Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11210

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,373,451	-				+0.7
2,373,451	-				-0.9
2,373,459	+				+0.7
2,373,465	-				+0.1
2,373,571	-		DZA65_RS11200	0.14	-1.9
2,373,659	-		DZA65_RS11200	0.27	-2.2
2,373,662	+		DZA65_RS11200	0.27	-0.3
2,373,663	-		DZA65_RS11200	0.27	+0.8
2,373,680	+		DZA65_RS11200	0.30	-0.3
2,373,750	+		DZA65_RS11200	0.40	-1.4
2,373,751	-		DZA65_RS11200	0.40	+0.3
2,373,848	+		DZA65_RS11200	0.54	+0.6
2,373,895	-		DZA65_RS11200	0.61	+1.9
2,373,902	+		DZA65_RS11200	0.62	-0.5
2,373,914	+		DZA65_RS11200	0.63	+0.8
2,373,914	+		DZA65_RS11200	0.63	-0.4
2,373,915	-		DZA65_RS11200	0.64	+1.5
2,373,964	+		DZA65_RS11200	0.71	+1.2
2,373,965	-		DZA65_RS11200	0.71	+0.9
2,374,017	+		DZA65_RS11200	0.78	-1.5
2,374,017	+		DZA65_RS11200	0.78	+0.0
2,374,019	+		DZA65_RS11200	0.78	+1.5
2,374,019	+		DZA65_RS11200	0.78	+0.3
2,374,019	+		DZA65_RS11200	0.78	+0.5
2,374,071	-		DZA65_RS11200	0.86	-0.7
2,374,088	+		DZA65_RS11200	0.88	-0.7
2,374,088	+		DZA65_RS11200	0.88	+0.4
2,374,089	-		DZA65_RS11200	0.88	+1.0
2,374,090	+				-0.4
2,374,091	-		DZA65_RS11200	0.89	+1.1
2,374,091	-		DZA65_RS11200	0.89	+0.1
2,374,091	-		DZA65_RS11200	0.89	+0.1
2,374,091	-		DZA65_RS11200	0.89	-0.3
2,374,167	+				-0.9
2,374,256	+				-0.6
2,374,256	+				-1.9
2,374,295	-				-1.0
2,374,295	-				+0.6
2,374,295	-				-0.3
2,374,351	+				-0.1
2,374,351	+				-0.5
2,374,352	-				+1.7
2,374,352	-				+2.4
2,374,379	-				-0.1
2,374,497	+		DZA65_RS11210	0.29	+0.6
2,374,498	-		DZA65_RS11210	0.30	+1.1
2,374,498	-		DZA65_RS11210	0.30	+0.7
2,374,727	-				-1.3
2,374,771	+				+0.1
2,374,771	+				+0.1
2,374,772	-				+0.4
2,374,772	-				-0.3
2,374,804	+				-0.1
2,374,815	+				-0.0
2,374,815	+				-0.6
2,374,816	-				-0.0
2,374,824	+				-1.2
2,374,824	+				+0.1
2,374,824	+				-0.1
2,374,824	+				-0.4
2,374,824	+				+0.7
2,374,824	+				+0.6
2,374,824	+				-0.2
2,374,824	+				-0.7
2,374,824	+				-0.1
2,374,824	+				+0.2
2,374,824	+				-0.0
2,374,825	-				-0.4
2,374,825	-				+1.1
2,374,825	-				-0.6
2,374,825	-				-0.6
2,374,850	+				+1.5
2,374,858	-				+0.1
2,374,877	+				+0.0
2,374,877	+				+0.1
2,374,877	+				+0.5
2,374,906	+				+0.3
2,374,906	+				-0.0
2,374,906	+				-0.2
2,374,909	-				-1.2
2,374,925	+				+0.1
2,374,925	+				-0.2
2,374,926	-				-0.2
2,374,959	+				-0.6
2,374,959	+				+0.3
2,374,959	+				-0.9
2,374,960	-				-0.9
2,375,017	+				+0.1
2,375,017	+		DZA65_RS11215	0.11	+0.3
2,375,017	+		DZA65_RS11215	0.11	-0.2
2,375,017	+		DZA65_RS11215	0.11	+0.6
2,375,018	-		DZA65_RS11215	0.11	+0.6
2,375,092	-		DZA65_RS11215	0.15	-1.4
2,375,119	-		DZA65_RS11215	0.16	+0.3
2,375,148	+		DZA65_RS11215	0.18	+2.3
2,375,148	+		DZA65_RS11215	0.18	-0.9
2,375,148	+		DZA65_RS11215	0.18	-0.3
2,375,149	-		DZA65_RS11215	0.18	-0.3
2,375,149	-		DZA65_RS11215	0.18	+1.7
2,375,152	+		DZA65_RS11215	0.18	-0.6
2,375,189	+		DZA65_RS11215	0.20	-0.6
2,375,236	+		DZA65_RS11215	0.22	-0.6
2,375,236	+		DZA65_RS11215	0.22	+0.8
2,375,236	+		DZA65_RS11215	0.22	-0.4
2,375,236	+		DZA65_RS11215	0.22	-0.0
2,375,236	+		DZA65_RS11215	0.22	+0.5
2,375,236	+		DZA65_RS11215	0.22	-0.3
2,375,236	+		DZA65_RS11215	0.22	+0.6
2,375,237	-		DZA65_RS11215	0.23	-0.4
2,375,237	-		DZA65_RS11215	0.23	+2.0
2,375,237	-		DZA65_RS11215	0.23	-1.0
2,375,237	-		DZA65_RS11215	0.23	+0.4
2,375,271	+		DZA65_RS11215	0.24	+0.0
2,375,271	+		DZA65_RS11215	0.24	-0.5
2,375,272	-		DZA65_RS11215	0.24	-1.2
2,375,281	-		DZA65_RS11215	0.25	-1.2
2,375,346	+		DZA65_RS11215	0.28	+0.9
2,375,347	-		DZA65_RS11215	0.28	-0.3
2,375,347	-		DZA65_RS11215	0.28	-0.2
2,375,347	-		DZA65_RS11215	0.28	+0.7
2,375,357	+		DZA65_RS11215	0.29	-0.6
2,375,357	+		DZA65_RS11215	0.29	-0.3
2,375,394	-		DZA65_RS11215	0.31	-0.6
2,375,506	+		DZA65_RS11215	0.37	-0.4
2,375,507	-		DZA65_RS11215	0.37	+0.9
2,375,507	-		DZA65_RS11215	0.37	-0.4
2,375,555	-		DZA65_RS11215	0.40	-0.3
2,375,562	-		DZA65_RS11215	0.40	+0.0
2,375,588	-		DZA65_RS11215	0.41	+0.5
2,375,588	-		DZA65_RS11215	0.41	-0.2
2,375,607	+		DZA65_RS11215	0.42	-1.3
2,375,607	+				-1.4
2,375,607	+		DZA65_RS11215	0.42	+0.7
2,375,607	+		DZA65_RS11215	0.42	+2.1
2,375,608	-		DZA65_RS11215	0.42	-0.6
2,375,634	+		DZA65_RS11215	0.44	-0.1
2,375,634	+		DZA65_RS11215	0.44	+0.7
2,375,634	+		DZA65_RS11215	0.44	+0.3
2,375,634	+				-1.4
2,375,635	-		DZA65_RS11215	0.44	+0.3
2,375,635	-		DZA65_RS11215	0.44	-0.9
2,375,635	-		DZA65_RS11215	0.44	+0.4
2,375,637	+		DZA65_RS11215	0.44	+0.1
2,375,637	+		DZA65_RS11215	0.44	-3.3
2,375,637	+		DZA65_RS11215	0.44	-0.2
2,375,637	+		DZA65_RS11215	0.44	+2.0
2,375,638	-		DZA65_RS11215	0.44	-0.5
2,375,672	+		DZA65_RS11215	0.46	-0.3
2,375,673	-		DZA65_RS11215	0.46	-0.1
2,375,673	-		DZA65_RS11215	0.46	+1.7
2,375,682	+		DZA65_RS11215	0.46	-0.5
2,375,682	+		DZA65_RS11215	0.46	-0.6