Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13790

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,959,220	+		DZA65_RS13780	0.49	+0.5
2,959,221	-		DZA65_RS13780	0.50	-0.6
2,959,253	-		DZA65_RS13780	0.67	-0.1
2,959,315	+				+0.6
2,959,315	+				-0.3
2,959,315	+				-1.3
2,959,316	-				+1.2
2,959,325	+				-0.3
2,959,333	+				+0.2
2,959,334	-				-0.1
2,959,345	+				-1.0
2,959,345	+				-0.2
2,959,346	-				+0.1
2,959,346	-				-0.2
2,959,417	-				+0.5
2,959,446	+				-1.5
2,959,446	+				+0.2
2,959,446	+				-0.6
2,959,446	+				+0.0
2,959,446	+				+0.2
2,959,446	+				-0.1
2,959,446	+				+0.1
2,959,446	+				-0.3
2,959,447	-				-0.2
2,959,447	-				+0.1
2,959,447	-				-1.0
2,959,447	-				+0.2
2,959,447	-				+0.4
2,959,451	+				-0.3
2,959,452	-				-0.1
2,959,482	+				+0.8
2,959,483	-				+0.2
2,959,483	-				-1.9
2,959,554	+		DZA65_RS13785	0.16	+0.6
2,959,554	+		DZA65_RS13785	0.16	-0.4
2,959,554	+		DZA65_RS13785	0.16	+0.4
2,959,555	-		DZA65_RS13785	0.16	-0.0
2,959,555	-		DZA65_RS13785	0.16	+0.2
2,959,555	-		DZA65_RS13785	0.16	+0.8
2,959,555	-		DZA65_RS13785	0.16	+0.5
2,959,555	-		DZA65_RS13785	0.16	+0.2
2,959,555	-		DZA65_RS13785	0.16	-0.0
2,959,555	-		DZA65_RS13785	0.16	+1.0
2,959,555	-		DZA65_RS13785	0.16	+1.2
2,959,565	-		DZA65_RS13785	0.18	+0.3
2,959,656	+		DZA65_RS13785	0.37	-0.0
2,959,657	-		DZA65_RS13785	0.38	-1.2
2,959,684	+		DZA65_RS13785	0.43	+0.2
2,959,900	-		DZA65_RS13785	0.90	-0.3
2,959,949	-				+0.6
2,960,097	+				-0.2
2,960,097	+				-1.8
2,960,097	+				+0.2
2,960,097	+				+1.1
2,960,097	+				+0.1
2,960,097	+				-0.6
2,960,097	+				+0.8
2,960,097	+				+0.7
2,960,097	+				+0.8
2,960,098	-				-2.1
2,960,098	-				+0.9
2,960,098	-				-0.1
2,960,098	-				+1.1
2,960,098	-				-0.2
2,960,119	+				-0.8
2,960,119	+				+0.4
2,960,120	-				+0.2
2,960,120	-				-0.1
2,960,121	+				-0.1
2,960,122	-				+0.6
2,960,138	+				-0.3
2,960,203	+				+0.2
2,960,211	-				-0.1
2,960,220	+				-0.3
2,960,221	-				-2.3
2,960,265	+				+0.2
2,960,266	-				-0.8
2,960,331	+				-0.3
2,960,331	+				-0.3
2,960,331	+				-0.4
2,960,331	+				+0.2
2,960,332	-				-0.8
2,960,332	-		DZA65_RS13790	0.10	+0.6
2,960,335	-		DZA65_RS13790	0.10	+0.9
2,960,335	-		DZA65_RS13790	0.10	+0.7
2,960,358	-		DZA65_RS13790	0.11	-0.5
2,960,358	-		DZA65_RS13790	0.11	+1.0
2,960,566	+		DZA65_RS13790	0.24	-1.1
2,960,566	+		DZA65_RS13790	0.24	+0.7
2,960,567	-		DZA65_RS13790	0.24	-1.2
2,960,569	+		DZA65_RS13790	0.24	-1.3
2,960,570	-		DZA65_RS13790	0.24	-0.7
2,960,570	-		DZA65_RS13790	0.24	-0.8
2,960,570	-		DZA65_RS13790	0.24	+2.1
2,960,570	-		DZA65_RS13790	0.24	+0.6
2,960,570	-		DZA65_RS13790	0.24	-0.1
2,960,570	-		DZA65_RS13790	0.24	-1.0
2,960,577	+		DZA65_RS13790	0.24	+2.8
2,960,681	-		DZA65_RS13790	0.30	+0.2
2,960,681	-		DZA65_RS13790	0.30	+0.2
2,960,760	+		DZA65_RS13790	0.35	+0.7
2,960,760	+		DZA65_RS13790	0.35	-0.0
2,960,761	-		DZA65_RS13790	0.35	-0.8
2,960,836	+		DZA65_RS13790	0.39	-0.1
2,960,836	+		DZA65_RS13790	0.39	+0.7
2,960,840	+		DZA65_RS13790	0.39	-0.3
2,960,841	-		DZA65_RS13790	0.39	-0.3
2,960,841	-		DZA65_RS13790	0.39	-0.6
2,960,841	-		DZA65_RS13790	0.39	+0.4
2,960,841	-		DZA65_RS13790	0.39	+0.4
2,960,889	+		DZA65_RS13790	0.42	-1.3
2,960,889	+		DZA65_RS13790	0.42	+0.5
2,960,889	+				-1.8
2,960,889	+				-1.8
2,960,889	+		DZA65_RS13790	0.42	-0.8
2,960,889	+		DZA65_RS13790	0.42	-1.1
2,960,889	+		DZA65_RS13790	0.42	-0.3
2,960,889	+		DZA65_RS13790	0.42	-1.0
2,960,890	-		DZA65_RS13790	0.42	-0.3
2,960,890	-		DZA65_RS13790	0.42	+0.1
2,960,890	-		DZA65_RS13790	0.42	-1.8
2,960,890	-		DZA65_RS13790	0.42	+0.2
2,960,890	-		DZA65_RS13790	0.42	-1.3
2,960,890	-		DZA65_RS13790	0.42	-0.6
2,960,890	-		DZA65_RS13790	0.42	-0.1
2,960,890	-		DZA65_RS13790	0.42	-0.2
2,960,890	-		DZA65_RS13790	0.42	-1.0
2,960,890	-		DZA65_RS13790	0.42	-1.1
2,960,903	+		DZA65_RS13790	0.43	+0.6
2,960,903	+		DZA65_RS13790	0.43	+0.1
2,960,903	+		DZA65_RS13790	0.43	+0.4
2,960,904	-		DZA65_RS13790	0.43	-0.1
2,960,904	-		DZA65_RS13790	0.43	-0.8
2,960,971	+		DZA65_RS13790	0.47	-0.8
2,960,987	+		DZA65_RS13790	0.48	-0.4
2,961,059	+		DZA65_RS13790	0.52	-0.2
2,961,059	+		DZA65_RS13790	0.52	-1.3
2,961,059	+		DZA65_RS13790	0.52	-1.3
2,961,060	-		DZA65_RS13790	0.52	-2.3
2,961,091	+		DZA65_RS13790	0.54	+0.5
2,961,091	+		DZA65_RS13790	0.54	-0.6
2,961,091	+		DZA65_RS13790	0.54	-0.6
2,961,091	+		DZA65_RS13790	0.54	+0.2
2,961,091	+		DZA65_RS13790	0.54	+0.6
2,961,091	+		DZA65_RS13790	0.54	-2.1
2,961,091	+		DZA65_RS13790	0.54	-1.0
2,961,092	-		DZA65_RS13790	0.54	-0.2
2,961,092	-		DZA65_RS13790	0.54	-0.8
2,961,092	-		DZA65_RS13790	0.54	+0.4
2,961,092	-		DZA65_RS13790	0.54	+0.8
2,961,092	-		DZA65_RS13790	0.54	-0.1
2,961,092	-		DZA65_RS13790	0.54	-2.1
2,961,092	-		DZA65_RS13790	0.54	-1.0
2,961,092	-		DZA65_RS13790	0.54	-0.5
2,961,092	-		DZA65_RS13790	0.54	-1.0
2,961,092	-		DZA65_RS13790	0.54	-0.3
2,961,092	-		DZA65_RS13790	0.54	-0.4
2,961,131	+		DZA65_RS13790	0.56	-2.3
2,961,367	+		DZA65_RS13790	0.70	+0.2
2,961,367	+		DZA65_RS13790	0.70	-1.3
2,961,447	-		DZA65_RS13790	0.74	-1.0
2,961,447	-		DZA65_RS13790	0.74	-1.1
2,961,447	-		DZA65_RS13790	0.74	-0.7
2,961,589	+		DZA65_RS13790	0.83	-1.0
2,961,619	-		DZA65_RS13790	0.84	-0.2
2,961,619	-		DZA65_RS13790	0.84	-0.3
2,961,619	-		DZA65_RS13790	0.84	-1.1
2,961,733	+				-0.6
2,961,737	+				-1.0
2,961,737	+				-0.0
2,961,737	+				-1.3
2,961,737	+				-0.2
2,961,737	+				-1.8
2,961,737	+				+0.2
2,961,737	+				-1.2
2,961,737	+				-1.6
2,961,737	+				-1.3
2,961,738	-				-1.6
2,961,738	-				-0.0
2,961,738	-				+1.0
2,961,738	-				-0.4
2,961,738	-				-0.8
2,961,738	-				-0.8
2,961,738	-				-2.3
2,961,738	-				+0.1
2,961,738	-				+1.1
2,961,738	-				-1.6
2,961,738	-				-0.2
2,961,738	-				-0.7
2,961,771	+				-1.2
2,961,772	-				-0.3
2,961,789	-				+0.6
2,961,789	-				-0.9
2,961,789	-				+0.4
2,961,789	-				+0.5
2,962,506	+				+0.5
2,962,535	-				-0.6
2,962,535	-				+0.4
2,962,545	+				-0.8
2,962,546	-				+0.5
2,962,552	-				-0.2
2,962,552	-				+0.0
2,962,562	-				+0.9
2,962,611	+				+0.4
2,962,611	+				-2.3
2,962,612	-				+0.2
2,962,613	+				-0.6
2,962,613	+				-0.2
2,962,613	+				+0.2
2,962,613	+				-1.3
2,962,613	+				-1.3
2,962,613	+				-1.2
2,962,613	+				-1.1
2,962,613	+				-0.7
2,962,614	-				-2.2
2,962,614	-				-0.1
2,962,614	-				-0.8
2,962,614	-				-0.6
2,962,614	-				-0.8
2,962,614	-				+0.4
2,962,617	+				+0.7
2,962,617	+				+1.3
2,962,617	+				-1.1
2,962,617	+				-0.5
2,962,618	-				+0.5
2,962,618	-				-0.8
2,962,618	-				-1.5
2,962,650	+				+0.4
2,962,771	+				+1.5
2,962,774	+				+0.4
2,962,775	-				-0.7
2,962,775	-				+0.1
2,962,794	+				-0.0
2,962,795	-				-0.8
2,962,820	-				+0.2