Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10745

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,273,491	+				+0.9
2,273,492	-				-0.5
2,273,502	+				-2.4
2,273,502	+				+0.6
2,273,524	+				+0.5
2,273,533	+				-0.4
2,273,546	+				+0.1
2,273,546	+				-0.6
2,273,546	+				+0.6
2,273,546	+				+0.9
2,273,547	-				-2.0
2,273,547	-				+0.8
2,273,563	+				-0.3
2,273,563	+				+0.1
2,273,563	+				-0.0
2,273,566	+				-0.5
2,273,566	+				-0.3
2,273,566	+				-0.0
2,273,595	-				+0.9
2,273,697	-		DZA65_RS10740	0.17	-0.2
2,273,772	+		DZA65_RS10740	0.26	+0.2
2,273,772	+		DZA65_RS10740	0.26	-1.6
2,273,773	-		DZA65_RS10740	0.26	-1.4
2,273,773	-		DZA65_RS10740	0.26	-0.1
2,273,773	-		DZA65_RS10740	0.26	+0.9
2,273,798	+		DZA65_RS10740	0.29	-0.5
2,273,798	+		DZA65_RS10740	0.29	-0.2
2,273,798	+				+0.6
2,273,837	+		DZA65_RS10740	0.34	-0.3
2,273,837	+		DZA65_RS10740	0.34	-0.7
2,273,838	-		DZA65_RS10740	0.34	-1.0
2,273,862	+		DZA65_RS10740	0.37	+0.3
2,273,862	+		DZA65_RS10740	0.37	-0.1
2,273,863	-		DZA65_RS10740	0.37	+0.4
2,273,863	-		DZA65_RS10740	0.37	-1.0
2,273,863	-		DZA65_RS10740	0.37	-1.4
2,273,863	-		DZA65_RS10740	0.37	-0.2
2,273,864	+		DZA65_RS10740	0.37	-0.3
2,273,865	-		DZA65_RS10740	0.37	-0.0
2,273,874	+		DZA65_RS10740	0.38	+1.0
2,273,875	-		DZA65_RS10740	0.38	-0.6
2,274,048	+		DZA65_RS10740	0.58	-0.9
2,274,048	+		DZA65_RS10740	0.58	+0.6
2,274,049	-		DZA65_RS10740	0.59	-1.4
2,274,049	-		DZA65_RS10740	0.59	+0.3
2,274,049	-		DZA65_RS10740	0.59	-0.3
2,274,075	+		DZA65_RS10740	0.62	-0.9
2,274,076	-		DZA65_RS10740	0.62	-0.1
2,274,123	+		DZA65_RS10740	0.67	+0.1
2,274,123	+		DZA65_RS10740	0.67	+0.7
2,274,123	+		DZA65_RS10740	0.67	-0.6
2,274,151	+		DZA65_RS10740	0.71	-0.5
2,274,152	-		DZA65_RS10740	0.71	-1.4
2,274,152	-		DZA65_RS10740	0.71	-1.2
2,274,168	-		DZA65_RS10740	0.73	-0.3
2,274,278	+		DZA65_RS10740	0.85	-1.6
2,274,347	-				-0.7
2,274,360	+				-1.1
2,274,399	+				+1.5
2,274,400	-				+0.2
2,274,400	-				-1.9
2,274,400	-				+0.3
2,274,431	-				+1.1
2,274,441	+				+0.7
2,274,441	+				-0.3
2,274,441	+				-1.0
2,274,442	-				+0.8
2,274,442	-				-0.2
2,274,442	-				-0.4
2,274,444	-				-2.4
2,274,455	+				-0.1
2,274,455	+				-0.4
2,274,455	+				-0.3
2,274,455	+				+0.9
2,274,456	-				+1.0
2,274,456	-				-0.9
2,274,456	-				+0.1
2,274,457	+				+1.3
2,274,457	+				+1.3
2,274,458	-				-1.9
2,274,466	-				+0.9
2,274,490	+				+0.6
2,274,491	-				+0.1
2,274,713	-		DZA65_RS10745	0.29	+0.7
2,274,713	-		DZA65_RS10745	0.29	+0.7
2,274,714	+		DZA65_RS10745	0.29	+0.3
2,274,714	+		DZA65_RS10745	0.29	+1.1
2,274,714	+		DZA65_RS10745	0.29	+1.1
2,274,714	+		DZA65_RS10745	0.29	+0.4
2,274,714	+		DZA65_RS10745	0.29	+0.7
2,274,714	+		DZA65_RS10745	0.29	+0.2
2,274,715	-		DZA65_RS10745	0.29	-0.5
2,274,715	-		DZA65_RS10745	0.29	+0.4
2,274,715	-		DZA65_RS10745	0.29	+0.6
2,274,715	-		DZA65_RS10745	0.29	+0.4
2,274,715	-		DZA65_RS10745	0.29	-0.3
2,274,715	-		DZA65_RS10745	0.29	+0.6
2,274,715	-		DZA65_RS10745	0.29	-0.1
2,274,790	+		DZA65_RS10745	0.37	-1.3
2,274,829	+		DZA65_RS10745	0.42	+0.7
2,274,846	+		DZA65_RS10745	0.44	-0.8
2,274,846	+		DZA65_RS10745	0.44	-1.1
2,274,846	+		DZA65_RS10745	0.44	+0.8
2,274,847	-		DZA65_RS10745	0.44	+0.1
2,274,847	-		DZA65_RS10745	0.44	+0.4
2,274,850	+		DZA65_RS10745	0.44	-0.4
2,274,850	+		DZA65_RS10745	0.44	+1.3
2,274,850	+		DZA65_RS10745	0.44	-0.5
2,274,850	+		DZA65_RS10745	0.44	+1.0
2,274,851	-		DZA65_RS10745	0.44	+0.3
2,274,851	-				+1.4
2,274,851	-		DZA65_RS10745	0.44	+1.3
2,274,851	-		DZA65_RS10745	0.44	-1.4
2,274,851	-		DZA65_RS10745	0.44	-0.3
2,274,874	-		DZA65_RS10745	0.47	+0.7
2,274,917	+		DZA65_RS10745	0.52	-1.9
2,274,918	-		DZA65_RS10745	0.52	+1.5
2,274,941	-		DZA65_RS10745	0.55	+0.6
2,275,164	-		DZA65_RS10745	0.80	+0.5
2,275,193	-		DZA65_RS10745	0.84	+0.5
2,275,304	-				+2.0
2,275,327	+				-0.3
2,275,327	+				+0.1
2,275,340	-				+0.8
2,275,340	-				-0.4
2,275,367	+				+0.1
2,275,367	+				-0.9
2,275,367	+				-1.7
2,275,368	-				-0.7
2,275,369	+				+0.8
2,275,370	-				+0.0
2,275,374	+				-0.1
2,275,374	+				+0.5
2,275,374	+				+0.3
2,275,374	+				+0.5
2,275,375	-				-0.4
2,275,395	+				+0.4
2,275,395	+				+0.6
2,275,396	-				+1.1
2,275,396	-				-0.6
2,275,396	-				-0.4
2,275,436	+				+0.4
2,275,437	-				-0.5
2,275,437	-				-0.1
2,275,445	+				+0.2
2,275,445	+				+0.0
2,275,445	+				+0.7
2,275,445	+				+0.1
2,275,447	+				-0.9
2,275,447	+				-0.9
2,275,447	+				+0.7
2,275,447	+				-0.6
2,275,447	+				-0.5
2,275,447	+				-0.1
2,275,447	+				-0.4
2,275,447	+				-0.4
2,275,447	+				+0.0
2,275,449	+				+0.7
2,275,449	+				-1.9
2,275,449	+				+0.6
2,275,449	+				-0.6
2,275,449	+				+1.0
2,275,449	+				-0.0
2,275,450	-				-0.7
2,275,450	-				+0.1
2,275,450	-				-0.3
2,275,506	+				-1.0
2,275,506	+				+1.5
2,275,506	+				+0.6
2,275,507	-				-2.0
2,275,507	-				-0.7