Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12335

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,632,837	+		DZA65_RS12325	0.84	-0.4
2,632,846	+		DZA65_RS12325	0.85	-0.5
2,632,981	+				-0.8
2,633,001	+				-0.5
2,633,001	+				+1.8
2,633,001	+				-0.1
2,633,001	+				+0.5
2,633,001	+				+0.4
2,633,001	+				-0.4
2,633,001	+				-0.0
2,633,001	+				-0.7
2,633,001	+				-1.0
2,633,001	+				+0.2
2,633,002	-				+0.6
2,633,002	-				-1.1
2,633,002	-				+0.2
2,633,002	-				+0.0
2,633,002	-				+0.2
2,633,002	-				-0.9
2,633,178	+		DZA65_RS12330	0.23	-0.4
2,633,178	+		DZA65_RS12330	0.23	-0.0
2,633,178	+		DZA65_RS12330	0.23	-1.0
2,633,178	+		DZA65_RS12330	0.23	-1.4
2,633,179	-		DZA65_RS12330	0.23	+0.2
2,633,179	-		DZA65_RS12330	0.23	+0.2
2,633,179	-		DZA65_RS12330	0.23	-0.1
2,633,179	-		DZA65_RS12330	0.23	+0.1
2,633,179	-		DZA65_RS12330	0.23	+0.0
2,633,179	-		DZA65_RS12330	0.23	-0.2
2,633,237	+		DZA65_RS12330	0.31	+1.3
2,633,237	+		DZA65_RS12330	0.31	+0.4
2,633,238	-		DZA65_RS12330	0.31	-1.7
2,633,238	-		DZA65_RS12330	0.31	+0.0
2,633,238	-		DZA65_RS12330	0.31	+0.5
2,633,267	+		DZA65_RS12330	0.36	-0.4
2,633,268	-		DZA65_RS12330	0.36	-0.2
2,633,268	-		DZA65_RS12330	0.36	-0.1
2,633,395	-		DZA65_RS12330	0.55	-0.9
2,633,555	-		DZA65_RS12330	0.78	-2.1
2,633,653	-				-0.6
2,633,696	+				-0.6
2,633,696	+				-0.4
2,633,696	+				-0.0
2,633,697	-				-2.1
2,633,697	-				+0.2
2,633,761	+				+0.6
2,633,922	+		DZA65_RS12335	0.12	-0.5
2,633,923	-		DZA65_RS12335	0.12	-0.0
2,633,933	+		DZA65_RS12335	0.12	+1.2
2,634,132	+		DZA65_RS12335	0.28	+0.0
2,634,132	+		DZA65_RS12335	0.28	-0.7
2,634,132	+		DZA65_RS12335	0.28	-0.3
2,634,132	+		DZA65_RS12335	0.28	-0.5
2,634,132	+		DZA65_RS12335	0.28	-0.6
2,634,132	+		DZA65_RS12335	0.28	-1.2
2,634,132	+		DZA65_RS12335	0.28	-0.6
2,634,133	-		DZA65_RS12335	0.28	-0.2
2,634,133	-		DZA65_RS12335	0.28	-0.2
2,634,133	-		DZA65_RS12335	0.28	-0.4
2,634,133	-		DZA65_RS12335	0.28	-0.7
2,634,133	-		DZA65_RS12335	0.28	-0.0
2,634,133	-		DZA65_RS12335	0.28	-0.1
2,634,133	-		DZA65_RS12335	0.28	-0.2
2,634,133	-		DZA65_RS12335	0.28	-1.1
2,634,143	+		DZA65_RS12335	0.29	+0.2
2,634,143	+		DZA65_RS12335	0.29	+0.4
2,634,143	+		DZA65_RS12335	0.29	+0.6
2,634,143	+		DZA65_RS12335	0.29	-1.8
2,634,144	-		DZA65_RS12335	0.29	-0.8
2,634,144	-		DZA65_RS12335	0.29	+0.3
2,634,144	-		DZA65_RS12335	0.29	+0.3
2,634,144	-		DZA65_RS12335	0.29	+1.2
2,634,144	-		DZA65_RS12335	0.29	-1.0
2,634,144	-		DZA65_RS12335	0.29	-0.6
2,634,692	+		DZA65_RS12335	0.73	+0.4
2,634,980	+				+1.0
2,634,981	-				+0.4
2,634,981	-				-1.3
2,634,981	-				+0.7
2,635,018	+				-0.1
2,635,019	-				-1.0
2,635,019	-				+0.7
2,635,019	-				-0.0
2,635,037	+				+0.7
2,635,037	+				-1.1
2,635,038	-				-2.1
2,635,065	+				-0.7
2,635,066	-				+0.5
2,635,120	+				-2.6
2,635,121	-				+0.6
2,635,131	-				-0.4
2,635,131	-				-0.2
2,635,210	+		DZA65_RS12340	0.15	+0.1
2,635,210	+		DZA65_RS12340	0.15	-0.0
2,635,211	-		DZA65_RS12340	0.15	+0.4
2,635,211	-		DZA65_RS12340	0.15	+1.0
2,635,396	-		DZA65_RS12340	0.31	+0.2
2,635,417	-		DZA65_RS12340	0.32	-0.8
2,635,417	-		DZA65_RS12340	0.32	-0.9
2,635,417	-		DZA65_RS12340	0.32	-0.6
2,635,438	+		DZA65_RS12340	0.34	+0.8
2,635,438	+		DZA65_RS12340	0.34	-0.2
2,635,439	-		DZA65_RS12340	0.34	-0.1
2,635,439	-		DZA65_RS12340	0.34	+0.2
2,635,581	+		DZA65_RS12340	0.46	+0.5
2,635,582	-		DZA65_RS12340	0.46	-0.4
2,635,673	+		DZA65_RS12340	0.54	-0.4
2,635,673	+		DZA65_RS12340	0.54	-0.5
2,635,674	-		DZA65_RS12340	0.54	-1.2
2,635,719	+		DZA65_RS12340	0.57	-0.2
2,635,720	-		DZA65_RS12340	0.57	-0.7
2,635,740	-		DZA65_RS12340	0.59	-2.0