Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,187,478	-		DZA65_RS10340	0.54	-2.8
2,187,525	+		DZA65_RS10340	0.62	+0.1
2,187,525	+		DZA65_RS10340	0.62	-1.5
2,187,525	+				-0.8
2,187,525	+		DZA65_RS10340	0.62	-0.3
2,187,525	+		DZA65_RS10340	0.62	-0.7
2,187,525	+		DZA65_RS10340	0.62	-0.4
2,187,526	-		DZA65_RS10340	0.62	-1.0
2,187,526	-		DZA65_RS10340	0.62	-0.8
2,187,526	-		DZA65_RS10340	0.62	-0.7
2,187,526	-		DZA65_RS10340	0.62	+0.2
2,187,552	+		DZA65_RS10340	0.67	-0.3
2,187,552	+		DZA65_RS10340	0.67	-0.4
2,187,553	-		DZA65_RS10340	0.67	+0.9
2,187,553	-		DZA65_RS10340	0.67	+0.6
2,187,553	-		DZA65_RS10340	0.67	+0.3
2,187,572	+		DZA65_RS10340	0.70	+0.2
2,187,572	+		DZA65_RS10340	0.70	-2.0
2,187,572	+		DZA65_RS10340	0.70	-0.0
2,187,572	+		DZA65_RS10340	0.70	+0.1
2,187,572	+		DZA65_RS10340	0.70	+0.6
2,187,572	+		DZA65_RS10340	0.70	-0.3
2,187,572	+		DZA65_RS10340	0.70	-0.6
2,187,572	+		DZA65_RS10340	0.70	+0.8
2,187,572	+		DZA65_RS10340	0.70	+0.3
2,187,572	+		DZA65_RS10340	0.70	-0.2
2,187,572	+				-0.4
2,187,572	+		DZA65_RS10340	0.70	-0.5
2,187,573	-		DZA65_RS10340	0.70	-1.1
2,187,573	-		DZA65_RS10340	0.70	+0.1
2,187,573	-		DZA65_RS10340	0.70	-1.1
2,187,573	-		DZA65_RS10340	0.70	+0.6
2,187,573	-		DZA65_RS10340	0.70	-0.1
2,187,573	-		DZA65_RS10340	0.70	-0.3
2,187,573	-		DZA65_RS10340	0.70	-1.0
2,187,573	-		DZA65_RS10340	0.70	-0.5
2,187,573	-		DZA65_RS10340	0.70	-3.5
2,187,573	-		DZA65_RS10340	0.70	+1.3
2,187,573	-		DZA65_RS10340	0.70	+0.0
2,187,590	+		DZA65_RS10340	0.73	-1.8
2,187,590	+		DZA65_RS10340	0.73	+0.4
2,187,591	-		DZA65_RS10340	0.73	+0.0
2,187,591	-		DZA65_RS10340	0.73	+0.5
2,187,591	-		DZA65_RS10340	0.73	-0.0
2,187,591	-		DZA65_RS10340	0.73	+1.1
2,187,591	-		DZA65_RS10340	0.73	+0.4
2,187,594	+		DZA65_RS10340	0.74	+1.0
2,187,594	+		DZA65_RS10340	0.74	+0.4
2,187,594	+		DZA65_RS10340	0.74	-0.4
2,187,594	+		DZA65_RS10340	0.74	-0.4
2,187,594	+		DZA65_RS10340	0.74	-0.3
2,187,594	+		DZA65_RS10340	0.74	+0.7
2,187,594	+		DZA65_RS10340	0.74	-0.5
2,187,594	+		DZA65_RS10340	0.74	+0.8
2,187,594	+		DZA65_RS10340	0.74	+0.2
2,187,594	+		DZA65_RS10340	0.74	+0.4
2,187,594	+		DZA65_RS10340	0.74	-1.5
2,187,594	+		DZA65_RS10340	0.74	+0.8
2,187,595	-		DZA65_RS10340	0.74	+0.5
2,187,595	-		DZA65_RS10340	0.74	-0.5
2,187,595	-		DZA65_RS10340	0.74	-0.8
2,187,595	-		DZA65_RS10340	0.74	-0.2
2,187,595	-		DZA65_RS10340	0.74	-0.8
2,187,595	-		DZA65_RS10340	0.74	-3.0
2,187,595	-		DZA65_RS10340	0.74	+0.2
2,187,595	-		DZA65_RS10340	0.74	+0.2
2,187,595	-		DZA65_RS10340	0.74	-2.4
2,187,596	+		DZA65_RS10340	0.74	-2.6
2,187,596	+		DZA65_RS10340	0.74	-0.8
2,187,596	+		DZA65_RS10340	0.74	-0.1
2,187,597	-		DZA65_RS10340	0.74	-3.1
2,187,597	-		DZA65_RS10340	0.74	-0.2
2,187,597	-		DZA65_RS10340	0.74	-0.0
2,187,670	-		DZA65_RS10340	0.87	+0.3
2,187,722	+				-0.8
2,187,778	+				-0.8
2,187,778	+				-0.4
2,187,778	+				+0.6
2,187,850	+		DZA65_RS10345	0.12	-0.5
2,188,012	+		DZA65_RS10345	0.37	-0.2
2,188,012	+		DZA65_RS10345	0.37	+0.4
2,188,012	+		DZA65_RS10345	0.37	+0.3
2,188,012	+		DZA65_RS10345	0.37	-0.8
2,188,012	+		DZA65_RS10345	0.37	-0.2
2,188,012	+		DZA65_RS10345	0.37	-0.9
2,188,012	+		DZA65_RS10345	0.37	+0.4
2,188,013	-		DZA65_RS10345	0.37	+0.0
2,188,013	-		DZA65_RS10345	0.37	+1.5
2,188,144	+		DZA65_RS10345	0.58	-1.1
2,188,144	+		DZA65_RS10345	0.58	-0.1
2,188,145	-		DZA65_RS10345	0.58	-0.7
2,188,145	-		DZA65_RS10345	0.58	-3.3
2,188,145	-				+0.2
2,188,452	-				-1.0
2,188,465	+				-0.1
2,188,509	+				-0.4
2,188,509	+				-1.9
2,188,509	+				-1.3
2,188,509	+				-0.1
2,188,510	-				-0.8
2,188,510	-				-0.3
2,188,510	-				+0.9
2,188,510	-				-0.5
2,188,517	+				+1.2
2,188,518	-				+0.5
2,188,660	+		DZA65_RS10350	0.22	-0.2
2,188,661	-		DZA65_RS10350	0.22	+2.2
2,188,661	-		DZA65_RS10350	0.22	+0.5
2,188,725	+		DZA65_RS10350	0.29	+0.2
2,188,725	+		DZA65_RS10350	0.29	-0.0
2,188,725	+		DZA65_RS10350	0.29	+0.5
2,188,725	+		DZA65_RS10350	0.29	+0.5
2,188,725	+		DZA65_RS10350	0.29	+0.2
2,188,725	+		DZA65_RS10350	0.29	+0.9
2,188,725	+		DZA65_RS10350	0.29	+0.2
2,188,725	+		DZA65_RS10350	0.29	+0.4
2,188,726	-		DZA65_RS10350	0.29	-0.5
2,188,726	-		DZA65_RS10350	0.29	+1.3
2,188,726	-		DZA65_RS10350	0.29	+0.2
2,188,726	-		DZA65_RS10350	0.29	-1.1
2,188,726	-		DZA65_RS10350	0.29	-0.0
2,188,726	-		DZA65_RS10350	0.29	-0.0
2,188,839	+		DZA65_RS10350	0.42	+0.7
2,188,840	-		DZA65_RS10350	0.42	+0.5
2,188,907	+		DZA65_RS10350	0.49	+1.1
2,188,932	-		DZA65_RS10350	0.52	-1.2
2,188,948	-		DZA65_RS10350	0.53	+0.1
2,189,052	+		DZA65_RS10350	0.65	+0.2
2,189,052	+		DZA65_RS10350	0.65	+0.7
2,189,053	-		DZA65_RS10350	0.65	+0.6
2,189,172	-		DZA65_RS10350	0.78	-0.1