Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10095

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,137,393	-		DZA65_RS10090	0.34	+1.8
2,137,393	-		DZA65_RS10090	0.34	-1.5
2,137,455	+		DZA65_RS10090	0.38	-0.3
2,137,456	-		DZA65_RS10090	0.38	-0.5
2,137,456	-		DZA65_RS10090	0.38	+0.1
2,137,456	-		DZA65_RS10090	0.38	+0.3
2,137,569	+				-2.1
2,137,570	-		DZA65_RS10090	0.46	+0.3
2,137,570	-		DZA65_RS10090	0.46	+1.0
2,137,666	-		DZA65_RS10090	0.54	+0.1
2,137,816	+		DZA65_RS10090	0.64	-0.2
2,137,816	+		DZA65_RS10090	0.64	-1.0
2,137,816	+		DZA65_RS10090	0.64	-0.7
2,137,816	+		DZA65_RS10090	0.64	-0.1
2,137,816	+		DZA65_RS10090	0.64	+0.2
2,137,817	-		DZA65_RS10090	0.65	+0.1
2,137,817	-		DZA65_RS10090	0.65	+0.1
2,137,817	-		DZA65_RS10090	0.65	+0.6
2,137,817	-		DZA65_RS10090	0.65	+1.8
2,137,817	-		DZA65_RS10090	0.65	+0.6
2,137,817	-		DZA65_RS10090	0.65	+1.3
2,137,817	-		DZA65_RS10090	0.65	+0.2
2,137,817	-		DZA65_RS10090	0.65	-0.5
2,137,817	-		DZA65_RS10090	0.65	-1.1
2,137,828	-		DZA65_RS10090	0.65	-0.7
2,137,902	+		DZA65_RS10090	0.71	-1.1
2,137,903	-		DZA65_RS10090	0.71	-1.1
2,137,946	-		DZA65_RS10090	0.74	-0.8
2,138,025	-		DZA65_RS10090	0.80	-0.2
2,138,025	-		DZA65_RS10090	0.80	-0.8
2,138,025	-		DZA65_RS10090	0.80	+0.2
2,138,044	-		DZA65_RS10090	0.81	+0.9
2,138,070	-		DZA65_RS10090	0.83	-1.8
2,138,070	-		DZA65_RS10090	0.83	+1.2
2,138,116	-		DZA65_RS10090	0.86	+0.2
2,138,184	+				-0.1
2,138,205	+				-2.8
2,138,307	+				-2.3
2,138,308	-				-1.1
2,138,308	-				-0.5
2,138,308	-				+0.8
2,138,308	-				+0.4
2,138,326	-				-0.3
2,138,348	+				-1.8
2,138,348	+				-0.1
2,138,349	-				+0.1
2,138,349	-				-0.1
2,138,353	-				-0.7
2,138,366	+				+0.5
2,138,366	+				+0.5
2,138,367	-				-1.0
2,138,367	-				+0.1
2,138,367	-				-0.5
2,138,482	+		DZA65_RS10095	0.13	-1.3
2,138,482	+		DZA65_RS10095	0.13	-1.1
2,138,483	-		DZA65_RS10095	0.13	-1.1
2,138,610	+		DZA65_RS10095	0.27	-0.2
2,138,610	+		DZA65_RS10095	0.27	-0.3
2,138,610	+		DZA65_RS10095	0.27	-1.4
2,138,719	-		DZA65_RS10095	0.40	-2.5
2,138,736	+		DZA65_RS10095	0.42	-0.4
2,138,737	-		DZA65_RS10095	0.42	-0.2
2,138,826	+		DZA65_RS10095	0.52	-0.1
2,138,826	+		DZA65_RS10095	0.52	-2.8
2,138,826	+		DZA65_RS10095	0.52	-2.1
2,138,826	+		DZA65_RS10095	0.52	-0.8
2,138,827	-		DZA65_RS10095	0.52	-2.5
2,138,827	-		DZA65_RS10095	0.52	-0.8
2,138,827	-		DZA65_RS10095	0.52	-0.2
2,138,827	-		DZA65_RS10095	0.52	-1.0
2,138,827	-		DZA65_RS10095	0.52	+0.6
2,138,911	-				+0.8
2,138,960	+		DZA65_RS10095	0.67	-0.8
2,138,961	-		DZA65_RS10095	0.67	-1.8
2,138,961	-		DZA65_RS10095	0.67	-0.1
2,138,961	-		DZA65_RS10095	0.67	-1.8
2,138,961	-		DZA65_RS10095	0.67	+0.1
2,138,964	+		DZA65_RS10095	0.67	-0.1
2,138,965	-		DZA65_RS10095	0.68	+0.7
2,138,965	-		DZA65_RS10095	0.68	+0.1
2,139,036	+		DZA65_RS10095	0.76	+0.2
2,139,036	+		DZA65_RS10095	0.76	-0.8
2,139,036	+		DZA65_RS10095	0.76	-1.1
2,139,036	+				-0.4
2,139,036	+		DZA65_RS10095	0.76	-1.8
2,139,037	-		DZA65_RS10095	0.76	+0.1
2,139,037	-		DZA65_RS10095	0.76	-0.1
2,139,321	-				+1.8
2,139,321	-				-1.4
2,139,337	+				-1.4
2,139,357	+				-0.2
2,139,357	+				+0.1
2,139,357	+				-0.6
2,139,358	-				-0.8
2,139,358	-				-0.2
2,139,358	-				+0.5
2,139,374	+				-1.9
2,139,375	-				-0.6
2,139,375	-				-1.8
2,139,375	-				-0.1
2,139,375	-				+0.5
2,139,375	-				+0.6
2,139,442	+				-1.0
2,139,443	-				+1.3
2,139,451	+				-1.1
2,139,451	+				-0.2
2,139,452	-				-0.2
2,139,452	-				+0.0
2,139,495	-		DZA65_RS10100	0.14	+1.4
2,139,553	+		DZA65_RS10100	0.19	+0.3
2,139,554	-		DZA65_RS10100	0.19	+0.1
2,139,644	+		DZA65_RS10100	0.28	+0.1
2,139,649	-		DZA65_RS10100	0.28	-0.0
2,139,649	-		DZA65_RS10100	0.28	+0.3
2,139,709	-		DZA65_RS10100	0.34	-1.1
2,139,709	-		DZA65_RS10100	0.34	+0.9
2,139,759	+		DZA65_RS10100	0.39	+0.2
2,139,760	-		DZA65_RS10100	0.39	-0.1
2,139,760	-		DZA65_RS10100	0.39	+0.4
2,139,850	-		DZA65_RS10100	0.48	-0.5
2,139,890	+		DZA65_RS10100	0.51	+0.7
2,139,890	+		DZA65_RS10100	0.51	+0.1
2,140,002	+		DZA65_RS10100	0.62	-0.5
2,140,002	+		DZA65_RS10100	0.62	-0.6
2,140,002	+		DZA65_RS10100	0.62	+0.9
2,140,003	-		DZA65_RS10100	0.62	-0.5
2,140,003	-		DZA65_RS10100	0.62	-3.1
2,140,003	-		DZA65_RS10100	0.62	+1.1
2,140,003	-		DZA65_RS10100	0.62	-1.3
2,140,003	-		DZA65_RS10100	0.62	-0.5
2,140,003	-		DZA65_RS10100	0.62	+0.9
2,140,055	+		DZA65_RS10100	0.67	-0.3
2,140,102	-		DZA65_RS10100	0.72	-0.8
2,140,102	-		DZA65_RS10100	0.72	-0.3
2,140,173	+		DZA65_RS10100	0.78	-0.4
2,140,173	+				+0.6
2,140,173	+		DZA65_RS10100	0.78	+0.9
2,140,173	+		DZA65_RS10100	0.78	+0.6
2,140,173	+		DZA65_RS10100	0.78	-0.3
2,140,174	-		DZA65_RS10100	0.79	+0.6
2,140,174	-		DZA65_RS10100	0.79	-0.1
2,140,174	-		DZA65_RS10100	0.79	-0.3
2,140,175	+		DZA65_RS10100	0.79	-1.0
2,140,176	-		DZA65_RS10100	0.79	-0.8