Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11725

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,500,971	-		DZA65_RS11720	0.37	-1.4
2,501,105	+		DZA65_RS11720	0.55	+0.3
2,501,106	-		DZA65_RS11720	0.55	-0.2
2,501,112	-		DZA65_RS11720	0.56	+0.6
2,501,157	+		DZA65_RS11720	0.62	-0.7
2,501,157	+		DZA65_RS11720	0.62	-0.2
2,501,157	+		DZA65_RS11720	0.62	+0.2
2,501,157	+		DZA65_RS11720	0.62	-0.6
2,501,157	+		DZA65_RS11720	0.62	+0.4
2,501,157	+		DZA65_RS11720	0.62	+0.9
2,501,157	+		DZA65_RS11720	0.62	-1.2
2,501,158	-		DZA65_RS11720	0.62	+1.6
2,501,158	-		DZA65_RS11720	0.62	-1.5
2,501,158	-		DZA65_RS11720	0.62	-0.5
2,501,253	+		DZA65_RS11720	0.74	+0.2
2,501,254	-		DZA65_RS11720	0.75	-0.4
2,501,301	-		DZA65_RS11720	0.81	+0.4
2,501,301	-		DZA65_RS11720	0.81	-1.4
2,501,321	+		DZA65_RS11720	0.83	+0.8
2,501,397	+				+0.6
2,501,398	-				+1.0
2,501,399	+				-0.0
2,501,399	+				-0.6
2,501,399	+				+0.6
2,501,400	-				+1.2
2,501,400	-				+1.2
2,501,400	-				-1.0
2,501,400	-				-0.5
2,501,400	-				-0.8
2,501,401	+				-2.7
2,501,402	-				-0.6
2,501,402	-				-0.6
2,501,402	-				+0.6
2,501,409	+				+0.3
2,501,410	-				-1.3
2,501,412	-				+0.0
2,501,641	-				-0.3
2,501,642	+				+0.5
2,501,693	+				-0.8
2,501,693	+				+0.2
2,501,693	+				+1.4
2,501,693	+				+0.2
2,501,694	-				+0.8
2,501,694	-				-0.5
2,501,696	-				-0.3
2,501,696	-				+0.6
2,501,696	-				-0.6
2,501,696	-				+1.2
2,501,703	+				+1.0
2,501,703	+				-0.4
2,501,704	-				-1.2
2,501,774	+				-0.4
2,501,783	+				-0.0
2,501,783	+				-0.1
2,501,803	-				+0.3
2,502,012	+		DZA65_RS11725	0.19	-0.4
2,502,075	-		DZA65_RS11725	0.22	-0.4
2,502,075	-		DZA65_RS11725	0.22	+0.4
2,502,077	+		DZA65_RS11725	0.23	+0.4
2,502,077	+		DZA65_RS11725	0.23	+0.2
2,502,134	-		DZA65_RS11725	0.26	-0.4
2,502,223	+		DZA65_RS11725	0.31	-1.4
2,502,223	+		DZA65_RS11725	0.31	-0.3
2,502,223	+		DZA65_RS11725	0.31	-0.3
2,502,224	-		DZA65_RS11725	0.32	-0.3
2,502,224	-		DZA65_RS11725	0.32	-0.1
2,502,224	-		DZA65_RS11725	0.32	+0.6
2,502,224	-		DZA65_RS11725	0.32	-0.1
2,502,264	+		DZA65_RS11725	0.34	-0.0
2,502,289	+		DZA65_RS11725	0.36	-0.1
2,502,289	+		DZA65_RS11725	0.36	-0.2
2,502,289	+		DZA65_RS11725	0.36	+0.8
2,502,290	-		DZA65_RS11725	0.36	+2.1
2,502,290	-		DZA65_RS11725	0.36	-0.8
2,502,390	+		DZA65_RS11725	0.42	+0.4
2,502,390	+		DZA65_RS11725	0.42	+0.6
2,502,390	+		DZA65_RS11725	0.42	+0.2
2,502,391	-		DZA65_RS11725	0.42	+0.6
2,502,391	-		DZA65_RS11725	0.42	-0.4
2,502,405	+		DZA65_RS11725	0.43	-0.8
2,502,405	+		DZA65_RS11725	0.43	+2.2
2,502,405	+		DZA65_RS11725	0.43	+0.6
2,502,406	-		DZA65_RS11725	0.43	+0.2
2,502,406	-		DZA65_RS11725	0.43	-1.4
2,502,428	-		DZA65_RS11725	0.44	-1.8
2,502,465	+		DZA65_RS11725	0.46	-1.6
2,502,466	-		DZA65_RS11725	0.46	-1.4
2,502,479	+		DZA65_RS11725	0.47	-1.8
2,502,504	+		DZA65_RS11725	0.49	-0.3
2,502,504	+		DZA65_RS11725	0.49	-0.2
2,502,513	-		DZA65_RS11725	0.49	+0.5
2,502,523	+		DZA65_RS11725	0.50	-1.2
2,502,552	-		DZA65_RS11725	0.52	+0.2
2,502,750	+		DZA65_RS11725	0.64	+1.1
2,502,765	+		DZA65_RS11725	0.65	-0.4
2,502,765	+		DZA65_RS11725	0.65	+0.2
2,502,765	+		DZA65_RS11725	0.65	+1.4
2,502,766	-		DZA65_RS11725	0.65	+0.8
2,502,766	-		DZA65_RS11725	0.65	+0.5
2,502,825	+		DZA65_RS11725	0.68	+0.6
2,502,846	+		DZA65_RS11725	0.70	+1.6
2,502,847	-		DZA65_RS11725	0.70	-0.3
2,502,849	+		DZA65_RS11725	0.70	-0.1
2,502,869	-		DZA65_RS11725	0.71	+0.2
2,502,898	-		DZA65_RS11725	0.73	-0.4
2,502,948	+		DZA65_RS11725	0.76	+0.2
2,502,949	-		DZA65_RS11725	0.76	+0.2
2,502,949	-		DZA65_RS11725	0.76	+0.2
2,502,949	-		DZA65_RS11725	0.76	-0.1
2,502,949	-		DZA65_RS11725	0.76	+0.2
2,502,949	-		DZA65_RS11725	0.76	+1.2
2,502,949	-		DZA65_RS11725	0.76	+0.2
2,502,949	-		DZA65_RS11725	0.76	-1.1
2,502,950	+		DZA65_RS11725	0.76	+1.8
2,502,950	+		DZA65_RS11725	0.76	+0.5
2,502,950	+		DZA65_RS11725	0.76	-1.8
2,502,950	+		DZA65_RS11725	0.76	-0.4
2,502,951	-		DZA65_RS11725	0.76	-0.4
2,502,958	+		DZA65_RS11725	0.77	-0.4
2,502,958	+		DZA65_RS11725	0.77	-0.2
2,502,958	+		DZA65_RS11725	0.77	+0.1
2,502,959	-		DZA65_RS11725	0.77	+1.4
2,503,075	-		DZA65_RS11725	0.84	-0.3
2,503,075	-		DZA65_RS11725	0.84	+2.0
2,503,152	+		DZA65_RS11725	0.88	+1.2
2,503,153	-		DZA65_RS11725	0.88	+1.2
2,503,153	-		DZA65_RS11725	0.88	+0.2
2,503,156	+		DZA65_RS11725	0.89	-0.5
2,503,157	-		DZA65_RS11725	0.89	-0.2
2,503,215	-				+0.7
2,503,215	-				+0.7
2,503,255	-				+0.6
2,503,255	-				-1.8
2,503,255	-				-0.7
2,503,255	-				-0.7
2,503,295	+				-1.5
2,503,368	-				-0.7
2,503,373	-				-0.3
2,503,373	-				+1.9
2,503,414	+				+0.3
2,503,414	+				-0.1
2,503,415	-				+0.2
2,503,416	+				+2.2
2,503,427	-				-1.4
2,503,428	+				-2.2
2,503,428	+				+1.2
2,503,429	-				-1.8
2,503,430	+				-0.1
2,503,430	+				-0.1
2,503,430	+				+0.2
2,503,430	+				+0.4
2,503,431	-				-0.8
2,503,434	-				+1.1
2,503,449	+				+0.6
2,503,465	-				+0.6
2,503,478	+		DZA65_RS11730	0.11	+0.7
2,503,496	-		DZA65_RS11730	0.13	-0.1
2,503,503	-		DZA65_RS11730	0.13	+1.0
2,503,503	-		DZA65_RS11730	0.13	+0.6
2,503,551	+		DZA65_RS11730	0.19	-0.4
2,503,552	-		DZA65_RS11730	0.19	-0.4
2,503,597	+		DZA65_RS11730	0.24	+0.2
2,503,597	+		DZA65_RS11730	0.24	-0.4
2,503,597	+		DZA65_RS11730	0.24	+0.4
2,503,597	+		DZA65_RS11730	0.24	+1.2
2,503,597	+		DZA65_RS11730	0.24	+0.2
2,503,598	-		DZA65_RS11730	0.24	+0.3
2,503,598	-		DZA65_RS11730	0.24	-0.2
2,503,598	-		DZA65_RS11730	0.24	+0.7
2,503,598	-		DZA65_RS11730	0.24	-0.2
2,503,607	+		DZA65_RS11730	0.25	-1.2
2,503,699	+		DZA65_RS11730	0.35	+1.0
2,503,699	+		DZA65_RS11730	0.35	+0.5
2,503,699	+		DZA65_RS11730	0.35	-1.5
2,503,699	+		DZA65_RS11730	0.35	-1.1
2,503,699	+		DZA65_RS11730	0.35	+0.2
2,503,699	+		DZA65_RS11730	0.35	-0.5
2,503,700	-		DZA65_RS11730	0.35	-2.3
2,503,700	-		DZA65_RS11730	0.35	-1.8
2,503,700	-		DZA65_RS11730	0.35	+0.2
2,503,700	-		DZA65_RS11730	0.35	+1.2
2,503,700	-				+1.7
2,503,700	-		DZA65_RS11730	0.35	+0.5
2,503,723	-		DZA65_RS11730	0.38	+1.2
2,503,727	+		DZA65_RS11730	0.38	+0.4
2,503,727	+		DZA65_RS11730	0.38	-0.3
2,503,727	+		DZA65_RS11730	0.38	-0.8
2,503,727	+				-0.8
2,503,728	-		DZA65_RS11730	0.39	+1.2
2,503,728	-		DZA65_RS11730	0.39	-2.7
2,503,728	-		DZA65_RS11730	0.39	-1.8
2,503,731	+		DZA65_RS11730	0.39	+1.1
2,503,739	+		DZA65_RS11730	0.40	+0.6
2,503,779	+		DZA65_RS11730	0.44	-1.7
2,503,779	+		DZA65_RS11730	0.44	-2.2
2,503,785	+		DZA65_RS11730	0.45	-0.5
2,503,890	+		DZA65_RS11730	0.57	+0.0
2,503,931	-		DZA65_RS11730	0.61	+0.4
2,504,034	+		DZA65_RS11730	0.73	+0.2
2,504,035	-		DZA65_RS11730	0.73	-1.4
2,504,035	-		DZA65_RS11730	0.73	+0.4
2,504,065	+		DZA65_RS11730	0.76	-1.7
2,504,066	-		DZA65_RS11730	0.77	+0.0
2,504,095	+				+1.4
2,504,096	-		DZA65_RS11730	0.80	-0.6
2,504,101	+		DZA65_RS11730	0.80	-0.8
2,504,101	+		DZA65_RS11730	0.80	+0.2
2,504,101	+		DZA65_RS11730	0.80	+1.0
2,504,102	-		DZA65_RS11730	0.81	-0.0
2,504,102	-		DZA65_RS11730	0.81	+0.3
2,504,102	-		DZA65_RS11730	0.81	+0.5
2,504,102	-		DZA65_RS11730	0.81	-0.4
2,504,102	-		DZA65_RS11730	0.81	+0.3
2,504,102	-		DZA65_RS11730	0.81	-1.0
2,504,116	+		DZA65_RS11730	0.82	-0.1
2,504,116	+		DZA65_RS11730	0.82	-0.3
2,504,116	+		DZA65_RS11730	0.82	-0.2
2,504,116	+		DZA65_RS11730	0.82	+1.0
2,504,116	+		DZA65_RS11730	0.82	+0.2
2,504,116	+		DZA65_RS11730	0.82	+1.7
2,504,116	+		DZA65_RS11730	0.82	-0.8
2,504,116	+		DZA65_RS11730	0.82	-0.8
2,504,116	-		DZA65_RS11730	0.82	+0.5
2,504,117	-		DZA65_RS11730	0.82	+0.2
2,504,117	-		DZA65_RS11730	0.82	+0.6
2,504,117	-		DZA65_RS11730	0.82	+0.3
2,504,117	-		DZA65_RS11730	0.82	+0.4
2,504,117	-		DZA65_RS11730	0.82	-1.0
2,504,117	-		DZA65_RS11730	0.82	-0.4
2,504,117	-		DZA65_RS11730	0.82	-0.4
2,504,118	+		DZA65_RS11730	0.82	-1.2
2,504,118	+		DZA65_RS11730	0.82	+0.7
2,504,118	+		DZA65_RS11730	0.82	-1.3
2,504,118	+		DZA65_RS11730	0.82	+0.4
2,504,118	+		DZA65_RS11730	0.82	+1.0
2,504,118	+		DZA65_RS11730	0.82	-0.8
2,504,118	+		DZA65_RS11730	0.82	+0.0
2,504,118	+		DZA65_RS11730	0.82	-0.1
2,504,119	-		DZA65_RS11730	0.82	-1.4
2,504,119	-		DZA65_RS11730	0.82	+0.2
2,504,119	-		DZA65_RS11730	0.82	-1.3
2,504,119	-		DZA65_RS11730	0.82	+0.4
2,504,122	+		DZA65_RS11730	0.83	-0.4
2,504,122	+				-1.4
2,504,122	+		DZA65_RS11730	0.83	-0.2
2,504,122	+		DZA65_RS11730	0.83	-0.0
2,504,122	+		DZA65_RS11730	0.83	-0.5
2,504,122	+		DZA65_RS11730	0.83	-0.3
2,504,123	-		DZA65_RS11730	0.83	-1.2
2,504,123	-		DZA65_RS11730	0.83	+1.3
2,504,123	-		DZA65_RS11730	0.83	-1.3
2,504,140	+		DZA65_RS11730	0.85	-1.2
2,504,140	+		DZA65_RS11730	0.85	-1.7
2,504,208	+				-0.4
2,504,208	+				-0.1
2,504,227	-				+1.5
2,504,227	-				-0.1
2,504,230	+				+1.3
2,504,231	-				-0.2
2,504,242	+				-1.1