Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14805

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,225,677	+		DZA65_RS14800	0.40	-1.0
3,225,677	+		DZA65_RS14800	0.40	-1.7
3,225,677	+		DZA65_RS14800	0.40	+0.6
3,225,677	+		DZA65_RS14800	0.40	-0.3
3,225,677	+		DZA65_RS14800	0.40	-2.3
3,225,678	-		DZA65_RS14800	0.40	+0.3
3,225,727	+		DZA65_RS14800	0.45	-0.8
3,225,727	+		DZA65_RS14800	0.45	-0.3
3,225,728	-		DZA65_RS14800	0.45	-0.4
3,225,728	-		DZA65_RS14800	0.45	-0.2
3,225,728	-		DZA65_RS14800	0.45	+0.1
3,225,728	-		DZA65_RS14800	0.45	+0.2
3,225,784	+		DZA65_RS14800	0.51	+0.2
3,225,785	-		DZA65_RS14800	0.51	+0.5
3,225,785	-		DZA65_RS14800	0.51	+1.0
3,225,794	-		DZA65_RS14800	0.52	+2.1
3,225,794	-		DZA65_RS14800	0.52	-0.4
3,225,794	-		DZA65_RS14800	0.52	+1.3
3,225,794	-		DZA65_RS14800	0.52	+0.0
3,225,831	+		DZA65_RS14800	0.56	+0.0
3,225,831	+		DZA65_RS14800	0.56	+0.3
3,225,832	-		DZA65_RS14800	0.56	+0.0
3,225,832	-		DZA65_RS14800	0.56	-1.3
3,225,907	-		DZA65_RS14800	0.64	-0.9
3,226,009	+		DZA65_RS14800	0.74	-2.0
3,226,023	+		DZA65_RS14800	0.75	+0.3
3,226,023	+		DZA65_RS14800	0.75	-0.7
3,226,023	+		DZA65_RS14800	0.75	+0.0
3,226,023	+		DZA65_RS14800	0.75	-1.3
3,226,024	-		DZA65_RS14800	0.76	-0.0
3,226,024	-		DZA65_RS14800	0.76	-0.2
3,226,024	-		DZA65_RS14800	0.76	+0.5
3,226,024	-		DZA65_RS14800	0.76	+1.6
3,226,024	-		DZA65_RS14800	0.76	-1.7
3,226,027	+		DZA65_RS14800	0.76	-0.1
3,226,027	+		DZA65_RS14800	0.76	-0.3
3,226,027	+		DZA65_RS14800	0.76	+0.9
3,226,028	-		DZA65_RS14800	0.76	+0.1
3,226,028	-		DZA65_RS14800	0.76	-1.0
3,226,028	-		DZA65_RS14800	0.76	-1.1
3,226,030	+		DZA65_RS14800	0.76	+0.6
3,226,031	-		DZA65_RS14800	0.76	+0.0
3,226,031	-		DZA65_RS14800	0.76	+0.8
3,226,138	+		DZA65_RS14800	0.87	+0.3
3,226,145	-		DZA65_RS14800	0.88	+1.3
3,226,168	+				-2.5
3,226,227	+				+0.3
3,226,228	-				-0.8
3,226,241	-				-0.2
3,226,249	+				-0.5
3,226,252	+				-0.3
3,226,268	-				-1.3
3,226,281	+				+0.3
3,226,282	-				+0.0
3,226,371	+				-0.3
3,226,371	+				-0.7
3,226,371	+				-1.4
3,226,372	-				-0.4
3,226,372	-				-1.0
3,226,507	+				+0.6
3,226,536	+				-0.3
3,226,549	-				+0.2
3,226,554	+				-0.7
3,226,558	+				+0.0
3,226,558	+				-0.7
3,226,558	+				-3.0
3,226,595	+				+0.1
3,226,610	+				-0.5
3,226,610	+				+0.7
3,226,611	-				+0.3
3,226,669	+				+0.4
3,226,670	-				-3.1
3,226,801	+		DZA65_RS14805	0.14	-0.4
3,226,801	+		DZA65_RS14805	0.14	-0.4
3,226,801	+		DZA65_RS14805	0.14	-0.2
3,226,802	-		DZA65_RS14805	0.14	-0.2
3,226,802	-		DZA65_RS14805	0.14	-1.8
3,226,816	+		DZA65_RS14805	0.16	-0.7
3,226,817	-		DZA65_RS14805	0.16	-1.0
3,226,817	-		DZA65_RS14805	0.16	-2.3
3,226,817	-		DZA65_RS14805	0.16	-1.3
3,226,817	-		DZA65_RS14805	0.16	+0.7
3,226,880	-		DZA65_RS14805	0.23	-0.8
3,226,907	+		DZA65_RS14805	0.26	-0.4
3,226,907	+		DZA65_RS14805	0.26	+0.0
3,226,908	-		DZA65_RS14805	0.26	-0.5
3,226,908	-		DZA65_RS14805	0.26	+0.5
3,226,908	-		DZA65_RS14805	0.26	-1.8
3,226,928	+		DZA65_RS14805	0.28	-0.8
3,226,928	+		DZA65_RS14805	0.28	+0.9
3,226,928	+		DZA65_RS14805	0.28	+0.7
3,226,928	+		DZA65_RS14805	0.28	+1.1
3,226,928	+				+2.3
3,226,929	-		DZA65_RS14805	0.28	-0.8
3,226,929	-		DZA65_RS14805	0.28	-0.7
3,226,929	-		DZA65_RS14805	0.28	-1.1
3,226,929	-		DZA65_RS14805	0.28	+0.0
3,227,012	+		DZA65_RS14805	0.37	-0.4
3,227,012	+		DZA65_RS14805	0.37	+0.3
3,227,013	-		DZA65_RS14805	0.37	-0.2
3,227,013	-		DZA65_RS14805	0.37	-0.4
3,227,150	+		DZA65_RS14805	0.52	-0.5
3,227,150	+		DZA65_RS14805	0.52	-0.4
3,227,277	+		DZA65_RS14805	0.66	-1.1
3,227,277	+		DZA65_RS14805	0.66	+0.3
3,227,278	-		DZA65_RS14805	0.66	-1.1
3,227,278	-		DZA65_RS14805	0.66	+0.3
3,227,285	+		DZA65_RS14805	0.67	-1.5
3,227,285	+		DZA65_RS14805	0.67	+0.6
3,227,286	-		DZA65_RS14805	0.67	+0.0
3,227,286	-		DZA65_RS14805	0.67	+1.6
3,227,342	+		DZA65_RS14805	0.73	+0.0
3,227,342	+		DZA65_RS14805	0.73	+0.3
3,227,342	+		DZA65_RS14805	0.73	+0.6
3,227,434	+		DZA65_RS14805	0.83	-0.3
3,227,435	-		DZA65_RS14805	0.83	-0.8
3,227,491	+		DZA65_RS14805	0.89	+0.3
3,227,582	+				+0.6
3,227,583	-				+1.1
3,227,583	-				+0.5
3,227,588	+				+0.2
3,227,588	+				+0.3
3,227,589	-				+0.2
3,227,589	-				+1.3
3,227,614	-				-0.8
3,227,640	-				-0.3
3,227,672	+				-2.1
3,227,680	+				+1.3
3,227,681	-				+0.3
3,227,693	-				-0.3
3,227,693	-				-0.1
3,227,693	-				-1.3
3,227,809	+				-1.9
3,227,809	+				-1.0
3,227,809	+				-0.2
3,227,810	-				+0.3
3,227,810	-				-0.1
3,227,811	+				+0.7
3,227,811	+				-0.0
3,227,811	+				-0.7
3,227,811	+				+0.1
3,227,812	-				+1.0
3,227,812	-				-0.6
3,227,812	-				-0.1
3,227,812	-				-0.1
3,227,817	+				-2.0
3,227,817	+				+0.3
3,227,817	+				+0.5
3,227,818	-				+0.5
3,227,818	-				+1.5
3,227,818	-				-0.4
3,227,818	-				+0.3
3,227,820	+				+0.7
3,227,821	-				+0.1
3,227,922	+				-0.3
3,227,922	+				+0.5
3,227,922	+				-1.0
3,227,922	+				-0.4
3,227,922	+				-0.0
3,227,922	+				-2.1
3,227,923	-				-0.3
3,227,923	-				+0.8
3,227,923	-				+1.6
3,227,926	+				-0.7
3,227,926	+				-1.0
3,227,926	+				-1.1
3,227,926	+				-1.1
3,227,926	+				+0.1
3,227,926	+				-0.5
3,227,926	+				+0.0
3,227,926	+				+0.3
3,227,926	+				-1.1
3,227,926	+				-0.5
3,227,926	+				+0.1
3,227,927	-				+0.6
3,227,927	-				+0.3
3,227,927	-				+0.0
3,227,927	-				-0.4
3,227,927	-				+0.3
3,227,927	-				+0.3
3,227,927	-				-0.1
3,227,927	-				-1.3
3,227,927	-				+2.3
3,227,927	-				-0.0
3,227,927	-				+0.1
3,227,929	-				-0.7
3,227,929	-				+0.4
3,227,929	-				-0.2
3,227,934	+				-0.3
3,227,935	-				+1.6
3,227,935	-				-0.8
3,227,935	-				+0.1
3,227,935	-				-0.3
3,227,935	-				+0.3
3,227,944	+				+1.6
3,227,945	-				-0.1
3,227,961	+				-0.3
3,227,961	+				+0.6
3,227,961	+				+0.0
3,227,961	+				-0.1
3,227,961	+				+0.1
3,227,961	+				+0.1
3,227,961	+				-0.3
3,227,961	+				-0.3
3,227,961	+				-0.6
3,227,961	+				-0.4
3,227,962	-				-0.3
3,227,962	-				+0.4
3,227,962	-				-2.4
3,227,962	-				+0.5
3,227,962	-				+1.1
3,227,962	-				-0.2
3,227,962	-				+0.9
3,227,962	-				+0.3
3,227,976	+				-1.4
3,227,976	+				-1.1
3,227,976	+				+0.7
3,227,977	-				+0.7
3,227,977	-				-0.9
3,227,977	-				+0.5
3,228,060	+				+1.3
3,228,061	-				-2.7
3,228,073	-				-0.1
3,228,177	+		DZA65_RS14810	0.16	-0.4
3,228,177	+		DZA65_RS14810	0.16	-1.5
3,228,178	-		DZA65_RS14810	0.16	-0.2
3,228,178	-		DZA65_RS14810	0.16	-0.5
3,228,178	-		DZA65_RS14810	0.16	-0.5
3,228,179	+		DZA65_RS14810	0.16	+0.2
3,228,179	+		DZA65_RS14810	0.16	-1.3
3,228,179	+		DZA65_RS14810	0.16	+0.1
3,228,179	+		DZA65_RS14810	0.16	-0.2
3,228,180	-		DZA65_RS14810	0.17	-2.5
3,228,180	-		DZA65_RS14810	0.17	+1.0
3,228,180	-		DZA65_RS14810	0.17	+0.9
3,228,180	-		DZA65_RS14810	0.17	+1.1
3,228,180	-		DZA65_RS14810	0.17	-0.1
3,228,180	-		DZA65_RS14810	0.17	-2.0
3,228,309	+		DZA65_RS14810	0.26	+1.2
3,228,310	-		DZA65_RS14810	0.27	+0.3
3,228,310	-		DZA65_RS14810	0.27	+0.7
3,228,310	-		DZA65_RS14810	0.27	-0.5
3,228,362	-		DZA65_RS14810	0.30	+0.5
3,228,362	-		DZA65_RS14810	0.30	+0.7
3,228,366	+		DZA65_RS14810	0.31	+0.7
3,228,366	+		DZA65_RS14810	0.31	+0.0
3,228,366	+		DZA65_RS14810	0.31	+1.0
3,228,366	+		DZA65_RS14810	0.31	+1.7
3,228,366	+		DZA65_RS14810	0.31	+0.0
3,228,367	-		DZA65_RS14810	0.31	+0.5
3,228,367	-		DZA65_RS14810	0.31	-0.7
3,228,367	-		DZA65_RS14810	0.31	-0.4
3,228,367	-		DZA65_RS14810	0.31	+0.5
3,228,367	-		DZA65_RS14810	0.31	-0.3
3,228,367	-		DZA65_RS14810	0.31	+0.1
3,228,367	-		DZA65_RS14810	0.31	-0.4
3,228,369	+		DZA65_RS14810	0.31	+0.5
3,228,369	+		DZA65_RS14810	0.31	-0.3
3,228,550	+		DZA65_RS14810	0.45	-0.1
3,228,551	-		DZA65_RS14810	0.45	+1.3
3,228,563	-		DZA65_RS14810	0.46	+0.7