Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13715

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,941,657	+		DZA65_RS13710	0.23	-2.8
2,941,712	+		DZA65_RS13710	0.28	-1.2
2,941,712	+		DZA65_RS13710	0.28	-0.8
2,941,712	+		DZA65_RS13710	0.28	-1.0
2,941,712	+		DZA65_RS13710	0.28	+0.2
2,941,712	+		DZA65_RS13710	0.28	-0.1
2,941,712	+		DZA65_RS13710	0.28	-0.3
2,941,713	-		DZA65_RS13710	0.28	-0.1
2,941,713	-		DZA65_RS13710	0.28	+0.2
2,941,713	-		DZA65_RS13710	0.28	-1.1
2,941,713	-		DZA65_RS13710	0.28	-1.0
2,941,789	+		DZA65_RS13710	0.35	+0.2
2,941,790	-		DZA65_RS13710	0.35	-2.9
2,941,790	-		DZA65_RS13710	0.35	+0.5
2,941,790	-		DZA65_RS13710	0.35	-0.7
2,941,953	+		DZA65_RS13710	0.51	-0.2
2,941,953	+		DZA65_RS13710	0.51	-1.0
2,941,954	-		DZA65_RS13710	0.51	+1.1
2,941,954	-		DZA65_RS13710	0.51	-1.5
2,941,954	-		DZA65_RS13710	0.51	+1.0
2,941,954	-		DZA65_RS13710	0.51	-1.9
2,941,954	-		DZA65_RS13710	0.51	+1.0
2,941,954	-		DZA65_RS13710	0.51	-0.8
2,941,954	-		DZA65_RS13710	0.51	+1.7
2,941,954	-		DZA65_RS13710	0.51	-0.1
2,941,956	+		DZA65_RS13710	0.51	-0.9
2,941,956	+		DZA65_RS13710	0.51	-1.0
2,941,956	+		DZA65_RS13710	0.51	-1.6
2,941,957	-		DZA65_RS13710	0.51	+0.1
2,941,957	-		DZA65_RS13710	0.51	-0.0
2,941,957	-		DZA65_RS13710	0.51	-1.8
2,941,978	+		DZA65_RS13710	0.53	+0.4
2,941,978	+		DZA65_RS13710	0.53	+0.6
2,941,978	+		DZA65_RS13710	0.53	-0.6
2,941,978	+		DZA65_RS13710	0.53	+0.6
2,941,978	+		DZA65_RS13710	0.53	+0.4
2,941,978	+		DZA65_RS13710	0.53	+0.4
2,941,978	+		DZA65_RS13710	0.53	+0.4
2,941,979	-		DZA65_RS13710	0.54	-0.4
2,941,979	-		DZA65_RS13710	0.54	+0.7
2,941,979	-		DZA65_RS13710	0.54	-1.0
2,941,979	-		DZA65_RS13710	0.54	-0.8
2,941,979	-		DZA65_RS13710	0.54	+0.9
2,941,979	-		DZA65_RS13710	0.54	-0.7
2,942,001	+		DZA65_RS13710	0.56	-0.2
2,942,255	-		DZA65_RS13710	0.80	+0.5
2,942,264	+		DZA65_RS13710	0.81	+0.5
2,942,264	+		DZA65_RS13710	0.81	+0.4
2,942,265	-		DZA65_RS13710	0.81	-0.2
2,942,363	+				+0.1
2,942,379	-				+0.2
2,942,498	+				+0.5
2,942,498	+				-0.7
2,942,498	+				-0.4
2,942,498	+				+0.7
2,942,498	+				+0.5
2,942,499	-				-0.1
2,942,499	-				+0.3
2,942,499	-				+0.2
2,942,499	-				+1.5
2,942,502	-				-1.4
2,942,502	-				-1.1
2,942,502	-				-2.8
2,942,513	+				-0.1
2,942,536	-				-0.8
2,942,536	-				+0.5
2,942,541	+				-1.8
2,942,541	+				+0.6
2,942,541	+				+0.3
2,942,541	+				+0.8
2,942,541	+				+0.1
2,942,541	+				-0.9
2,942,542	-				-0.4
2,942,542	-				+0.2
2,942,602	+				+0.8
2,942,602	+				-1.1
2,942,602	+				-0.9
2,942,602	+				+0.9
2,942,603	-				+0.5
2,942,603	-				-0.8
2,942,611	+				-0.7
2,942,611	+				-0.0
2,942,611	+				-1.9
2,942,611	+				-3.3
2,942,611	+				-0.2
2,942,611	+				-0.9
2,942,611	+				+0.4
2,942,611	+				-2.6
2,942,612	-				-0.6
2,942,612	-				-0.3
2,942,612	-				+0.1
2,942,612	-				-0.1
2,942,612	-				-0.2
2,942,612	-				+1.0
2,942,617	-				-1.1
2,942,670	+		DZA65_RS13715	0.30	+1.6
2,942,670	+		DZA65_RS13715	0.30	+0.3
2,942,670	+		DZA65_RS13715	0.30	+0.2
2,942,670	+		DZA65_RS13715	0.30	+0.1
2,942,670	+		DZA65_RS13715	0.30	+0.5
2,942,670	+		DZA65_RS13715	0.30	+0.2
2,942,670	+		DZA65_RS13715	0.30	-0.2
2,942,671	-		DZA65_RS13715	0.30	-0.6
2,942,671	-		DZA65_RS13715	0.30	+1.3
2,942,671	-		DZA65_RS13715	0.30	+0.9
2,942,671	-		DZA65_RS13715	0.30	+0.8
2,942,671	-		DZA65_RS13715	0.30	+0.7
2,942,671	-		DZA65_RS13715	0.30	+1.4
2,942,671	-		DZA65_RS13715	0.30	-1.3
2,942,671	-		DZA65_RS13715	0.30	-0.9
2,942,671	-		DZA65_RS13715	0.30	-0.3
2,942,693	+		DZA65_RS13715	0.40	-2.1
2,942,694	-		DZA65_RS13715	0.40	+0.2
2,942,862	+				+0.2
2,942,863	-				+0.2
2,942,881	+				-0.5
2,942,881	+				+0.8
2,942,881	+				+0.2
2,942,881	+				-0.6
2,942,882	-				+1.2
2,942,882	-				+2.1
2,942,985	+				-0.1
2,943,051	+				-1.5
2,943,051	+				-0.8
2,943,052	-				-0.5
2,943,052	-				-1.8
2,943,052	-				-1.3
2,943,053	+				-0.5
2,943,053	+				-0.0
2,943,053	+				-0.8
2,943,053	+				-0.3
2,943,053	+				-0.8
2,943,053	+				+1.6
2,943,054	-				+0.7
2,943,054	-				-1.8
2,943,054	-				-0.8
2,943,054	-				+1.6
2,943,054	-				+0.8
2,943,054	-				+0.6
2,943,059	+				-0.2
2,943,111	+				-0.4
2,943,111	+				-0.0
2,943,111	+				+0.2
2,943,112	-				+0.7
2,943,116	-				-0.3
2,943,129	+				+0.5
2,943,129	+				-0.3
2,943,133	+				+0.5
2,943,133	+				+0.2
2,943,174	+		DZA65_RS13720	0.16	+1.2
2,943,174	+		DZA65_RS13720	0.16	-1.3
2,943,174	+		DZA65_RS13720	0.16	+1.2
2,943,203	+		DZA65_RS13720	0.27	+0.1
2,943,204	-		DZA65_RS13720	0.27	+0.7
2,943,230	+		DZA65_RS13720	0.38	+0.1
2,943,231	-		DZA65_RS13720	0.38	+0.4
2,943,282	+		DZA65_RS13720	0.58	-0.8
2,943,313	+				-2.3
2,943,313	+		DZA65_RS13720	0.70	-0.4
2,943,313	+		DZA65_RS13720	0.70	+0.3
2,943,314	-		DZA65_RS13720	0.71	+0.4
2,943,314	-		DZA65_RS13720	0.71	+1.0
2,943,314	-		DZA65_RS13720	0.71	-0.4
2,943,314	-		DZA65_RS13720	0.71	+1.6
2,943,314	-		DZA65_RS13720	0.71	-0.9
2,943,359	+				-2.1
2,943,380	-				+0.5
2,943,420	+				+0.9
2,943,535	+				+0.2
2,943,556	-				-0.7
2,943,570	+				-1.2
2,943,615	-				+0.0
2,943,664	+				+1.2
2,943,685	-				-0.2
2,943,804	+				+0.9
2,943,805	-				+0.2
2,943,805	-				+1.2
2,943,839	+		DZA65_RS13725	0.13	+0.4
2,943,839	+		DZA65_RS13725	0.13	+0.1
2,943,839	+		DZA65_RS13725	0.13	+2.2
2,943,839	+		DZA65_RS13725	0.13	-1.0
2,943,839	+		DZA65_RS13725	0.13	-1.0
2,943,839	+		DZA65_RS13725	0.13	-0.7
2,943,839	+		DZA65_RS13725	0.13	+0.2