Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12940

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,774,469	-		DZA65_RS12930	0.70	-0.5
2,774,486	+		DZA65_RS12930	0.72	+0.9
2,774,486	+		DZA65_RS12930	0.72	+1.1
2,774,487	-		DZA65_RS12930	0.72	+0.3
2,774,603	+		DZA65_RS12930	0.80	+0.4
2,774,604	-		DZA65_RS12930	0.80	-0.7
2,774,627	+		DZA65_RS12930	0.82	+1.5
2,774,628	-		DZA65_RS12930	0.82	-0.3
2,774,763	+				-0.7
2,774,763	+				+0.7
2,774,763	+				+0.3
2,774,776	-				+0.1
2,774,914	+				-1.8
2,774,915	-				+0.5
2,774,929	+				+0.2
2,774,956	+				+0.4
2,774,956	+				-0.5
2,774,957	-				+1.8
2,774,993	-				-0.1
2,774,993	-				+3.4
2,775,073	+				-0.6
2,775,073	+				-0.0
2,775,074	-				-0.0
2,775,075	+				-1.4
2,775,075	+				-1.1
2,775,075	+				+0.5
2,775,075	+				-0.8
2,775,075	+				-0.8
2,775,075	+				-0.8
2,775,076	-				+0.4
2,775,076	-				+0.5
2,775,076	-				+0.6
2,775,076	-				-0.6
2,775,076	-				+0.5
2,775,076	-				-0.2
2,775,076	-				+1.0
2,775,103	+				+0.2
2,775,103	+				-0.3
2,775,103	+				-0.0
2,775,103	+				+0.0
2,775,103	+				-0.4
2,775,103	+				-0.0
2,775,103	+				+0.0
2,775,103	+				+0.2
2,775,103	+				-0.1
2,775,103	+				-0.3
2,775,103	+				+1.0
2,775,104	-				+0.2
2,775,104	-				+1.0
2,775,104	-				+0.8
2,775,119	+		DZA65_RS12935	0.13	+0.2
2,775,119	+		DZA65_RS12935	0.13	-1.2
2,775,119	+		DZA65_RS12935	0.13	+0.1
2,775,120	-		DZA65_RS12935	0.13	+0.2
2,775,120	-		DZA65_RS12935	0.13	+0.6
2,775,120	-		DZA65_RS12935	0.13	-0.1
2,775,120	-		DZA65_RS12935	0.13	+0.1
2,775,120	-		DZA65_RS12935	0.13	+0.2
2,775,120	-		DZA65_RS12935	0.13	+0.5
2,775,120	-		DZA65_RS12935	0.13	-0.7
2,775,120	-		DZA65_RS12935	0.13	+0.2
2,775,121	+		DZA65_RS12935	0.14	+0.2
2,775,121	+		DZA65_RS12935	0.14	+1.1
2,775,121	+		DZA65_RS12935	0.14	-0.2
2,775,121	+		DZA65_RS12935	0.14	+0.4
2,775,121	+		DZA65_RS12935	0.14	-0.4
2,775,122	-		DZA65_RS12935	0.14	-0.0
2,775,122	-				-0.8
2,775,122	-		DZA65_RS12935	0.14	+0.6
2,775,122	-		DZA65_RS12935	0.14	-0.0
2,775,122	-		DZA65_RS12935	0.14	-0.2
2,775,254	+		DZA65_RS12935	0.51	-1.5
2,775,254	+		DZA65_RS12935	0.51	-0.9
2,775,255	-		DZA65_RS12935	0.51	-0.2
2,775,255	-		DZA65_RS12935	0.51	+0.4
2,775,255	-		DZA65_RS12935	0.51	-1.6
2,775,255	-		DZA65_RS12935	0.51	+0.2
2,775,255	-		DZA65_RS12935	0.51	-0.5
2,775,265	+		DZA65_RS12935	0.54	-0.4
2,775,265	+		DZA65_RS12935	0.54	+0.4
2,775,265	+		DZA65_RS12935	0.54	+0.4
2,775,265	+		DZA65_RS12935	0.54	-0.1
2,775,278	+		DZA65_RS12935	0.57	+0.5
2,775,278	+		DZA65_RS12935	0.57	+0.3
2,775,278	+		DZA65_RS12935	0.57	+0.6
2,775,279	-		DZA65_RS12935	0.57	+0.5
2,775,321	-		DZA65_RS12935	0.69	+0.5
2,775,321	-		DZA65_RS12935	0.69	-1.1
2,775,350	-		DZA65_RS12935	0.77	-0.9
2,775,403	+				+0.0
2,775,404	-				+0.4
2,775,499	+		DZA65_RS12940	0.29	-0.7
2,775,499	+		DZA65_RS12940	0.29	+0.2
2,775,499	+		DZA65_RS12940	0.29	+0.4
2,775,499	+		DZA65_RS12940	0.29	-0.9
2,775,499	+		DZA65_RS12940	0.29	+1.6
2,775,499	+		DZA65_RS12940	0.29	+0.6
2,775,499	+		DZA65_RS12940	0.29	-1.9
2,775,500	-		DZA65_RS12940	0.30	-1.0
2,775,500	-		DZA65_RS12940	0.30	-1.3
2,775,562	+		DZA65_RS12940	0.57	-2.1
2,775,562	+		DZA65_RS12940	0.57	+0.1
2,775,583	-		DZA65_RS12940	0.66	-1.1
2,775,672	+				+0.2
2,775,677	-				+0.5
2,775,677	-				-0.5
2,775,679	+				+0.1
2,775,680	-				+0.4
2,775,740	+				+1.6
2,775,740	+				+0.8
2,775,741	-				+0.5
2,775,741	-				-2.1
2,775,913	+		DZA65_RS12945	0.28	+1.3
2,775,914	-		DZA65_RS12945	0.28	-2.4
2,776,009	+		DZA65_RS12945	0.43	+0.6
2,776,010	-		DZA65_RS12945	0.43	-0.6
2,776,010	-		DZA65_RS12945	0.43	+1.2
2,776,255	+		DZA65_RS12945	0.80	-0.6
2,776,255	+		DZA65_RS12945	0.80	+0.0
2,776,256	-		DZA65_RS12945	0.80	+0.4
2,776,256	-		DZA65_RS12945	0.80	+1.6
2,776,256	-		DZA65_RS12945	0.80	+0.2
2,776,276	+		DZA65_RS12945	0.83	-0.4
2,776,277	-		DZA65_RS12945	0.83	-0.1
2,776,277	-		DZA65_RS12945	0.83	-2.1
2,776,277	-		DZA65_RS12945	0.83	-1.4
2,776,390	+				-3.1
2,776,390	+				-0.8
2,776,390	+				-0.1
2,776,390	+				+0.8
2,776,391	-				-0.3
2,776,396	-				-0.4
2,776,396	-				+2.1
2,776,396	-				-1.4
2,776,466	+				-0.1
2,776,467	-				-1.4
2,776,467	-				+1.2
2,776,470	+				-2.1
2,776,470	+				-0.8
2,776,470	+				+1.8
2,776,471	-				+1.0
2,776,471	-				+0.1
2,776,472	+				-1.1
2,776,473	-				-0.8
2,776,473	-				+0.2
2,776,510	+				+0.8
2,776,538	-				-1.1
2,776,543	+				+0.2
2,776,544	-				-0.8
2,776,544	-				+0.1