Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12725

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,721,747	-		DZA65_RS12715	0.88	+0.4
2,721,772	+		DZA65_RS12715	0.89	-0.6
2,721,772	+		DZA65_RS12715	0.89	+0.9
2,721,834	-				+0.2
2,721,867	-				-0.0
2,721,988	+				-2.0
2,721,988	+				-0.3
2,721,989	-				-0.2
2,721,989	-				-0.0
2,721,989	-				+0.5
2,721,992	-				-0.8
2,722,026	-				+0.5
2,722,087	+				-1.0
2,722,087	+				+0.1
2,722,087	+				+0.1
2,722,087	+				+0.6
2,722,087	+				+0.4
2,722,087	+				+0.2
2,722,087	+				+0.5
2,722,087	+				-0.7
2,722,087	+				-0.4
2,722,087	+				+0.5
2,722,087	+				+0.8
2,722,087	+				+0.3
2,722,087	+				-0.9
2,722,087	+				+1.2
2,722,087	+				-0.3
2,722,087	+				+0.3
2,722,087	+				-0.1
2,722,087	+				-0.4
2,722,087	+				+0.3
2,722,087	+				-1.9
2,722,088	-				+0.0
2,722,088	-				+0.2
2,722,088	-				+1.8
2,722,088	-				-0.1
2,722,088	-				-1.2
2,722,088	-				+0.8
2,722,088	-				-0.1
2,722,088	-				-0.7
2,722,088	-				+0.2
2,722,088	-				-0.0
2,722,088	-				-0.2
2,722,088	-				-2.4
2,722,088	-				+0.9
2,722,088	-				-0.1
2,722,088	-				+0.0
2,722,088	-				-1.1
2,722,088	-				-0.4
2,722,088	-				-0.8
2,722,121	-		DZA65_RS12720	0.12	+0.3
2,722,121	-		DZA65_RS12720	0.12	+0.2
2,722,121	-				+1.2
2,722,165	+		DZA65_RS12720	0.19	+1.4
2,722,165	+		DZA65_RS12720	0.19	-0.1
2,722,166	-		DZA65_RS12720	0.19	-0.2
2,722,166	-		DZA65_RS12720	0.19	+0.6
2,722,166	-		DZA65_RS12720	0.19	-0.2
2,722,283	+		DZA65_RS12720	0.36	-0.4
2,722,296	+		DZA65_RS12720	0.38	-0.3
2,722,296	+		DZA65_RS12720	0.38	+0.2
2,722,296	+		DZA65_RS12720	0.38	+0.3
2,722,296	+		DZA65_RS12720	0.38	+0.2
2,722,296	+		DZA65_RS12720	0.38	-2.6
2,722,296	+		DZA65_RS12720	0.38	-0.6
2,722,296	+		DZA65_RS12720	0.38	+0.3
2,722,297	-		DZA65_RS12720	0.38	+0.5
2,722,297	-		DZA65_RS12720	0.38	+1.3
2,722,297	-		DZA65_RS12720	0.38	-0.2
2,722,297	-		DZA65_RS12720	0.38	-0.7
2,722,300	+		DZA65_RS12720	0.38	-0.3
2,722,434	+		DZA65_RS12720	0.58	-0.7
2,722,434	+		DZA65_RS12720	0.58	+0.6
2,722,434	+		DZA65_RS12720	0.58	-0.2
2,722,435	-		DZA65_RS12720	0.58	-1.1
2,722,457	+		DZA65_RS12720	0.61	+1.5
2,722,457	+		DZA65_RS12720	0.61	+1.1
2,722,458	-		DZA65_RS12720	0.62	-1.8
2,722,458	-		DZA65_RS12720	0.62	-1.5
2,722,458	-		DZA65_RS12720	0.62	-1.0
2,722,497	+		DZA65_RS12720	0.67	-0.2
2,722,497	+		DZA65_RS12720	0.67	+0.5
2,722,544	-		DZA65_RS12720	0.74	+0.5
2,722,563	-		DZA65_RS12720	0.77	-0.2
2,722,565	+		DZA65_RS12720	0.77	+0.2
2,722,566	-		DZA65_RS12720	0.77	+0.5
2,722,566	-		DZA65_RS12720	0.77	+0.4
2,722,773	-				+0.3
2,722,811	-				-1.8
2,722,922	+		DZA65_RS12725	0.25	-0.8
2,722,923	-		DZA65_RS12725	0.25	+0.3
2,722,929	+		DZA65_RS12725	0.25	-1.4
2,722,929	+		DZA65_RS12725	0.25	-1.8
2,722,930	-		DZA65_RS12725	0.26	-0.9
2,722,930	-		DZA65_RS12725	0.26	-1.1
2,722,930	-		DZA65_RS12725	0.26	-0.6
2,723,147	+		DZA65_RS12725	0.51	+0.2
2,723,148	-		DZA65_RS12725	0.51	+0.5
2,723,148	-		DZA65_RS12725	0.51	-1.4
2,723,498	+				+0.5
2,723,562	-				-0.1
2,723,604	+				+0.9
2,723,605	-				-1.0
2,723,831	+		DZA65_RS12730	0.33	-0.3
2,723,831	+		DZA65_RS12730	0.33	+0.0
2,723,831	+		DZA65_RS12730	0.33	-0.5
2,723,832	-		DZA65_RS12730	0.33	+0.2
2,723,832	-		DZA65_RS12730	0.33	+0.9
2,723,832	-		DZA65_RS12730	0.33	+0.2
2,723,832	-		DZA65_RS12730	0.33	+1.5
2,723,832	-		DZA65_RS12730	0.33	-0.6
2,723,832	-		DZA65_RS12730	0.33	+0.6
2,723,854	-		DZA65_RS12730	0.36	-1.8
2,723,901	+		DZA65_RS12730	0.41	-0.7
2,723,987	-		DZA65_RS12730	0.51	+0.2
2,724,080	+		DZA65_RS12730	0.62	-0.8
2,724,097	+		DZA65_RS12730	0.64	-1.6
2,724,098	-		DZA65_RS12730	0.64	-0.3
2,724,117	+		DZA65_RS12730	0.66	-0.8
2,724,117	+		DZA65_RS12730	0.66	-0.2
2,724,118	-		DZA65_RS12730	0.66	-1.1
2,724,118	-		DZA65_RS12730	0.66	-1.8
2,724,118	-		DZA65_RS12730	0.66	-0.7
2,724,118	-		DZA65_RS12730	0.66	-0.9
2,724,167	+		DZA65_RS12730	0.72	+1.8
2,724,168	-		DZA65_RS12730	0.72	+0.1
2,724,168	-		DZA65_RS12730	0.72	+0.2
2,724,168	-		DZA65_RS12730	0.72	-0.8
2,724,168	-		DZA65_RS12730	0.72	+0.6
2,724,263	+		DZA65_RS12730	0.83	+0.4
2,724,263	+		DZA65_RS12730	0.83	-1.2
2,724,264	-		DZA65_RS12730	0.83	-1.2
2,724,264	-		DZA65_RS12730	0.83	+0.1
2,724,394	-				+1.4
2,724,406	+				-0.5
2,724,406	+				-2.1
2,724,407	-				+0.2
2,724,407	-				-0.4
2,724,473	+				+0.2
2,724,474	-				+1.2
2,724,507	+				-0.5
2,724,543	+		DZA65_RS12735	0.12	-0.0
2,724,543	+		DZA65_RS12735	0.12	+0.9
2,724,544	-		DZA65_RS12735	0.12	+0.5
2,724,544	-		DZA65_RS12735	0.12	+0.6
2,724,544	-		DZA65_RS12735	0.12	-0.1
2,724,547	+		DZA65_RS12735	0.13	+0.6
2,724,547	+		DZA65_RS12735	0.13	-1.5