,596	-		DZA65_RS16050	0.21	+0.5
3,481,596	-		DZA65_RS16050	0.21	-0.5
3,481,686	-		DZA65_RS16050	0.27	-2.6
3,481,885	-		DZA65_RS16050	0.40	-1.3
3,481,885	-		DZA65_RS16050	0.40	-0.0
3,481,889	+		DZA65_RS16050	0.41	+0.2
3,481,889	+		DZA65_RS16050	0.41	-2.6
3,481,889	+		DZA65_RS16050	0.41	+0.4
3,481,890	-		DZA65_RS16050	0.41	-1.0
3,481,890	-		DZA65_RS16050	0.41	+0.6
3,481,890	-		DZA65_RS16050	0.41	-0.9
3,481,890	-		DZA65_RS16050	0.41	-0.6
3,481,890	-		DZA65_RS16050	0.41	-0.9
3,481,893	+		DZA65_RS16050	0.41	+0.4
3,481,893	+		DZA65_RS16050	0.41	-0.6
3,481,894	-				+1.0
3,481,894	-		DZA65_RS16050	0.41	-0.3
3,481,905	+		DZA65_RS16050	0.42	-0.3
3,481,905	+		DZA65_RS16050	0.42	-1.9
3,481,906	-		DZA65_RS16050	0.42	+0.4
3,481,906	-		DZA65_RS16050	0.42	+0.2
3,482,081	-		DZA65_RS16050	0.53	+1.4
3,482,105	-		DZA65_RS16050	0.55	+0.2
3,482,105	-		DZA65_RS16050	0.55	+0.8
3,482,248	-		DZA65_RS16050	0.64	-0.5
3,482,270	+		DZA65_RS16050	0.65	-1.1
3,482,302	-		DZA65_RS16050	0.68	-0.8
3,482,405	+		DZA65_RS16050	0.74	-0.6
3,482,482	+		DZA65_RS16050	0.79	+0.2
3,482,482	+		DZA65_RS16050	0.79	-0.5
3,482,483	-		DZA65_RS16050	0.79	-1.4
3,482,566	-		DZA65_RS16050	0.85	-0.8
3,482,566	-		DZA65_RS16050	0.85	-0.9
3,482,824	+				+0.2
3,482,824	+				-0.2
3,482,824	+				-1.0
3,482,824	+				-0.3
3,482,825	-				+0.8
3,482,825	-				-0.1
3,482,825	-				-1.3
3,482,845	+				-0.2
3,482,845	+				+0.1
3,482,845	+				-0.7
3,482,845	+				-0.4
3,482,845	+				-0.5
3,482,846	-				+0.7
3,482,846	-				-2.1
3,482,848	+				-0.4
3,482,889	+				-0.3
3,482,971	+				-0.1
3,482,972	-				-0.3
3,482,972	-				-0.3
3,482,976	+				+0.4
3,483,042	+		DZA65_RS16055	0.12	+0.4
3,483,042	+		DZA65_RS16055	0.12	-0.3
3,483,090	+		DZA65_RS16055	0.33	+0.3
3,483,091	-		DZA65_RS16055	0.34	-0.7
3,483,091	-		DZA65_RS16055	0.34	-2.8
3,483,091	-		DZA65_RS16055	0.34	-0.1
3,483,091	-		DZA65_RS16055	0.34	-0.6
3,483,100	+		DZA65_RS16055	0.38	+1.2
3,483,100	+		DZA65_RS16055	0.38	-0.3
3,483,101	-		DZA65_RS16055	0.38	+0.1
3,483,101	-		DZA65_RS16055	0.38	+0.5
3,483,106	+		DZA65_RS16055	0.40	+0.2
3,483,106	+		DZA65_RS16055	0.40	+0.1
3,483,106	+		DZA65_RS16055	0.40	+0.1
3,483,239	+				+0.1
3,483,239	+				+0.6
3,483,240	-				-0.6
3,483,240	-				-2.4
3,483,289	+				-0.1
3,483,290	-				+0.4
3,483,290	-				-0.4
3,483,351	+				-1.2
3,483,368	+				+0.7
3,483,368	+				+1.2
3,483,368	+				+0.9
3,483,368	+				+0.7
3,483,368	+				-0.8
3,483,369	-				-0.7
3,483,369	-				+0.4
3,483,369	-				+1.9
3,483,369	-				-0.5
3,483,386	+				-0.3
3,483,386	+				+1.6
3,483,387	-				-0.5
3,483,387	-				-1.4
3,483,388	+				+0.5
3,483,388	+				-0.2
3,483,388	+				+0.5
3,483,388	+				-0.1
3,483,389	-				-1.9
3,483,408	-				-2.1
3,483,539	+		DZA65_RS16060	0.42	+1.2
3,483,539	+		DZA65_RS16060	0.42	+0.3
3,483,540	-		DZA65_RS16060	0.42	+0.1
3,483,609	+		DZA65_RS16060	0.68	+0.8
3,483,609	+		DZA65_RS16060	0.68	+0.7
3,483,657	-		DZA65_RS16060	0.86	-0.1
3,483,657	-		DZA65_RS16060	0.86	+0.4
3,483,687	+				-0.9
3,483,741	+				+0.2
3,483,741	+				+0.1
3,483,741	+				-1.3
3,483,741	+				+0.1
3,483,741	+				+0.1
3,483,742	-				+0.2
3,483,742	-				-0.2
3,483,742	-				+0.9
3,483,742	-				-0.8
3,483,746	+				-0.9
3,483,747	-				-0.4