Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11320

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,405,614	+		DZA65_RS11315	0.48	+0.1
2,405,614	+		DZA65_RS11315	0.48	-0.9
2,405,615	-		DZA65_RS11315	0.48	+0.5
2,405,615	-		DZA65_RS11315	0.48	-2.4
2,405,615	-		DZA65_RS11315	0.48	+0.3
2,405,615	-		DZA65_RS11315	0.48	-0.3
2,405,636	+		DZA65_RS11315	0.50	+0.7
2,405,636	+		DZA65_RS11315	0.50	+1.6
2,405,636	+		DZA65_RS11315	0.50	-0.1
2,405,636	+		DZA65_RS11315	0.50	-0.9
2,405,636	+		DZA65_RS11315	0.50	-0.3
2,405,636	+		DZA65_RS11315	0.50	+0.1
2,405,637	-		DZA65_RS11315	0.50	-1.2
2,405,637	-		DZA65_RS11315	0.50	+0.9
2,405,637	-		DZA65_RS11315	0.50	+0.4
2,405,637	-		DZA65_RS11315	0.50	+0.7
2,405,865	+		DZA65_RS11315	0.71	-0.6
2,405,929	+		DZA65_RS11315	0.77	-0.7
2,405,929	+		DZA65_RS11315	0.77	+0.6
2,405,929	+		DZA65_RS11315	0.77	+0.5
2,405,930	-		DZA65_RS11315	0.77	-0.9
2,405,930	-		DZA65_RS11315	0.77	-0.2
2,405,930	-		DZA65_RS11315	0.77	+0.3
2,405,951	+		DZA65_RS11315	0.79	-1.2
2,405,951	+		DZA65_RS11315	0.79	+0.5
2,405,951	+		DZA65_RS11315	0.79	+1.6
2,405,952	-		DZA65_RS11315	0.79	-1.6
2,406,023	+		DZA65_RS11315	0.86	-0.9
2,406,036	-		DZA65_RS11315	0.87	-0.4
2,406,142	+				-1.0
2,406,143	-				-0.6
2,406,174	-				-0.0
2,406,174	-				-0.6
2,406,180	+				+0.6
2,406,180	+				+0.6
2,406,180	+				-0.9
2,406,180	+				+0.5
2,406,180	+				+1.3
2,406,180	+				-0.3
2,406,180	+				-0.2
2,406,180	+				+0.5
2,406,180	+				+1.6
2,406,180	+				-0.1
2,406,180	+				-0.2
2,406,181	-				-1.9
2,406,181	-				-0.5
2,406,181	-				+0.3
2,406,181	-				-1.4
2,406,181	-				-0.2
2,406,236	-				+0.1
2,406,261	+				-1.1
2,406,374	-				+1.1
2,406,425	+				-0.1
2,406,486	-				+0.3
2,406,493	+				+0.7
2,406,494	-				+0.7
2,406,494	-				+0.2
2,406,551	+				-1.3
2,406,551	+				-0.9
2,406,552	-				-0.3
2,406,552	-				+1.1
2,406,600	+				+0.6
2,406,621	+				+0.1
2,406,621	+				-0.0
2,406,621	+				-1.9
2,406,621	+				+0.8
2,406,622	-				-0.1
2,406,622	-				+0.1
2,406,622	-				+0.5
2,406,622	-				-0.7
2,406,731	+		DZA65_RS11320	0.17	+0.1
2,406,732	-		DZA65_RS11320	0.17	-0.7
2,406,732	-		DZA65_RS11320	0.17	+0.1
2,406,732	-		DZA65_RS11320	0.17	+0.9
2,406,784	+		DZA65_RS11320	0.22	-0.6
2,406,784	+		DZA65_RS11320	0.22	-0.1
2,406,785	-		DZA65_RS11320	0.22	+0.1
2,406,807	+		DZA65_RS11320	0.24	+0.4
2,406,808	-		DZA65_RS11320	0.24	+0.4
2,406,808	-		DZA65_RS11320	0.24	-0.6
2,406,808	-		DZA65_RS11320	0.24	+0.8
2,406,851	+		DZA65_RS11320	0.28	-0.7
2,406,851	+		DZA65_RS11320	0.28	-0.6
2,406,851	+		DZA65_RS11320	0.28	+0.9
2,406,852	-		DZA65_RS11320	0.28	-0.2
2,406,852	-		DZA65_RS11320	0.28	+0.1
2,406,907	-		DZA65_RS11320	0.33	+0.6
2,406,907	-		DZA65_RS11320	0.33	+0.1
2,406,907	-		DZA65_RS11320	0.33	-1.9
2,406,907	-		DZA65_RS11320	0.33	-0.1
2,406,943	+		DZA65_RS11320	0.36	+1.0
2,406,944	-		DZA65_RS11320	0.36	+1.4
2,406,948	+		DZA65_RS11320	0.36	+0.7
2,406,948	+		DZA65_RS11320	0.36	+0.7
2,406,948	+		DZA65_RS11320	0.36	+1.5
2,406,948	+		DZA65_RS11320	0.36	+1.1
2,406,948	+		DZA65_RS11320	0.36	-0.2
2,406,949	-				+0.6
2,406,949	-		DZA65_RS11320	0.36	+0.9
2,406,949	-		DZA65_RS11320	0.36	+0.3
2,406,949	-		DZA65_RS11320	0.36	-0.4
2,406,949	-		DZA65_RS11320	0.36	-0.1
2,406,994	+		DZA65_RS11320	0.40	+1.3
2,407,177	+		DZA65_RS11320	0.57	-0.2
2,407,188	+		DZA65_RS11320	0.58	+1.4
2,407,188	+		DZA65_RS11320	0.58	+0.6
2,407,192	+		DZA65_RS11320	0.58	-0.9
2,407,192	+		DZA65_RS11320	0.58	+1.5
2,407,193	-		DZA65_RS11320	0.58	-0.1
2,407,193	-		DZA65_RS11320	0.58	+0.3
2,407,273	+		DZA65_RS11320	0.65	+1.5
2,407,273	+		DZA65_RS11320	0.65	+0.6
2,407,273	+		DZA65_RS11320	0.65	-0.1
2,407,273	+		DZA65_RS11320	0.65	-0.5
2,407,273	+		DZA65_RS11320	0.65	-1.0
2,407,274	-		DZA65_RS11320	0.65	-0.1
2,407,276	-		DZA65_RS11320	0.65	+0.3
2,407,276	-		DZA65_RS11320	0.65	+1.5
2,407,330	-		DZA65_RS11320	0.70	+1.9
2,407,413	-		DZA65_RS11320	0.78	-0.3
2,407,558	+				+1.4
2,407,558	+				-0.3
2,407,576	+				+0.9
2,407,654	+				-0.6
2,407,655	-				-0.0
2,407,655	-				-0.1
2,407,655	-				+0.9
2,407,655	-				+0.3
2,407,655	-				-0.4
2,407,655	-				+0.1
2,407,709	+				+0.6
2,407,709	+				-0.5
2,407,746	-				+1.1
2,407,832	+				-0.5
2,407,832	+				+2.5
2,407,832	+				+0.6
2,407,832	+				-1.3
2,407,832	+				+0.6
2,407,833	-		DZA65_RS11325	0.10	-0.1
2,407,833	-		DZA65_RS11325	0.10	+0.9
2,407,833	-		DZA65_RS11325	0.10	+0.4
2,407,843	-		DZA65_RS11325	0.11	-2.7
2,407,957	+		DZA65_RS11325	0.24	+0.7
2,407,958	-		DZA65_RS11325	0.24	-0.5
2,407,958	-		DZA65_RS11325	0.24	+1.1
2,407,970	-		DZA65_RS11325	0.25	-0.4
2,407,970	-		DZA65_RS11325	0.25	+0.1
2,408,236	-		DZA65_RS11325	0.55	-1.9
2,408,266	-		DZA65_RS11325	0.59	-0.2
2,408,325	+				+1.9
2,408,325	+		DZA65_RS11325	0.65	+0.2
2,408,325	+		DZA65_RS11325	0.65	-0.4
2,408,326	-		DZA65_RS11325	0.65	-0.9
2,408,326	-		DZA65_RS11325	0.65	+0.1
2,408,326	-		DZA65_RS11325	0.65	-1.7
2,408,372	-		DZA65_RS11325	0.70	+0.1
2,408,431	+		DZA65_RS11325	0.77	-1.3
2,408,431	+		DZA65_RS11325	0.77	-0.1
2,408,432	-		DZA65_RS11325	0.77	-0.6
2,408,633	-				+0.6
2,408,655	+				+0.7
2,408,655	+				-1.7
2,408,655	+				-1.2
2,408,655	+				-0.3
2,408,655	+				-0.7
2,408,656	-				-0.1
2,408,656	-				-0.0
2,408,656	-				+1.6
2,408,656	-				+1.5
2,408,656	-				+0.2
2,408,656	-				+0.2
2,408,657	+				-1.4