Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10850

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,295,915	+		DZA65_RS10845	0.85	+0.8
2,295,915	+		DZA65_RS10845	0.85	-0.3
2,295,916	-		DZA65_RS10845	0.85	+0.6
2,295,916	-		DZA65_RS10845	0.85	+0.6
2,295,918	+		DZA65_RS10845	0.85	-0.1
2,295,919	-		DZA65_RS10845	0.85	-0.7
2,296,008	+		DZA65_RS10845	0.89	-0.4
2,296,039	-		DZA65_RS10845	0.90	-1.6
2,296,039	-		DZA65_RS10845	0.90	+0.1
2,296,039	-		DZA65_RS10845	0.90	+0.2
2,296,039	-		DZA65_RS10845	0.90	+1.0
2,296,054	+				-1.3
2,296,079	+				-0.9
2,296,079	+				-1.2
2,296,079	+				-0.3
2,296,080	-				+1.0
2,296,088	+				-0.1
2,296,088	+				+0.1
2,296,088	+				-0.3
2,296,088	+				-0.2
2,296,088	+				-0.7
2,296,088	+				+0.6
2,296,088	+				-0.1
2,296,088	+				-0.3
2,296,088	+				-0.1
2,296,088	+				+1.0
2,296,088	+				+0.6
2,296,088	+				+0.5
2,296,089	-				+0.5
2,296,089	-				+0.1
2,296,089	-				-0.3
2,296,089	-				+0.4
2,296,089	-				-0.4
2,296,089	-				-0.3
2,296,089	-				+0.5
2,296,089	-				-1.2
2,296,089	-				+1.3
2,296,089	-				+0.1
2,296,089	-				+0.3
2,296,089	-				+1.2
2,296,094	+				-1.1
2,296,094	+				+1.1
2,296,094	+				-0.6
2,296,177	+				-0.3
2,296,178	-				+1.0
2,296,178	-				+0.2
2,296,179	+				-0.4
2,296,180	-				-1.9
2,296,291	-				-0.5
2,296,309	+				-0.0
2,296,317	+				-1.4
2,296,318	-				-0.4
2,296,330	+				-1.8
2,296,330	+				+0.2
2,296,330	+				+1.4
2,296,331	-				+0.0
2,296,336	+				-1.9
2,296,377	-				+0.4
2,296,378	+				+2.1
2,296,378	+				-1.2
2,296,379	-				+0.5
2,296,379	-				+0.7
2,296,379	-				+0.1
2,296,379	-				-0.3
2,296,379	-				+0.1
2,296,382	+				+0.1
2,296,382	+				+0.1
2,296,383	-				-0.5
2,296,383	-				+1.6
2,296,385	+				+0.4
2,296,386	-				+0.7
2,296,386	-				+0.2
2,296,386	-				-1.2
2,296,467	+				+1.0
2,296,498	+				+0.0
2,296,498	+				-0.9
2,296,550	+				-0.4
2,296,648	+				-2.8
2,296,690	+				-1.3
2,296,691	-				+0.2
2,296,693	+				+0.1
2,296,694	-				-0.3
2,296,694	-				-0.3
2,296,705	+				+0.2
2,296,706	-				-0.1
2,296,746	-				-1.4
2,296,746	-				-0.6
2,296,749	+				+1.4
2,296,782	+				-1.0
2,296,782	+				+0.1
2,296,782	+				+0.6
2,296,787	+				-0.0
2,296,788	-				+0.7
2,296,788	-				+0.6
2,296,792	+				+1.7
2,296,793	-				-0.2
2,296,793	-				-0.3
2,296,821	+				-1.3
2,296,895	+				+0.2
2,296,951	+		DZA65_RS10850	0.13	-0.6
2,296,952	-		DZA65_RS10850	0.13	+1.0
2,296,952	-		DZA65_RS10850	0.13	+0.9
2,296,952	-		DZA65_RS10850	0.13	-1.2
2,296,960	+		DZA65_RS10850	0.15	+0.1
2,296,961	-		DZA65_RS10850	0.15	+0.0
2,296,961	-		DZA65_RS10850	0.15	-1.4
2,296,973	+		DZA65_RS10850	0.17	+0.7
2,297,003	-		DZA65_RS10850	0.21	+0.8
2,297,127	+		DZA65_RS10850	0.41	+0.5
2,297,128	-		DZA65_RS10850	0.41	+0.4
2,297,137	+		DZA65_RS10850	0.42	+1.1
2,297,137	+		DZA65_RS10850	0.42	+0.2
2,297,137	+		DZA65_RS10850	0.42	+0.9
2,297,137	+		DZA65_RS10850	0.42	+0.1
2,297,138	-		DZA65_RS10850	0.42	+0.6
2,297,138	-		DZA65_RS10850	0.42	-0.1
2,297,171	-		DZA65_RS10850	0.47	+0.9
2,297,171	-		DZA65_RS10850	0.47	+1.0
2,297,171	-		DZA65_RS10850	0.47	-1.4
2,297,171	-		DZA65_RS10850	0.47	+0.2
2,297,171	-		DZA65_RS10850	0.47	-0.1
2,297,411	-		DZA65_RS10850	0.85	+0.1
2,297,414	-		DZA65_RS10850	0.85	-0.1
2,297,414	-		DZA65_RS10850	0.85	+1.0
2,297,523	+				+0.1
2,297,552	-				+0.3
2,297,603	+				-0.2
2,297,604	-				-2.4
2,297,604	-				+1.6
2,297,634	-				-1.3
2,297,635	+				-0.3
2,297,640	+				+0.3
2,297,640	+				+0.1
2,297,665	+				+0.4
2,297,666	-				+1.1
2,297,682	-				+1.4
2,297,718	+				+0.7
2,297,776	+				+1.3
2,297,776	+				+1.1
2,297,776	+				-0.2
2,297,777	-				-1.9
2,297,796	+				-0.6
2,297,821	-				-1.4
2,297,838	-				-2.2
2,297,841	+				+1.1
2,297,842	-				-0.3
2,297,910	+				-0.2
2,297,985	-				+0.3
2,298,027	-				-0.6
2,298,027	-				+0.1
2,298,042	+				+0.1
2,298,099	+				+0.1
2,298,100	-				+0.6
2,298,189	+				+0.6
2,298,233	+				+0.1
2,298,233	+				+0.4
2,298,234	-				-0.6
2,298,234	-				+0.1
2,298,234	-				+0.7
2,298,234	-				+0.9
2,298,234	-				-1.7
2,298,234	-				-0.2
2,298,234	-				+0.3
2,298,254	+				-1.4
2,298,254	+				+1.1
2,298,255	-				-0.1
2,298,449	+				-1.4
2,298,449	+				+0.1
2,298,449	+				+0.1
2,298,458	+				-0.3
2,298,460	+				+0.4
2,298,460	+				-0.6
2,298,460	+				-0.9
2,298,460	+				-0.4
2,298,460	+				-0.3
2,298,460	+				+0.7
2,298,460	+				+0.7
2,298,460	+				-0.5
2,298,460	+				-0.1
2,298,460	+				+1.3
2,298,460	+				+1.7