Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13235

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,830,364	+		DZA65_RS13225	0.57	-0.8
2,830,364	+		DZA65_RS13225	0.57	+0.6
2,830,409	+		DZA65_RS13225	0.63	-0.0
2,830,409	+		DZA65_RS13225	0.63	+0.1
2,830,409	+		DZA65_RS13225	0.63	-0.2
2,830,410	-		DZA65_RS13225	0.63	+0.6
2,830,410	-		DZA65_RS13225	0.63	-0.6
2,830,410	-		DZA65_RS13225	0.63	-0.4
2,830,410	-		DZA65_RS13225	0.63	-0.7
2,830,425	-		DZA65_RS13225	0.65	-0.4
2,830,425	-		DZA65_RS13225	0.65	+0.4
2,830,472	+		DZA65_RS13225	0.71	+0.2
2,830,473	-		DZA65_RS13225	0.71	+0.8
2,830,488	+		DZA65_RS13225	0.73	+1.0
2,830,489	-		DZA65_RS13225	0.73	+0.3
2,830,517	+		DZA65_RS13225	0.77	+0.4
2,830,518	-		DZA65_RS13225	0.77	+1.0
2,830,562	+		DZA65_RS13225	0.82	+0.5
2,830,563	-		DZA65_RS13225	0.83	+0.9
2,830,563	-		DZA65_RS13225	0.83	+0.2
2,830,586	+		DZA65_RS13225	0.86	-0.4
2,830,587	-				+0.2
2,830,602	-		DZA65_RS13225	0.88	+0.4
2,830,605	+		DZA65_RS13225	0.88	-1.4
2,830,605	+		DZA65_RS13225	0.88	-0.3
2,830,605	+		DZA65_RS13225	0.88	-0.2
2,830,605	+		DZA65_RS13225	0.88	-0.1
2,830,605	+		DZA65_RS13225	0.88	-0.1
2,830,605	+		DZA65_RS13225	0.88	+0.5
2,830,606	-		DZA65_RS13225	0.88	-0.0
2,830,606	-		DZA65_RS13225	0.88	-2.8
2,830,606	-		DZA65_RS13225	0.88	-1.2
2,830,671	+				+0.4
2,830,672	-				+0.7
2,830,682	+				+2.0
2,830,698	+				-0.4
2,830,698	+				+0.3
2,830,699	-				-0.8
2,830,699	-				-0.6
2,830,719	+				+0.0
2,830,719	+				+0.4
2,830,720	-				+0.4
2,830,720	-				+0.2
2,830,730	-				-1.2
2,830,732	+				+0.1
2,830,733	-				-2.9
2,830,733	-				+1.6
2,830,733	-				+0.7
2,830,756	-				+0.0
2,830,779	+				+0.6
2,830,814	-				-2.1
2,830,814	-				-0.8
2,830,869	-				+0.4
2,830,887	+				+0.6
2,830,887	+				-1.2
2,830,887	+				+0.2
2,830,888	-				-0.8
2,830,940	-				-0.0
2,831,022	-				+0.1
2,831,050	+				+1.5
2,831,054	+				+0.6
2,831,054	+				-2.1
2,831,074	-				+0.5
2,831,093	-		DZA65_RS13230	0.15	+0.1
2,831,132	-		DZA65_RS13230	0.43	+0.0
2,831,172	-		DZA65_RS13230	0.72	-1.4
2,831,216	-				-2.4
2,831,400	+		DZA65_RS13235	0.34	+0.6
2,831,401	-		DZA65_RS13235	0.34	-3.1
2,831,401	-		DZA65_RS13235	0.34	+0.7
2,831,401	-		DZA65_RS13235	0.34	-0.2
2,831,462	+		DZA65_RS13235	0.46	+0.9
2,831,463	-		DZA65_RS13235	0.46	+1.0
2,831,545	+		DZA65_RS13235	0.62	+1.0
2,831,546	-		DZA65_RS13235	0.62	-0.4
2,831,546	-		DZA65_RS13235	0.62	+0.9
2,831,546	-		DZA65_RS13235	0.62	-0.9
2,831,546	-		DZA65_RS13235	0.62	+1.0
2,831,587	+		DZA65_RS13235	0.70	+0.5
2,831,588	-		DZA65_RS13235	0.70	+1.2
2,831,643	-		DZA65_RS13235	0.81	-2.1
2,831,695	-				-0.6
2,831,722	+				-0.5
2,831,722	+				-1.6
2,831,723	-				-0.5
2,831,723	-				-0.2
2,831,723	-				-1.9
2,831,738	-				+0.4
2,831,741	+				-2.6
2,831,741	+				+0.5
2,831,742	-				-3.1
2,831,742	-				+0.7
2,831,756	+				+0.1
2,831,756	+				-0.0
2,831,800	+				-1.8
2,831,801	-				-1.4
2,831,801	-				-1.3
2,831,804	-				+1.5
2,831,815	-				-0.6
2,831,840	+				-1.1
2,831,840	+				-0.5
2,831,841	-				+0.5
2,831,841	-				-2.3
2,831,841	-				-0.0
2,831,841	-				-0.2
2,831,848	+				+0.5
2,831,848	+				+1.0
2,831,848	+				-0.5
2,831,849	-				-1.8
2,831,862	-				-0.4
2,831,981	+		DZA65_RS13240	0.57	-2.4
2,832,014	-		DZA65_RS13240	0.76	+0.1
2,832,029	+		DZA65_RS13240	0.85	+1.8
2,832,030	-		DZA65_RS13240	0.86	-0.9
2,832,038	+				+0.1
2,832,039	-				+0.1
2,832,041	+				+0.8
2,832,042	-				-0.0
2,832,042	-				-0.3
2,832,047	+				-0.0
2,832,047	+				+0.3
2,832,047	+				-0.0
2,832,047	+				+0.8
2,832,047	+				+0.5
2,832,048	-				-0.5
2,832,048	-				+0.2
2,832,048	-				+0.1
2,832,048	-				+0.4
2,832,048	-				-0.1
2,832,048	-				-1.0
2,832,051	+				+0.2
2,832,068	-				-0.2
2,832,068	-				+0.0
2,832,068	-				+2.8
2,832,078	-				-1.2
2,832,078	-				-1.0
2,832,096	+				+0.0
2,832,118	+				-0.2
2,832,118	+				-1.2
2,832,118	+				+0.8
2,832,152	-				-0.3
2,832,195	-				+0.2
2,832,195	-				-1.4
2,832,236	+				-0.8
2,832,237	-				-1.0
2,832,242	+				-0.8
2,832,242	+				-0.5
2,832,247	+				-1.0
2,832,247	+				-2.4
2,832,247	+				+0.8
2,832,247	+				-0.6
2,832,247	+				+0.3
2,832,247	+				-0.5
2,832,248	-				+0.6
2,832,248	-				+1.8
2,832,277	+				-0.4
2,832,277	+				+1.0
2,832,277	+				+1.0
2,832,277	+				+0.1
2,832,277	+				-0.3
2,832,277	+				-0.3
2,832,277	+				-0.1
2,832,277	+				+0.2
2,832,277	+				-1.4
2,832,277	+				+0.7
2,832,277	+				-0.4
2,832,278	-				-0.0
2,832,278	-				+0.2
2,832,278	-				+0.5
2,832,278	-				+0.3
2,832,278	-				+0.6
2,832,278	-				+0.0
2,832,278	-				+0.7
2,832,278	-				+0.2
2,832,278	-				-0.2
2,832,278	-				-0.8
2,832,396	-		DZA65_RS13245	0.13	+2.0
2,832,623	+		DZA65_RS13245	0.32	-0.8
2,832,647	+		DZA65_RS13245	0.34	+0.8
2,832,647	+		DZA65_RS13245	0.34	+0.3
2,832,648	-		DZA65_RS13245	0.34	-0.2
2,832,648	-		DZA65_RS13245	0.34	-0.6
2,832,694	+		DZA65_RS13245	0.38	+0.3
2,832,704	+		DZA65_RS13245	0.39	+0.4
2,832,705	-		DZA65_RS13245	0.39	-0.2